RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 SOS1Q07889 1333 aaPredicted RBP11.71□□□□□ -0.53
TNRC6B-208ENST00000489500 SENP3-EIF4A1A0A087X0R7 540 aa11.71□□□□□ -0.53
TNRC6B-208ENST00000489500 A0A0G2JLW4 131 aa11.71□□□□□ -0.53
TNRC6B-208ENST00000489500 PTK2Q05397 1052 aa11.71□□□□□ -0.53
TNRC6B-208ENST00000489500 USPL1Q5W0Q7 1092 aa11.71□□□□□ -0.53
TNRC6B-208ENST00000489500 ZNF790Q6PG37 636 aa11.71□□□□□ -0.53
TNRC6B-208ENST00000489500 ARHGAP27Q6ZUM4 889 aa11.71□□□□□ -0.53
TNRC6B-208ENST00000489500 TSEN34Q9BSV6 310 aaKnown RBP11.71□□□□□ -0.53
TNRC6B-208ENST00000489500 NARFQ9UHQ1 456 aa11.71□□□□□ -0.53
TNRC6B-208ENST00000489500 DNMT3LQ9UJW3 386 aa11.71□□□□□ -0.53
TNRC6B-208ENST00000489500 WWC3Q9ULE0 1092 aa11.71□□□□□ -0.53
TNRC6B-208ENST00000489500 ARFGEF1Q9Y6D6 1849 aa11.71□□□□□ -0.54
TNRC6B-208ENST00000489500 ATP10DQ9P241 1426 aa11.7□□□□□ -0.54
TNRC6B-208ENST00000489500 COL15A1P39059 1388 aa11.7□□□□□ -0.54
TNRC6B-208ENST00000489500 SIPA1L3O60292 1781 aaPredicted RBP11.7□□□□□ -0.54
TNRC6B-208ENST00000489500 BTBD11A6QL63 1104 aa11.7□□□□□ -0.54
TNRC6B-208ENST00000489500 HTATSF1O43719 755 aaKnown RBP11.7□□□□□ -0.54
TNRC6B-208ENST00000489500 CANXP27824 592 aaKnown RBP11.7□□□□□ -0.54
TNRC6B-208ENST00000489500 PPP2R1AP30153 589 aa11.7□□□□□ -0.54
TNRC6B-208ENST00000489500 NEUROD2Q15784 382 aa11.7□□□□□ -0.54
TNRC6B-208ENST00000489500 DALRD3Q5D0E6 543 aaKnown RBP11.7□□□□□ -0.54
TNRC6B-208ENST00000489500 IL27Q8NEV9 243 aa11.7□□□□□ -0.54
TNRC6B-208ENST00000489500 SRP68Q9UHB9 627 aaKnown RBP11.7□□□□□ -0.54
TNRC6B-208ENST00000489500 KCPQ6ZWJ8 1503 aa11.7□□□□□ -0.54
TNRC6B-208ENST00000489500 PXDNLA1KZ92 1463 aa11.7□□□□□ -0.54
TNRC6B-208ENST00000489500 NPHP1O15259 732 aa11.69□□□□□ -0.54
TNRC6B-208ENST00000489500 DPEP1P16444 411 aa11.69□□□□□ -0.54
TNRC6B-208ENST00000489500 INTS6LQ5JSJ4 861 aaKnown RBP11.69□□□□□ -0.54
TNRC6B-208ENST00000489500 BRCA1P38398 1863 aaKnown RBP11.69□□□□□ -0.54
TNRC6B-208ENST00000489500 HEG1Q9ULI3 1381 aa11.68□□□□□ -0.54
TNRC6B-208ENST00000489500 AFDNP55196 1824 aaKnown RBP11.68□□□□□ -0.54
TNRC6B-208ENST00000489500 LORP23490 312 aaPredicted RBP11.68□□□□□ -0.54
TNRC6B-208ENST00000489500 TM4SF1P30408 202 aa11.68□□□□□ -0.54
TNRC6B-208ENST00000489500 IL17REQ8NFR9 667 aa11.68□□□□□ -0.54
TNRC6B-208ENST00000489500 PCMTD1Q96MG8 357 aaPredicted RBP11.68□□□□□ -0.54
TNRC6B-208ENST00000489500 PGPEP1Q9NXJ5 209 aa11.68□□□□□ -0.54
TNRC6B-208ENST00000489500 CDV3Q9UKY7 258 aaKnown RBP11.68□□□□□ -0.54
TNRC6B-208ENST00000489500 ZBTB1Q9Y2K1 713 aa11.68□□□□□ -0.54
TNRC6B-208ENST00000489500 ZNF330Q9Y3S2 320 aaPredicted RBP11.68□□□□□ -0.54
TNRC6B-208ENST00000489500 GPSM3Q9Y4H4 160 aa11.68□□□□□ -0.54
TNRC6B-208ENST00000489500 UTRNP46939 3433 aa11.68□□□□□ -0.54
TNRC6B-208ENST00000489500 KIAA1551Q9HCM1 1747 aa11.67□□□□□ -0.54
TNRC6B-208ENST00000489500 POLRMTO00411 1230 aaKnown RBP11.67□□□□□ -0.54
TNRC6B-208ENST00000489500 IL6STP40189 918 aaPredicted RBP11.67□□□□□ -0.54
TNRC6B-208ENST00000489500 Q6ZVU0 165 aa11.67□□□□□ -0.54
TNRC6B-208ENST00000489500 PNISRQ8TF01 805 aaKnown RBP11.67□□□□□ -0.54
TNRC6B-208ENST00000489500 ZNF526Q8TF50 670 aaPredicted RBP11.67□□□□□ -0.54
TNRC6B-208ENST00000489500 ZNF496Q96IT1 587 aaPredicted RBP11.67□□□□□ -0.54
TNRC6B-208ENST00000489500 TRIM34Q9BYJ4 488 aa11.67□□□□□ -0.54
TNRC6B-208ENST00000489500 GOPCQ9HD26 462 aa11.67□□□□□ -0.54
TNRC6B-208ENST00000489500 MAPK8IP3Q9UPT6 1336 aa11.66□□□□□ -0.54
TNRC6B-208ENST00000489500 SERPINB2P05120 415 aa11.66□□□□□ -0.54
TNRC6B-208ENST00000489500 PHACTR3Q96KR7 559 aa11.66□□□□□ -0.54
TNRC6B-208ENST00000489500 CEMIPQ8WUJ3 1361 aa11.66□□□□□ -0.54
TNRC6B-208ENST00000489500 H0YIN7 160 aa11.65□□□□□ -0.54
TNRC6B-208ENST00000489500 SNRPA1P09661 255 aaKnown RBP11.65□□□□□ -0.54
TNRC6B-208ENST00000489500 EIF5P55010 431 aaKnown RBP11.65□□□□□ -0.54
TNRC6B-208ENST00000489500 DDR1Q08345 913 aa11.65□□□□□ -0.54
TNRC6B-208ENST00000489500 NFIXQ14938 502 aa11.65□□□□□ -0.54
TNRC6B-208ENST00000489500 ZNF652Q9Y2D9 606 aa11.65□□□□□ -0.54
TNRC6B-208ENST00000489500 ADCY9O60503 1353 aa11.65□□□□□ -0.55
TNRC6B-208ENST00000489500 FIGNL2A6NMB9 653 aa11.64□□□□□ -0.55
TNRC6B-208ENST00000489500 PPFIA3O75145 1194 aa11.64□□□□□ -0.55
TNRC6B-208ENST00000489500 PDE6BP35913 854 aa11.64□□□□□ -0.55
TNRC6B-208ENST00000489500 RALBP1Q15311 655 aa11.64□□□□□ -0.55
TNRC6B-208ENST00000489500 TAF7Q15545 349 aaPredicted RBP11.64□□□□□ -0.55
TNRC6B-208ENST00000489500 BICDL1Q6ZP65 573 aa11.64□□□□□ -0.55
TNRC6B-208ENST00000489500 C16orf71Q8IYS4 520 aaPredicted RBP11.64□□□□□ -0.55
TNRC6B-208ENST00000489500 AGBL1Q96MI9 1066 aa11.64□□□□□ -0.55
TNRC6B-208ENST00000489500 SETDB2Q96T68 719 aa11.64□□□□□ -0.55
TNRC6B-208ENST00000489500 TMPRSS4Q9NRS4 437 aa11.64□□□□□ -0.55
TNRC6B-208ENST00000489500 DLG5Q8TDM6 1919 aa11.64□□□□□ -0.55
TNRC6B-208ENST00000489500 NRXN2Q9P2S2 1712 aa11.63□□□□□ -0.55
TNRC6B-208ENST00000489500 KDM2BQ8NHM5 1336 aa11.63□□□□□ -0.55
TNRC6B-208ENST00000489500 TTLL8A6PVC2 850 aa11.63□□□□□ -0.55
TNRC6B-208ENST00000489500 VSIG8P0DPA2 414 aa11.63□□□□□ -0.55
TNRC6B-208ENST00000489500 RAB15P59190 212 aa11.63□□□□□ -0.55
TNRC6B-208ENST00000489500 ST5P78524 1137 aa11.63□□□□□ -0.55
TNRC6B-208ENST00000489500 DHX9Q08211 1270 aaKnown RBP11.63□□□□□ -0.55
TNRC6B-208ENST00000489500 TTLL6Q8N841 843 aa11.63□□□□□ -0.55
TNRC6B-208ENST00000489500 PNMA1Q8ND90 353 aa11.63□□□□□ -0.55
TNRC6B-208ENST00000489500 DLEC1Q9Y238 1755 aa11.63□□□□□ -0.55
TNRC6B-208ENST00000489500 CARMIL3Q8ND23 1372 aa11.63□□□□□ -0.55
TNRC6B-208ENST00000489500 SPINT1O43278 529 aa11.62□□□□□ -0.55
TNRC6B-208ENST00000489500 KCNA3P22001 575 aa11.62□□□□□ -0.55
TNRC6B-208ENST00000489500 CHRNA5P30532 468 aa11.62□□□□□ -0.55
TNRC6B-208ENST00000489500 BRPF1P55201 1214 aaPredicted RBP11.62□□□□□ -0.55
TNRC6B-208ENST00000489500 MCM10Q7L590 875 aa11.62□□□□□ -0.55
TNRC6B-208ENST00000489500 DZIP3Q86Y13 1208 aaKnown RBP11.62□□□□□ -0.55
TNRC6B-208ENST00000489500 C2CD5Q86YS7 1000 aa11.62□□□□□ -0.55
TNRC6B-208ENST00000489500 TBC1D2BQ9UPU7 963 aa11.62□□□□□ -0.55
TNRC6B-208ENST00000489500 SCN7AQ01118 1682 aa11.62□□□□□ -0.55
TNRC6B-208ENST00000489500 SBF1O95248 1867 aa11.61□□□□□ -0.55
TNRC6B-208ENST00000489500 CCDC88AQ3V6T2 1871 aa11.61□□□□□ -0.55
TNRC6B-208ENST00000489500 A1BGP04217 495 aa11.61□□□□□ -0.55
TNRC6B-208ENST00000489500 TMEM259Q4ZIN3 620 aa11.61□□□□□ -0.55
TNRC6B-208ENST00000489500 C9orf131Q5VYM1 1079 aa11.61□□□□□ -0.55
TNRC6B-208ENST00000489500 CLEC4GQ6UXB4 293 aa11.61□□□□□ -0.55
TNRC6B-208ENST00000489500 ZSCAN1Q8NBB4 408 aa11.61□□□□□ -0.55
TNRC6B-208ENST00000489500 BRIP1Q9BX63 1249 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 265.5 ms