RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 FAM117BQ6P1L5 589 aa7.59□□□□□ -1.19
LINC00888-204ENST00000487386 PI16Q6UXB8 463 aa7.59□□□□□ -1.19
LINC00888-204ENST00000487386 KLHL23Q8NBE8 558 aa7.59□□□□□ -1.19
LINC00888-204ENST00000487386 OSGEPQ9NPF4 335 aa7.59□□□□□ -1.19
LINC00888-204ENST00000487386 ANKRD33BA6NCL7 494 aa7.58□□□□□ -1.2
LINC00888-204ENST00000487386 SOX1O00570 391 aaPredicted RBP7.58□□□□□ -1.2
LINC00888-204ENST00000487386 ITPKAP23677 461 aa7.58□□□□□ -1.2
LINC00888-204ENST00000487386 HGSNATQ68CP4 663 aa7.58□□□□□ -1.2
LINC00888-204ENST00000487386 TMEM130Q8N3G9 435 aa7.58□□□□□ -1.2
LINC00888-204ENST00000487386 KLHDC7BQ96G42 594 aa7.58□□□□□ -1.2
LINC00888-204ENST00000487386 SETDB2Q96T68 719 aa7.58□□□□□ -1.2
LINC00888-204ENST00000487386 CARD10Q9BWT7 1032 aa7.58□□□□□ -1.2
LINC00888-204ENST00000487386 ABCB6Q9NP58 842 aa7.58□□□□□ -1.2
LINC00888-204ENST00000487386 SEC31BQ9NQW1 1179 aa7.58□□□□□ -1.2
LINC00888-204ENST00000487386 KCNK4Q9NYG8 393 aa7.58□□□□□ -1.2
LINC00888-204ENST00000487386 WWC3Q9ULE0 1092 aa7.58□□□□□ -1.2
LINC00888-204ENST00000487386 GADD45BO75293 160 aaPredicted RBP7.57□□□□□ -1.2
LINC00888-204ENST00000487386 ESRRAP11474 423 aaPredicted RBP7.57□□□□□ -1.2
LINC00888-204ENST00000487386 CD68P34810 354 aaPredicted RBP7.57□□□□□ -1.2
LINC00888-204ENST00000487386 MAPK8P45983 427 aa7.57□□□□□ -1.2
LINC00888-204ENST00000487386 PTPN12Q05209 780 aaKnown RBP7.57□□□□□ -1.2
LINC00888-204ENST00000487386 IKBKEQ14164 716 aa7.57□□□□□ -1.2
LINC00888-204ENST00000487386 FOXD4L6Q3SYB3 417 aaPredicted RBP7.57□□□□□ -1.2
LINC00888-204ENST00000487386 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.57□□□□□ -1.2
LINC00888-204ENST00000487386 FOXD4L3Q6VB84 417 aaPredicted RBP7.57□□□□□ -1.2
LINC00888-204ENST00000487386 FBF1Q8TES7 1133 aa7.57□□□□□ -1.2
LINC00888-204ENST00000487386 SOX17Q9H6I2 414 aaPredicted RBP7.57□□□□□ -1.2
LINC00888-204ENST00000487386 TMEM238LA0A1B0GVL6 79 aa7.56□□□□□ -1.2
LINC00888-204ENST00000487386 ADAM11O75078 769 aa7.56□□□□□ -1.2
LINC00888-204ENST00000487386 GATA4P43694 442 aa7.56□□□□□ -1.2
LINC00888-204ENST00000487386 ZNF423Q2M1K9 1284 aa7.56□□□□□ -1.2
LINC00888-204ENST00000487386 ALG1LQ6GMV1 187 aa7.56□□□□□ -1.2
LINC00888-204ENST00000487386 NPAS4Q8IUM7 802 aa7.56□□□□□ -1.2
LINC00888-204ENST00000487386 MRPL18Q9H0U6 180 aaKnown RBP7.56□□□□□ -1.2
LINC00888-204ENST00000487386 NLRP2Q9NX02 1062 aa7.56□□□□□ -1.2
LINC00888-204ENST00000487386 TRAK1Q9UPV9 953 aa7.56□□□□□ -1.2
LINC00888-204ENST00000487386 F8W735 103 aaPredicted RBP7.55□□□□□ -1.2
LINC00888-204ENST00000487386 C19orf57Q0VDD7 668 aa7.55□□□□□ -1.2
LINC00888-204ENST00000487386 CCDC27Q2M243 656 aa7.55□□□□□ -1.2
LINC00888-204ENST00000487386 TXNRD3Q86VQ6 643 aa7.55□□□□□ -1.2
LINC00888-204ENST00000487386 WFDC12Q8WWY7 111 aa7.55□□□□□ -1.2
LINC00888-204ENST00000487386 FOXD4L4Q8WXT5 416 aaPredicted RBP7.55□□□□□ -1.2
LINC00888-204ENST00000487386 BCO2Q9BYV7 579 aa7.55□□□□□ -1.2
LINC00888-204ENST00000487386 CLEC4MQ9H2X3 399 aaPredicted RBP7.55□□□□□ -1.2
LINC00888-204ENST00000487386 ZNF576Q9H609 170 aa7.55□□□□□ -1.2
LINC00888-204ENST00000487386 USP21Q9UK80 565 aa7.55□□□□□ -1.2
LINC00888-204ENST00000487386 ZBTB7CA1YPR0 619 aa7.54□□□□□ -1.2
LINC00888-204ENST00000487386 DDX3YO15523 660 aaKnown RBP7.54□□□□□ -1.2
LINC00888-204ENST00000487386 WISP1O95388 367 aa7.54□□□□□ -1.2
LINC00888-204ENST00000487386 NOS3P29474 1203 aa7.54□□□□□ -1.2
LINC00888-204ENST00000487386 PCDH1Q08174 1060 aa7.54□□□□□ -1.2
LINC00888-204ENST00000487386 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.54□□□□□ -1.2
LINC00888-204ENST00000487386 SSBP4Q9BWG4 385 aaPredicted RBP7.54□□□□□ -1.2
LINC00888-204ENST00000487386 B3GALT4O96024 378 aa7.53□□□□□ -1.2
LINC00888-204ENST00000487386 LDHBP07195 334 aaKnown RBP7.53□□□□□ -1.2
LINC00888-204ENST00000487386 IREB2P48200 963 aaKnown RBP7.53□□□□□ -1.2
LINC00888-204ENST00000487386 ARL4DP49703 201 aa7.53□□□□□ -1.2
LINC00888-204ENST00000487386 ATP2B2Q01814 1243 aa7.53□□□□□ -1.2
LINC00888-204ENST00000487386 RPS26P11Q5JNZ5 115 aaPredicted RBP7.53□□□□□ -1.2
LINC00888-204ENST00000487386 NXPE4Q6UWF7 544 aa7.53□□□□□ -1.2
LINC00888-204ENST00000487386 Q6ZS46 218 aa7.53□□□□□ -1.2
LINC00888-204ENST00000487386 KIAA1211Q6ZU35 1233 aa7.53□□□□□ -1.2
LINC00888-204ENST00000487386 SLC7A3Q8WY07 619 aa7.53□□□□□ -1.2
LINC00888-204ENST00000487386 AKTIPQ9H8T0 292 aa7.53□□□□□ -1.2
LINC00888-204ENST00000487386 GIPC1O14908 333 aa7.52□□□□□ -1.21
LINC00888-204ENST00000487386 ERCC3P19447 782 aa7.52□□□□□ -1.21
LINC00888-204ENST00000487386 OSBPL7Q9BZF2 842 aa7.52□□□□□ -1.21
LINC00888-204ENST00000487386 NRSN2Q9GZP1 204 aa7.52□□□□□ -1.21
LINC00888-204ENST00000487386 PPP4R2Q9NY27 417 aa7.52□□□□□ -1.21
LINC00888-204ENST00000487386 PRPF40AO75400 957 aaKnown RBP7.51□□□□□ -1.21
LINC00888-204ENST00000487386 ALX3O95076 343 aa7.51□□□□□ -1.21
LINC00888-204ENST00000487386 XRCC5P13010 732 aaKnown RBP7.51□□□□□ -1.21
LINC00888-204ENST00000487386 DUOXA2Q1HG44 320 aa7.51□□□□□ -1.21
LINC00888-204ENST00000487386 EAPPQ56P03 285 aaPredicted RBP7.51□□□□□ -1.21
LINC00888-204ENST00000487386 FBXO33Q7Z6M2 555 aa7.51□□□□□ -1.21
LINC00888-204ENST00000487386 DZIP1LQ8IYY4 767 aaKnown RBP7.51□□□□□ -1.21
LINC00888-204ENST00000487386 C3orf58Q8NDZ4 430 aa7.51□□□□□ -1.21
LINC00888-204ENST00000487386 TPSG1Q9NRR2 321 aa7.51□□□□□ -1.21
LINC00888-204ENST00000487386 EIF4EBP3O60516 100 aaPredicted RBP7.5□□□□□ -1.21
LINC00888-204ENST00000487386 FCGRTP55899 365 aa7.5□□□□□ -1.21
LINC00888-204ENST00000487386 NLRP12P59046 1061 aa7.5□□□□□ -1.21
LINC00888-204ENST00000487386 FAAP100Q0VG06 881 aa7.5□□□□□ -1.21
LINC00888-204ENST00000487386 DOC2BQ14184 412 aa7.5□□□□□ -1.21
LINC00888-204ENST00000487386 UBASH3BQ8TF42 649 aa7.5□□□□□ -1.21
LINC00888-204ENST00000487386 MEGF10Q96KG7 1140 aa7.5□□□□□ -1.21
LINC00888-204ENST00000487386 FRMD6Q96NE9 622 aa7.5□□□□□ -1.21
LINC00888-204ENST00000487386 SRCIN1Q9C0H9 1055 aa7.5□□□□□ -1.21
LINC00888-204ENST00000487386 ZFYVE1Q9HBF4 777 aa7.5□□□□□ -1.21
LINC00888-204ENST00000487386 GSTM4Q03013 218 aa7.49□□□□□ -1.21
LINC00888-204ENST00000487386 DTHD1Q6ZMT9 781 aa7.49□□□□□ -1.21
LINC00888-204ENST00000487386 ACAD11Q709F0 780 aa7.49□□□□□ -1.21
LINC00888-204ENST00000487386 AGGF1Q8N302 714 aaeCLIP7.49□□□□□ -1.21
LINC00888-204ENST00000487386 SPG7Q9UQ90 795 aa7.49□□□□□ -1.21
LINC00888-204ENST00000487386 LOC100289279A0A1B0GTE1 492 aa7.48□□□□□ -1.21
LINC00888-204ENST00000487386 MEGF11A6BM72 1044 aa7.48□□□□□ -1.21
LINC00888-204ENST00000487386 FGD1P98174 961 aa7.48□□□□□ -1.21
LINC00888-204ENST00000487386 TRIM56Q9BRZ2 755 aaKnown RBP7.48□□□□□ -1.21
LINC00888-204ENST00000487386 C12orf49Q9H741 205 aa7.48□□□□□ -1.21
LINC00888-204ENST00000487386 RNF19AQ9NV58 838 aa7.48□□□□□ -1.21
LINC00888-204ENST00000487386 DLGAP3O95886 979 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms