RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 PBXIP1Q96AQ6 731 aa6.2□□□□□ -1.42
CD46-215ENST00000488596 KCNF1Q9H3M0 494 aa6.2□□□□□ -1.42
CD46-215ENST00000488596 OSGEPQ9NPF4 335 aa6.2□□□□□ -1.42
CD46-215ENST00000488596 PDE2AO00408 941 aaPredicted RBP6.19□□□□□ -1.42
CD46-215ENST00000488596 PDGFAP04085 211 aa6.19□□□□□ -1.42
CD46-215ENST00000488596 CABP4P57796 275 aa6.19□□□□□ -1.42
CD46-215ENST00000488596 C8orf34Q49A92 452 aa6.19□□□□□ -1.42
CD46-215ENST00000488596 ANKRD34AQ69YU3 496 aa6.19□□□□□ -1.42
CD46-215ENST00000488596 INTS5Q6P9B9 1019 aaKnown RBP6.19□□□□□ -1.42
CD46-215ENST00000488596 DTX1Q86Y01 620 aa6.19□□□□□ -1.42
CD46-215ENST00000488596 HOMEZQ8IX15 550 aa6.19□□□□□ -1.42
CD46-215ENST00000488596 HELQQ8TDG4 1101 aa6.19□□□□□ -1.42
CD46-215ENST00000488596 RUSC1Q9BVN2 902 aa6.19□□□□□ -1.42
CD46-215ENST00000488596 RNF208Q9H0X6 261 aa6.19□□□□□ -1.42
CD46-215ENST00000488596 SOX13Q9UN79 622 aa6.19□□□□□ -1.42
CD46-215ENST00000488596 SOX1O00570 391 aaPredicted RBP6.18□□□□□ -1.42
CD46-215ENST00000488596 RPLP1P05386 114 aaKnown RBP6.18□□□□□ -1.42
CD46-215ENST00000488596 GRIK1P39086 918 aa6.18□□□□□ -1.42
CD46-215ENST00000488596 NOM1Q5C9Z4 860 aaKnown RBP6.18□□□□□ -1.42
CD46-215ENST00000488596 EIF1AXP47813 144 aaKnown RBP6.17□□□□□ -1.42
CD46-215ENST00000488596 VN1R5Q7Z5H4 357 aa6.17□□□□□ -1.42
CD46-215ENST00000488596 TMEM102Q8N9M5 508 aaPredicted RBP6.17□□□□□ -1.42
CD46-215ENST00000488596 NXPE3Q969Y0 559 aa6.17□□□□□ -1.42
CD46-215ENST00000488596 OSMRQ99650 979 aa6.17□□□□□ -1.42
CD46-215ENST00000488596 MEGF11A6BM72 1044 aa6.16□□□□□ -1.42
CD46-215ENST00000488596 WDR64B1ANS9 1081 aa6.16□□□□□ -1.42
CD46-215ENST00000488596 EREGO14944 169 aa6.16□□□□□ -1.42
CD46-215ENST00000488596 MPSTP25325 297 aa6.16□□□□□ -1.42
CD46-215ENST00000488596 MZF1P28698 734 aaPredicted RBP6.16□□□□□ -1.42
CD46-215ENST00000488596 HOXA10P31260 410 aaPredicted RBP6.16□□□□□ -1.42
CD46-215ENST00000488596 C19orf57Q0VDD7 668 aa6.16□□□□□ -1.42
CD46-215ENST00000488596 SGO2Q562F6 1265 aa6.16□□□□□ -1.42
CD46-215ENST00000488596 FDX2Q6P4F2 183 aa6.16□□□□□ -1.42
CD46-215ENST00000488596 PMEPA1Q969W9 287 aa6.16□□□□□ -1.42
CD46-215ENST00000488596 MFSD14AQ96MC6 490 aa6.16□□□□□ -1.42
CD46-215ENST00000488596 ZKSCAN3Q9BRR0 538 aa6.16□□□□□ -1.42
CD46-215ENST00000488596 POLIQ9UNA4 740 aa6.16□□□□□ -1.42
CD46-215ENST00000488596 DLGAP3O95886 979 aa6.15□□□□□ -1.42
CD46-215ENST00000488596 WNT11O96014 354 aa6.15□□□□□ -1.42
CD46-215ENST00000488596 PCSK2P16519 638 aa6.15□□□□□ -1.42
CD46-215ENST00000488596 MAP4P27816 1152 aaKnown RBP6.15□□□□□ -1.42
CD46-215ENST00000488596 ARL4DP49703 201 aa6.15□□□□□ -1.42
CD46-215ENST00000488596 MTMR3Q13615 1198 aa6.15□□□□□ -1.42
CD46-215ENST00000488596 GTF3C2Q8WUA4 911 aaPredicted RBP6.15□□□□□ -1.42
CD46-215ENST00000488596 BSNDQ8WZ55 320 aa6.15□□□□□ -1.42
CD46-215ENST00000488596 TMPRSS13Q9BYE2 586 aa6.15□□□□□ -1.42
CD46-215ENST00000488596 HIF3AQ9Y2N7 669 aa6.15□□□□□ -1.42
CD46-215ENST00000488596 TNFRSF21O75509 655 aa6.14□□□□□ -1.43
CD46-215ENST00000488596 IKBKEQ14164 716 aa6.14□□□□□ -1.43
CD46-215ENST00000488596 SHISA5Q8N114 240 aa6.14□□□□□ -1.43
CD46-215ENST00000488596 C12orf50Q8NA57 414 aaPredicted RBP6.14□□□□□ -1.43
CD46-215ENST00000488596 TTC16Q8NEE8 873 aa6.14□□□□□ -1.43
CD46-215ENST00000488596 GAS2O43903 313 aaKnown RBP6.13□□□□□ -1.43
CD46-215ENST00000488596 TIAF1O95411 115 aa6.13□□□□□ -1.43
CD46-215ENST00000488596 NUTM2GQ5VZR2 741 aa6.13□□□□□ -1.43
CD46-215ENST00000488596 FBXL6Q8N531 539 aa6.13□□□□□ -1.43
CD46-215ENST00000488596 ADGRE2Q9UHX3 823 aa6.13□□□□□ -1.43
CD46-215ENST00000488596 FOXD3Q9UJU5 478 aaPredicted RBP6.13□□□□□ -1.43
CD46-215ENST00000488596 LOC100289279A0A1B0GTE1 492 aa6.12□□□□□ -1.43
CD46-215ENST00000488596 PHACTR2O75167 634 aa6.12□□□□□ -1.43
CD46-215ENST00000488596 F13BP05160 661 aa6.12□□□□□ -1.43
CD46-215ENST00000488596 DRD2P14416 443 aa6.12□□□□□ -1.43
CD46-215ENST00000488596 SSFA2P28290 1259 aa6.12□□□□□ -1.43
CD46-215ENST00000488596 PEAR1Q5VY43 1037 aaPredicted RBP6.12□□□□□ -1.43
CD46-215ENST00000488596 SMG8Q8ND04 991 aaKnown RBP6.12□□□□□ -1.43
CD46-215ENST00000488596 ASAP3Q8TDY4 903 aa6.12□□□□□ -1.43
CD46-215ENST00000488596 USP26Q9BXU7 913 aa6.12□□□□□ -1.43
CD46-215ENST00000488596 SUGCTQ9HAC7 445 aa6.12□□□□□ -1.43
CD46-215ENST00000488596 LATS2Q9NRM7 1088 aa6.12□□□□□ -1.43
CD46-215ENST00000488596 PIM2Q9P1W9 311 aa6.12□□□□□ -1.43
CD46-215ENST00000488596 METTL12A8MUP2 240 aa6.11□□□□□ -1.43
CD46-215ENST00000488596 PPP1R15AO75807 674 aaPredicted RBP6.11□□□□□ -1.43
CD46-215ENST00000488596 ESRRAP11474 423 aaPredicted RBP6.11□□□□□ -1.43
CD46-215ENST00000488596 NPR3P17342 541 aa6.11□□□□□ -1.43
CD46-215ENST00000488596 RXRBP28702 533 aa6.11□□□□□ -1.43
CD46-215ENST00000488596 CDPF1Q6NVV7 123 aa6.11□□□□□ -1.43
CD46-215ENST00000488596 SOX17Q9H6I2 414 aaPredicted RBP6.11□□□□□ -1.43
CD46-215ENST00000488596 CYP4F12Q9HCS2 524 aa6.11□□□□□ -1.43
CD46-215ENST00000488596 CARNS1A5YM72 827 aa6.1□□□□□ -1.43
CD46-215ENST00000488596 TMEM88BA6NKF7 163 aa6.1□□□□□ -1.43
CD46-215ENST00000488596 EDN3P14138 238 aa6.1□□□□□ -1.43
CD46-215ENST00000488596 EXOSC6Q5RKV6 272 aaKnown RBP6.1□□□□□ -1.43
CD46-215ENST00000488596 ALKBH2Q6NS38 261 aa6.1□□□□□ -1.43
CD46-215ENST00000488596 BHLHE41Q9C0J9 482 aaPredicted RBP6.1□□□□□ -1.43
CD46-215ENST00000488596 FAM95CA0A1B0GW59 222 aa6.09□□□□□ -1.43
CD46-215ENST00000488596 FZD6O60353 706 aa6.09□□□□□ -1.43
CD46-215ENST00000488596 ADMP35318 185 aa6.09□□□□□ -1.43
CD46-215ENST00000488596 AAMPQ13685 434 aa6.09□□□□□ -1.43
CD46-215ENST00000488596 NFKBIBQ15653 356 aa6.09□□□□□ -1.43
CD46-215ENST00000488596 MSMPQ1L6U9 139 aa6.09□□□□□ -1.43
CD46-215ENST00000488596 OGFOD2Q6N063 350 aa6.09□□□□□ -1.43
CD46-215ENST00000488596 ABI1Q8IZP0 508 aa6.09□□□□□ -1.43
CD46-215ENST00000488596 POU5F2Q8N7G0 328 aa6.09□□□□□ -1.43
CD46-215ENST00000488596 RETREG2Q8NC44 543 aa6.09□□□□□ -1.43
CD46-215ENST00000488596 SNX29Q8TEQ0 813 aa6.09□□□□□ -1.43
CD46-215ENST00000488596 FBLIM1Q8WUP2 373 aa6.09□□□□□ -1.43
CD46-215ENST00000488596 ATG3Q9NT62 314 aa6.09□□□□□ -1.43
CD46-215ENST00000488596 LEMD3Q9Y2U8 911 aa6.09□□□□□ -1.43
CD46-215ENST00000488596 POLR3DP05423 398 aaPredicted RBP6.08□□□□□ -1.44
CD46-215ENST00000488596 FOSL1P15407 271 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms