RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 TTC12Q9H892 705 aaPredicted RBP10.69□□□□□ -0.7
EXOSC1-211ENST00000489158 PARP3Q9Y6F1 533 aa10.69□□□□□ -0.7
EXOSC1-211ENST00000489158 ANKRD31Q8N7Z5 1873 aa10.69□□□□□ -0.7
EXOSC1-211ENST00000489158 RFX7Q2KHR2 1363 aa10.69□□□□□ -0.7
EXOSC1-211ENST00000489158 KLRG2A4D1S0 409 aaPredicted RBP10.69□□□□□ -0.7
EXOSC1-211ENST00000489158 ADCY5O95622 1261 aa10.69□□□□□ -0.7
EXOSC1-211ENST00000489158 CHMLP26374 656 aa10.69□□□□□ -0.7
EXOSC1-211ENST00000489158 ANAPC15P60006 121 aa10.69□□□□□ -0.7
EXOSC1-211ENST00000489158 CRY2Q49AN0 593 aa10.69□□□□□ -0.7
EXOSC1-211ENST00000489158 ZNF710Q8N1W2 664 aa10.69□□□□□ -0.7
EXOSC1-211ENST00000489158 FAM184AQ8NB25 1140 aa10.69□□□□□ -0.7
EXOSC1-211ENST00000489158 HELBQ8NG08 1087 aaPredicted RBP10.69□□□□□ -0.7
EXOSC1-211ENST00000489158 SLC16A10Q8TF71 515 aa10.69□□□□□ -0.7
EXOSC1-211ENST00000489158 EVI5LQ96CN4 794 aa10.69□□□□□ -0.7
EXOSC1-211ENST00000489158 PRIMPOLQ96LW4 560 aa10.69□□□□□ -0.7
EXOSC1-211ENST00000489158 UPF3BQ9BZI7 483 aaKnown RBP10.69□□□□□ -0.7
EXOSC1-211ENST00000489158 WDR33Q9C0J8 1336 aaKnown RBP10.68□□□□□ -0.7
EXOSC1-211ENST00000489158 RPS8P62241 208 aaKnown RBP10.68□□□□□ -0.7
EXOSC1-211ENST00000489158 CCDC158Q5M9N0 1113 aa10.68□□□□□ -0.7
EXOSC1-211ENST00000489158 LPIN2Q92539 896 aa10.68□□□□□ -0.7
EXOSC1-211ENST00000489158 HIP1O00291 1037 aa10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 GRAPQ13588 217 aa10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 CCDC183Q5T5S1 534 aa10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 GRAPLQ8TC17 118 aaPredicted RBP10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 RPGRQ92834 1020 aaKnown RBP10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 XAGE2Q96GT9 111 aa10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 ZNF512BQ96KM6 892 aaPredicted RBP10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 DNAJC2Q99543 621 aaKnown RBP10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 BRIP1Q9BX63 1249 aa10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 TAF5LO75529 589 aa10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 MMP10P09238 476 aa10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 SLC5A1P13866 664 aa10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 FGFR2P21802 821 aa10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 HOXA10P31260 410 aaPredicted RBP10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 HMGN5P82970 282 aaKnown RBP10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 TTC39AQ5SRH9 613 aa10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 MSL1Q68DK7 614 aa10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 TMC4Q7Z404 712 aa10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 CELF1Q92879 486 aaKnown RBP10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 RBM17Q96I25 401 aaKnown RBP10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 ANKRD2Q9GZV1 360 aa10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 CNPY2Q9Y2B0 182 aa10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 TCHHQ07283 1943 aa10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 LRRC37AA6NMS7 1700 aa10.67□□□□□ -0.7
EXOSC1-211ENST00000489158 COL4A1P02462 1669 aa10.66□□□□□ -0.7
EXOSC1-211ENST00000489158 IFIT1P09914 478 aaKnown RBP10.66□□□□□ -0.7
EXOSC1-211ENST00000489158 ADORA1P30542 326 aa10.66□□□□□ -0.7
EXOSC1-211ENST00000489158 PDE6BP35913 854 aa10.66□□□□□ -0.7
EXOSC1-211ENST00000489158 CHRNDQ07001 517 aa10.66□□□□□ -0.7
EXOSC1-211ENST00000489158 UBE4AQ14139 1066 aa10.66□□□□□ -0.7
EXOSC1-211ENST00000489158 HAUS7Q99871 368 aa10.66□□□□□ -0.7
EXOSC1-211ENST00000489158 FSD1Q9BTV5 496 aa10.66□□□□□ -0.7
EXOSC1-211ENST00000489158 ZHX1Q9UKY1 873 aaPredicted RBP10.66□□□□□ -0.7
EXOSC1-211ENST00000489158 EPB41L2O43491 1005 aaKnown RBP10.66□□□□□ -0.7
EXOSC1-211ENST00000489158 GTF2F1P35269 517 aaKnown RBP eCLIP10.66□□□□□ -0.7
EXOSC1-211ENST00000489158 CRAMP1Q96RY5 1269 aa10.66□□□□□ -0.7
EXOSC1-211ENST00000489158 DIAPH3Q9NSV4 1193 aa10.66□□□□□ -0.7
EXOSC1-211ENST00000489158 NDUFB9Q9Y6M9 179 aa10.66□□□□□ -0.7
EXOSC1-211ENST00000489158 RPAP1Q9BWH6 1393 aaPredicted RBP10.65□□□□□ -0.7
EXOSC1-211ENST00000489158 UQCRFS1P1P0C7P4 283 aa10.65□□□□□ -0.7
EXOSC1-211ENST00000489158 DMTNQ08495 405 aa10.65□□□□□ -0.7
EXOSC1-211ENST00000489158 TMEM87AQ8NBN3 555 aa10.65□□□□□ -0.7
EXOSC1-211ENST00000489158 EDC3Q96F86 508 aaKnown RBP10.65□□□□□ -0.7
EXOSC1-211ENST00000489158 ZBTB22O15209 634 aa10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 KDM4AO75164 1064 aa10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 BBOX1O75936 387 aa10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 LETM1O95202 739 aaPredicted RBP10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 CBX1P83916 185 aa10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 CWC27Q6UX04 472 aaKnown RBP10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 RUFY2Q8WXA3 655 aa10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 IL17RAQ96F46 866 aa10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 IL25Q9H293 177 aa10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 SPTLC3Q9NUV7 552 aa10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 MINPP1Q9UNW1 487 aa10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 COL11A2P13942 1736 aaPredicted RBP10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 RAD50Q92878 1312 aa10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 SNAP23O00161 211 aa10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 ZSCAN22P10073 491 aaPredicted RBP10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 ZSCAN20P17040 1043 aaPredicted RBP10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 ARID4AP29374 1257 aaPredicted RBP10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 PLCB2Q00722 1185 aa10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 FKBP4Q02790 459 aaKnown RBP eCLIP10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 LRRFIP1Q32MZ4 808 aaKnown RBP10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 PPP4R3BQ5MIZ7 849 aa10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 UTP14CQ5TAP6 766 aaKnown RBP10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 KIF3AQ9Y496 699 aa10.64□□□□□ -0.71
EXOSC1-211ENST00000489158 AKAP11Q9UKA4 1901 aa10.63□□□□□ -0.71
EXOSC1-211ENST00000489158 GOLIM4O00461 696 aa10.63□□□□□ -0.71
EXOSC1-211ENST00000489158 NPR1P16066 1061 aa10.63□□□□□ -0.71
EXOSC1-211ENST00000489158 HSPA4P34932 840 aa10.63□□□□□ -0.71
EXOSC1-211ENST00000489158 LARP6Q9BRS8 491 aaKnown RBP10.63□□□□□ -0.71
EXOSC1-211ENST00000489158 PAG1Q9NWQ8 432 aa10.63□□□□□ -0.71
EXOSC1-211ENST00000489158 DLEC1Q9Y238 1755 aa10.63□□□□□ -0.71
EXOSC1-211ENST00000489158 MYH7P12883 1935 aa10.63□□□□□ -0.71
EXOSC1-211ENST00000489158 ALDH1B1P30837 517 aa10.63□□□□□ -0.71
EXOSC1-211ENST00000489158 KCNJ4P48050 445 aa10.63□□□□□ -0.71
EXOSC1-211ENST00000489158 UBE2HP62256 183 aa10.63□□□□□ -0.71
EXOSC1-211ENST00000489158 SNRKQ9NRH2 765 aa10.63□□□□□ -0.71
EXOSC1-211ENST00000489158 LEMD3Q9Y2U8 911 aa10.63□□□□□ -0.71
EXOSC1-211ENST00000489158 KIF13BQ9NQT8 1826 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms