RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 COL16A1Q07092 1604 aaPredicted RBP7.93□□□□□ -1.14
HDLBP-243ENST00000488923 NUP188Q5SRE5 1749 aa7.93□□□□□ -1.14
HDLBP-243ENST00000488923 MAP4K4O95819 1239 aaPredicted RBP7.93□□□□□ -1.14
HDLBP-243ENST00000488923 CSF1RP07333 972 aa7.93□□□□□ -1.14
HDLBP-243ENST00000488923 ZFYP08048 801 aaPredicted RBP7.93□□□□□ -1.14
HDLBP-243ENST00000488923 PIP4K2AP48426 406 aaPredicted RBP7.93□□□□□ -1.14
HDLBP-243ENST00000488923 IFIT5Q13325 482 aaKnown RBP7.93□□□□□ -1.14
HDLBP-243ENST00000488923 NECTIN1Q15223 517 aa7.93□□□□□ -1.14
HDLBP-243ENST00000488923 TSGA10IPQ3SY00 556 aa7.93□□□□□ -1.14
HDLBP-243ENST00000488923 TAF7LQ5H9L4 462 aa7.93□□□□□ -1.14
HDLBP-243ENST00000488923 CCDC158Q5M9N0 1113 aa7.93□□□□□ -1.14
HDLBP-243ENST00000488923 SWT1Q5T5J6 900 aaKnown RBP7.93□□□□□ -1.14
HDLBP-243ENST00000488923 KBTBD3Q8NAB2 608 aa7.93□□□□□ -1.14
HDLBP-243ENST00000488923 ALDH8A1Q9H2A2 487 aaPredicted RBP7.93□□□□□ -1.14
HDLBP-243ENST00000488923 BOLA2Q9H3K6 86 aa7.93□□□□□ -1.14
HDLBP-243ENST00000488923 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.93□□□□□ -1.14
HDLBP-243ENST00000488923 DBNLQ9UJU6 430 aaKnown RBP7.93□□□□□ -1.14
HDLBP-243ENST00000488923 PALD1Q9ULE6 856 aa7.93□□□□□ -1.14
HDLBP-243ENST00000488923 ATP6V1DQ9Y5K8 247 aa7.93□□□□□ -1.14
HDLBP-243ENST00000488923 CYP46A1Q9Y6A2 500 aa7.93□□□□□ -1.14
HDLBP-243ENST00000488923 WDR33Q9C0J8 1336 aaKnown RBP7.93□□□□□ -1.14
HDLBP-243ENST00000488923 PALLDQ8WX93 1383 aa7.93□□□□□ -1.14
HDLBP-243ENST00000488923 MED23Q9ULK4 1368 aa7.93□□□□□ -1.14
HDLBP-243ENST00000488923 TOGARAM1Q9Y4F4 1720 aa7.92□□□□□ -1.14
HDLBP-243ENST00000488923 AFDNP55196 1824 aaKnown RBP7.92□□□□□ -1.14
HDLBP-243ENST00000488923 FAM187AA6NFU0 413 aa7.92□□□□□ -1.14
HDLBP-243ENST00000488923 RNF223E7ERA6 249 aa7.92□□□□□ -1.14
HDLBP-243ENST00000488923 BAG4O95429 457 aaKnown RBP7.92□□□□□ -1.14
HDLBP-243ENST00000488923 HMGB1P09429 215 aaKnown RBP7.92□□□□□ -1.14
HDLBP-243ENST00000488923 NMIQ13287 307 aaPredicted RBP7.92□□□□□ -1.14
HDLBP-243ENST00000488923 PARP10Q53GL7 1025 aa7.92□□□□□ -1.14
HDLBP-243ENST00000488923 HELLSQ9NRZ9 838 aa7.92□□□□□ -1.14
HDLBP-243ENST00000488923 RBM8AQ9Y5S9 174 aaKnown RBP7.92□□□□□ -1.14
HDLBP-243ENST00000488923 SPATA31A5Q5VU36 1347 aa7.92□□□□□ -1.14
HDLBP-243ENST00000488923 SPATA31A7Q8IWB4 1347 aa7.92□□□□□ -1.14
HDLBP-243ENST00000488923 JCADQ9P266 1359 aa7.92□□□□□ -1.14
HDLBP-243ENST00000488923 ANKRD18BA2A2Z9 1011 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 GOLGA6L3A6NEY3 463 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 PDE8AO60658 829 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 SSFA2P28290 1259 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 CSPP1Q1MSJ5 1256 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 KLHL40Q2TBA0 621 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 MCMDC2Q4G0Z9 681 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 GORABQ5T7V8 394 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 USPL1Q5W0Q7 1092 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 CREB3L3Q68CJ9 461 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 RUFY3Q7L099 469 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 ATG9AQ7Z3C6 839 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 NLRP10Q86W26 655 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 DZIP3Q86Y13 1208 aaKnown RBP7.91□□□□□ -1.14
HDLBP-243ENST00000488923 ANKLE1Q8NAG6 615 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 TTC13Q8NBP0 860 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 KLHDC4Q8TBB5 520 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 SYTL4Q96C24 671 aaPredicted RBP7.91□□□□□ -1.14
HDLBP-243ENST00000488923 ZNF512BQ96KM6 892 aaPredicted RBP7.91□□□□□ -1.14
HDLBP-243ENST00000488923 TTC14Q96N46 770 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 PDRG1Q9NUG6 133 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 CCDC87Q9NVE4 849 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 TLR7Q9NYK1 1049 aaKnown RBP7.91□□□□□ -1.14
HDLBP-243ENST00000488923 ZNF652Q9Y2D9 606 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 SH3TC1Q8TE82 1336 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 SLIT2O94813 1529 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 PHLPP1O60346 1717 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 NWD2Q9ULI1 1742 aa7.91□□□□□ -1.14
HDLBP-243ENST00000488923 AK9Q5TCS8 1911 aa7.9□□□□□ -1.14
HDLBP-243ENST00000488923 SPEF2Q9C093 1822 aa7.9□□□□□ -1.14
HDLBP-243ENST00000488923 CICQ96RK0 1608 aaPredicted RBP7.9□□□□□ -1.14
HDLBP-243ENST00000488923 ZNF609O15014 1411 aa7.9□□□□□ -1.14
HDLBP-243ENST00000488923 A0A1B0GUL7 405 aa7.9□□□□□ -1.14
HDLBP-243ENST00000488923 GRXCR2A6NFK2 248 aa7.9□□□□□ -1.14
HDLBP-243ENST00000488923 TLL1O43897 1013 aa7.9□□□□□ -1.14
HDLBP-243ENST00000488923 ADAMTS2O95450 1211 aa7.9□□□□□ -1.14
HDLBP-243ENST00000488923 MBD3O95983 291 aa7.9□□□□□ -1.14
HDLBP-243ENST00000488923 IFIT1P09914 478 aaKnown RBP7.9□□□□□ -1.14
HDLBP-243ENST00000488923 CASTP20810 708 aaKnown RBP7.9□□□□□ -1.14
HDLBP-243ENST00000488923 PDCP20941 246 aa7.9□□□□□ -1.14
HDLBP-243ENST00000488923 MRE11P49959 708 aa7.9□□□□□ -1.14
HDLBP-243ENST00000488923 AK2P54819 239 aa7.9□□□□□ -1.14
HDLBP-243ENST00000488923 CTSWP56202 376 aa7.9□□□□□ -1.14
HDLBP-243ENST00000488923 INSM1Q01101 510 aaPredicted RBP7.9□□□□□ -1.14
HDLBP-243ENST00000488923 ZSCAN25Q6NSZ9 544 aa7.9□□□□□ -1.14
HDLBP-243ENST00000488923 PRPF40BQ6NWY9 871 aaKnown RBP7.9□□□□□ -1.14
HDLBP-243ENST00000488923 BLOC1S2Q6QNY1 142 aa7.9□□□□□ -1.14
HDLBP-243ENST00000488923 PAXIP1Q6ZW49 1069 aaPredicted RBP7.9□□□□□ -1.14
HDLBP-243ENST00000488923 JAKMIP1Q96N16 626 aaKnown RBP7.9□□□□□ -1.14
HDLBP-243ENST00000488923 NEUROD6Q96NK8 337 aa7.9□□□□□ -1.14
HDLBP-243ENST00000488923 DBNDD2Q9BQY9 259 aa7.9□□□□□ -1.14
HDLBP-243ENST00000488923 DSCC1Q9BVC3 393 aa7.9□□□□□ -1.14
HDLBP-243ENST00000488923 UPF3BQ9BZI7 483 aaKnown RBP7.9□□□□□ -1.14
HDLBP-243ENST00000488923 PAG1Q9NWQ8 432 aa7.9□□□□□ -1.14
HDLBP-243ENST00000488923 SMC3Q9UQE7 1217 aa7.9□□□□□ -1.14
HDLBP-243ENST00000488923 ZNF330Q9Y3S2 320 aaPredicted RBP7.9□□□□□ -1.14
HDLBP-243ENST00000488923 WNK3Q9BYP7 1800 aa7.89□□□□□ -1.15
HDLBP-243ENST00000488923 NRAPQ86VF7 1730 aa7.89□□□□□ -1.15
HDLBP-243ENST00000488923 RPAP1Q9BWH6 1393 aaPredicted RBP7.89□□□□□ -1.15
HDLBP-243ENST00000488923 IRS4O14654 1257 aaPredicted RBP7.89□□□□□ -1.15
HDLBP-243ENST00000488923 SLC27A2O14975 620 aa7.89□□□□□ -1.15
HDLBP-243ENST00000488923 TAF5LO75529 589 aa7.89□□□□□ -1.15
HDLBP-243ENST00000488923 BRD1O95696 1058 aa7.89□□□□□ -1.15
HDLBP-243ENST00000488923 NCLP19338 710 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms