RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 USP17L8P0C7I0 530 aa15.21■□□□□ 0.03
SMARCD3-213ENST00000489503 ZNF280AP59817 542 aaPredicted RBP15.21■□□□□ 0.03
SMARCD3-213ENST00000489503 PDE3AQ14432 1141 aa15.21■□□□□ 0.03
SMARCD3-213ENST00000489503 DLK2Q6UY11 383 aa15.21■□□□□ 0.03
SMARCD3-213ENST00000489503 CNTROBQ8N137 903 aa15.21■□□□□ 0.03
SMARCD3-213ENST00000489503 LPIN2Q92539 896 aa15.21■□□□□ 0.03
SMARCD3-213ENST00000489503 ZBTB40Q9NUA8 1239 aa15.21■□□□□ 0.03
SMARCD3-213ENST00000489503 MYO3BQ8WXR4 1341 aa15.2■□□□□ 0.02
SMARCD3-213ENST00000489503 PASKQ96RG2 1323 aa15.2■□□□□ 0.02
SMARCD3-213ENST00000489503 SURF6O75683 361 aaKnown RBP15.2■□□□□ 0.02
SMARCD3-213ENST00000489503 SASH1O94885 1247 aa15.2■□□□□ 0.02
SMARCD3-213ENST00000489503 ITGBL1O95965 494 aaPredicted RBP15.2■□□□□ 0.02
SMARCD3-213ENST00000489503 PHKA1P46020 1223 aa15.2■□□□□ 0.02
SMARCD3-213ENST00000489503 G3BP1Q13283 466 aaKnown RBP eCLIP15.2■□□□□ 0.02
SMARCD3-213ENST00000489503 OS9Q13438 667 aaPredicted RBP15.2■□□□□ 0.02
SMARCD3-213ENST00000489503 GRIK5Q16478 980 aa15.2■□□□□ 0.02
SMARCD3-213ENST00000489503 CAVIN4Q5BKX8 364 aa15.2■□□□□ 0.02
SMARCD3-213ENST00000489503 GLIS2Q9BZE0 524 aaPredicted RBP15.2■□□□□ 0.02
SMARCD3-213ENST00000489503 MYOZ2Q9NPC6 264 aa15.2■□□□□ 0.02
SMARCD3-213ENST00000489503 PCDHAC2Q9Y5I4 1007 aa15.2■□□□□ 0.02
SMARCD3-213ENST00000489503 FAM205AQ6ZU69 1335 aa15.19■□□□□ 0.02
SMARCD3-213ENST00000489503 POLR2AP24928 1970 aaKnown RBP15.19■□□□□ 0.02
SMARCD3-213ENST00000489503 A0A1B0GUL7 405 aa15.19■□□□□ 0.02
SMARCD3-213ENST00000489503 TIMM10P62072 90 aa15.19■□□□□ 0.02
SMARCD3-213ENST00000489503 GGA3Q9NZ52 723 aa15.19■□□□□ 0.02
SMARCD3-213ENST00000489503 SCAF8Q9UPN6 1271 aaKnown RBP15.19■□□□□ 0.02
SMARCD3-213ENST00000489503 ADM5C9JUS6 153 aa15.18■□□□□ 0.02
SMARCD3-213ENST00000489503 FRAT2O75474 233 aaPredicted RBP15.18■□□□□ 0.02
SMARCD3-213ENST00000489503 APLP1P51693 650 aa15.18■□□□□ 0.02
SMARCD3-213ENST00000489503 MFSD14BQ5SR56 506 aa15.18■□□□□ 0.02
SMARCD3-213ENST00000489503 SIRT2Q8IXJ6 389 aa15.18■□□□□ 0.02
SMARCD3-213ENST00000489503 EXOC6BQ9Y2D4 811 aa15.18■□□□□ 0.02
SMARCD3-213ENST00000489503 AOX1Q06278 1338 aa15.17■□□□□ 0.02
SMARCD3-213ENST00000489503 TRPM7Q96QT4 1865 aa15.17■□□□□ 0.02
SMARCD3-213ENST00000489503 SCARF1Q14162 830 aa15.17■□□□□ 0.02
SMARCD3-213ENST00000489503 NBPF9Q3BBW0 867 aa15.17■□□□□ 0.02
SMARCD3-213ENST00000489503 XAGE2Q96GT9 111 aa15.17■□□□□ 0.02
SMARCD3-213ENST00000489503 NEUROD6Q96NK8 337 aa15.17■□□□□ 0.02
SMARCD3-213ENST00000489503 APBB1O00213 710 aa15.16■□□□□ 0.02
SMARCD3-213ENST00000489503 ANGEL2Q5VTE6 544 aaKnown RBP15.16■□□□□ 0.02
SMARCD3-213ENST00000489503 CCDC102BQ68D86 513 aa15.16■□□□□ 0.02
SMARCD3-213ENST00000489503 USP48Q86UV5 1035 aa15.16■□□□□ 0.02
SMARCD3-213ENST00000489503 OGFOD1Q8N543 542 aa15.16■□□□□ 0.02
SMARCD3-213ENST00000489503 CRBNQ96SW2 442 aa15.16■□□□□ 0.02
SMARCD3-213ENST00000489503 PGAP2Q9UHJ9 254 aa15.16■□□□□ 0.02
SMARCD3-213ENST00000489503 NOP58Q9Y2X3 529 aaKnown RBP15.16■□□□□ 0.02
SMARCD3-213ENST00000489503 ZC3H15Q8WU90 426 aaKnown RBP15.15■□□□□ 0.02
SMARCD3-213ENST00000489503 HDAC9Q9UKV0 1011 aa15.15■□□□□ 0.02
SMARCD3-213ENST00000489503 TTF2Q9UNY4 1162 aaKnown RBP15.15■□□□□ 0.02
SMARCD3-213ENST00000489503 AKAP2Q9Y2D5 859 aa15.15■□□□□ 0.02
SMARCD3-213ENST00000489503 ECM29Q5VYK3 1845 aa15.15■□□□□ 0.02
SMARCD3-213ENST00000489503 WNT10BO00744 389 aa15.14■□□□□ 0.01
SMARCD3-213ENST00000489503 FKBP1AP62942 108 aaKnown RBP15.14■□□□□ 0.01
SMARCD3-213ENST00000489503 CFAP100Q494V2 611 aa15.14■□□□□ 0.01
SMARCD3-213ENST00000489503 TNNI3KQ59H18 835 aa15.14■□□□□ 0.01
SMARCD3-213ENST00000489503 KRT26Q7Z3Y9 468 aa15.14■□□□□ 0.01
SMARCD3-213ENST00000489503 DBNDD2Q9BQY9 259 aa15.14■□□□□ 0.01
SMARCD3-213ENST00000489503 BCL11AQ9H165 835 aa15.14■□□□□ 0.01
SMARCD3-213ENST00000489503 ZNF408Q9H9D4 720 aa15.14■□□□□ 0.01
SMARCD3-213ENST00000489503 TLR7Q9NYK1 1049 aaKnown RBP15.14■□□□□ 0.01
SMARCD3-213ENST00000489503 FPGT-TNNI3KV9GXZ4 949 aa15.14■□□□□ 0.01
SMARCD3-213ENST00000489503 RASGRF1Q13972 1273 aa15.13■□□□□ 0.01
SMARCD3-213ENST00000489503 PI16Q6UXB8 463 aa15.13■□□□□ 0.01
SMARCD3-213ENST00000489503 RPAP2Q8IXW5 612 aaPredicted RBP15.13■□□□□ 0.01
SMARCD3-213ENST00000489503 DCPSQ96C86 337 aaKnown RBP15.13■□□□□ 0.01
SMARCD3-213ENST00000489503 ZBED3Q96IU2 234 aaPredicted RBP15.13■□□□□ 0.01
SMARCD3-213ENST00000489503 IL1RAPL2Q9NP60 686 aa15.13■□□□□ 0.01
SMARCD3-213ENST00000489503 CLRN2A0PK11 232 aa15.12■□□□□ 0.01
SMARCD3-213ENST00000489503 HMMRO75330 724 aa15.12■□□□□ 0.01
SMARCD3-213ENST00000489503 CELF2O95319 508 aaKnown RBP15.12■□□□□ 0.01
SMARCD3-213ENST00000489503 RBM5P52756 815 aaKnown RBP eCLIP15.12■□□□□ 0.01
SMARCD3-213ENST00000489503 DLGAP5Q15398 846 aa15.12■□□□□ 0.01
SMARCD3-213ENST00000489503 GORABQ5T7V8 394 aa15.12■□□□□ 0.01
SMARCD3-213ENST00000489503 CDC37L1Q7L3B6 337 aa15.12■□□□□ 0.01
SMARCD3-213ENST00000489503 CCDC8Q9H0W5 538 aaPredicted RBP15.12■□□□□ 0.01
SMARCD3-213ENST00000489503 CHMP4BQ9H444 224 aaKnown RBP15.12■□□□□ 0.01
SMARCD3-213ENST00000489503 GNL3LQ9NVN8 582 aaKnown RBP15.12■□□□□ 0.01
SMARCD3-213ENST00000489503 CEP350Q5VT06 3117 aa15.11■□□□□ 0.01
SMARCD3-213ENST00000489503 SPDYE2BA6NHP3 402 aa15.11■□□□□ 0.01
SMARCD3-213ENST00000489503 TMEM88BA6NKF7 163 aa15.11■□□□□ 0.01
SMARCD3-213ENST00000489503 SPDYE6P0CI01 402 aa15.11■□□□□ 0.01
SMARCD3-213ENST00000489503 PRDX5P30044 214 aa15.11■□□□□ 0.01
SMARCD3-213ENST00000489503 PRAMEF18Q5VWM3 479 aa15.11■□□□□ 0.01
SMARCD3-213ENST00000489503 CST9Q5W186 159 aa15.11■□□□□ 0.01
SMARCD3-213ENST00000489503 SULF1Q8IWU6 871 aa15.11■□□□□ 0.01
SMARCD3-213ENST00000489503 TBC1D22AQ8WUA7 517 aa15.11■□□□□ 0.01
SMARCD3-213ENST00000489503 EAF2Q96CJ1 260 aaPredicted RBP15.11■□□□□ 0.01
SMARCD3-213ENST00000489503 CREBZFQ9NS37 354 aa15.11■□□□□ 0.01
SMARCD3-213ENST00000489503 MKRN1Q9UHC7 482 aaKnown RBP15.11■□□□□ 0.01
SMARCD3-213ENST00000489503 DBNLQ9UJU6 430 aaKnown RBP15.11■□□□□ 0.01
SMARCD3-213ENST00000489503 CRKP46108 304 aa15.1■□□□□ 0.01
SMARCD3-213ENST00000489503 WDR66Q8TBY9 1149 aa15.1■□□□□ 0.01
SMARCD3-213ENST00000489503 CDCA5Q96FF9 252 aa15.1■□□□□ 0.01
SMARCD3-213ENST00000489503 PRMT6Q96LA8 375 aaPredicted RBP15.1■□□□□ 0.01
SMARCD3-213ENST00000489503 GPR108Q9NPR9 543 aa15.1■□□□□ 0.01
SMARCD3-213ENST00000489503 DENND2AQ9ULE3 1009 aa15.1■□□□□ 0.01
SMARCD3-213ENST00000489503 ABT1Q9ULW3 272 aaKnown RBP15.1■□□□□ 0.01
SMARCD3-213ENST00000489503 PCDHB15Q9Y5E8 787 aa15.1■□□□□ 0.01
SMARCD3-213ENST00000489503 AKAP11Q9UKA4 1901 aa15.09■□□□□ 0.01
SMARCD3-213ENST00000489503 SEMA3EO15041 775 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms