RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 UQCRHLA0A096LP55 91 aa30.64■■■□□ 2.5
HLA-C-208ENST00000487245 DYNC1I1O14576 645 aa30.64■■■□□ 2.5
HLA-C-208ENST00000487245 UQCRHP07919 91 aa30.64■■■□□ 2.5
HLA-C-208ENST00000487245 NOLC1Q14978 699 aaKnown RBP eCLIP30.64■■■□□ 2.51e-6■■■■□ 25
HLA-C-208ENST00000487245 GOLGA6L6A8MZA4 724 aa30.63■■■□□ 2.49
HLA-C-208ENST00000487245 CAVIN2O95810 425 aa30.63■■■□□ 2.49
HLA-C-208ENST00000487245 MCAMP43121 646 aa30.63■■■□□ 2.49
HLA-C-208ENST00000487245 SPATA31A1Q5TZJ5 1347 aa30.63■■■□□ 2.49
HLA-C-208ENST00000487245 CTDNEP1O95476 244 aa30.63■■■□□ 2.49
HLA-C-208ENST00000487245 PDIA3P30101 505 aaKnown RBP30.63■■■□□ 2.49
HLA-C-208ENST00000487245 ADD1P35611 737 aaKnown RBP30.63■■■□□ 2.49
HLA-C-208ENST00000487245 DDB1Q16531 1140 aa30.63■■■□□ 2.49
HLA-C-208ENST00000487245 TTLL5Q6EMB2 1281 aa30.63■■■□□ 2.49
HLA-C-208ENST00000487245 AEBP2Q6ZN18 517 aaPredicted RBP30.63■■■□□ 2.49
HLA-C-208ENST00000487245 DDX11Q96FC9 970 aa30.63■■■□□ 2.49
HLA-C-208ENST00000487245 TTC12Q9H892 705 aaPredicted RBP30.63■■■□□ 2.49
HLA-C-208ENST00000487245 CCDC87Q9NVE4 849 aa30.63■■■□□ 2.49
HLA-C-208ENST00000487245 RCOR1Q9UKL0 485 aa30.63■■■□□ 2.49
HLA-C-208ENST00000487245 WDR19Q8NEZ3 1342 aa30.62■■■□□ 2.49
HLA-C-208ENST00000487245 FGAP02671 866 aa30.62■■■□□ 2.49
HLA-C-208ENST00000487245 DDX60Q8IY21 1712 aaKnown RBP30.62■■■□□ 2.49
HLA-C-208ENST00000487245 UBN2Q6ZU65 1347 aa30.62■■■□□ 2.49
HLA-C-208ENST00000487245 NWD2Q9ULI1 1742 aa30.61■■■□□ 2.49
HLA-C-208ENST00000487245 PTPDC1A2A3K4 754 aa30.61■■■□□ 2.49
HLA-C-208ENST00000487245 ADD2P35612 726 aa30.61■■■□□ 2.49
HLA-C-208ENST00000487245 CAMK4Q16566 473 aa30.61■■■□□ 2.49
HLA-C-208ENST00000487245 ZNF830Q96NB3 372 aaPredicted RBP30.61■■■□□ 2.49
HLA-C-208ENST00000487245 PDCL3Q9H2J4 239 aa30.61■■■□□ 2.49
HLA-C-208ENST00000487245 AKAP11Q9UKA4 1901 aa30.61■■■□□ 2.49
HLA-C-208ENST00000487245 A0A0G2JLW4 131 aa30.61■■■□□ 2.49
HLA-C-208ENST00000487245 FOXP2O15409 715 aa30.61■■■□□ 2.49
HLA-C-208ENST00000487245 GPAA1O43292 621 aa30.61■■■□□ 2.49
HLA-C-208ENST00000487245 ARID4AP29374 1257 aaPredicted RBP30.61■■■□□ 2.49
HLA-C-208ENST00000487245 PUM3Q15397 648 aaKnown RBP30.61■■■□□ 2.49
HLA-C-208ENST00000487245 UBE2Q2Q8WVN8 375 aa30.61■■■□□ 2.49
HLA-C-208ENST00000487245 LPIN2Q92539 896 aa30.61■■■□□ 2.49
HLA-C-208ENST00000487245 PUS7LQ9H0K6 701 aaKnown RBP30.61■■■□□ 2.49
HLA-C-208ENST00000487245 ATRNO75882 1429 aa30.6■■■□□ 2.49
HLA-C-208ENST00000487245 UBE3CQ15386 1083 aa30.6■■■□□ 2.49
HLA-C-208ENST00000487245 TDRD7Q8NHU6 1098 aaKnown RBP30.6■■■□□ 2.49
HLA-C-208ENST00000487245 BICD2Q8TD16 824 aa30.6■■■□□ 2.49
HLA-C-208ENST00000487245 LRP5O75197 1615 aa30.6■■■□□ 2.49
HLA-C-208ENST00000487245 PARP10Q53GL7 1025 aa30.59■■■□□ 2.49
HLA-C-208ENST00000487245 INTS5Q6P9B9 1019 aaKnown RBP30.59■■■□□ 2.49
HLA-C-208ENST00000487245 NCOA7Q8NI08 942 aa30.59■■■□□ 2.49
HLA-C-208ENST00000487245 PRIMPOLQ96LW4 560 aa30.59■■■□□ 2.49
HLA-C-208ENST00000487245 CBX8Q9HC52 389 aa30.59■■■□□ 2.49
HLA-C-208ENST00000487245 ZNF213O14771 459 aa30.59■■■□□ 2.49
HLA-C-208ENST00000487245 NR1I2O75469 434 aa30.59■■■□□ 2.49
HLA-C-208ENST00000487245 ANO6Q4KMQ2 910 aa30.59■■■□□ 2.49
HLA-C-208ENST00000487245 MAP7D2Q96T17 732 aa30.58■■■□□ 2.49
HLA-C-208ENST00000487245 UTP14AQ9BVJ6 771 aaKnown RBP30.58■■■□□ 2.49
HLA-C-208ENST00000487245 LTBP4Q8N2S1 1624 aa30.58■■■□□ 2.49
HLA-C-208ENST00000487245 NRAPQ86VF7 1730 aa30.57■■■□□ 2.48
HLA-C-208ENST00000487245 DHX16O60231 1041 aaKnown RBP30.57■■■□□ 2.48
HLA-C-208ENST00000487245 FGFR2P21802 821 aa30.57■■■□□ 2.48
HLA-C-208ENST00000487245 CCT2P78371 535 aaKnown RBP30.57■■■□□ 2.48
HLA-C-208ENST00000487245 CCDC102BQ68D86 513 aa30.57■■■□□ 2.48
HLA-C-208ENST00000487245 PI16Q6UXB8 463 aa30.57■■■□□ 2.48
HLA-C-208ENST00000487245 CKAP2LQ8IYA6 745 aa30.57■■■□□ 2.48
HLA-C-208ENST00000487245 CTAGE5O15320 804 aa30.57■■■□□ 2.48
HLA-C-208ENST00000487245 MB21D2Q8IYB1 491 aaPredicted RBP30.57■■■□□ 2.48
HLA-C-208ENST00000487245 KIAA1524Q8TCG1 905 aa30.57■■■□□ 2.48
HLA-C-208ENST00000487245 ZNF396Q96N95 335 aaPredicted RBP30.57■■■□□ 2.48
HLA-C-208ENST00000487245 SLC5A1P13866 664 aa30.56■■■□□ 2.48
HLA-C-208ENST00000487245 ATP6V1AP38606 617 aa30.56■■■□□ 2.48
HLA-C-208ENST00000487245 SLC9C2Q5TAH2 1124 aa30.56■■■□□ 2.48
HLA-C-208ENST00000487245 ARHGAP30Q7Z6I6 1101 aaPredicted RBP30.56■■■□□ 2.48
HLA-C-208ENST00000487245 RALYLQ86SE5 291 aaKnown RBP30.56■■■□□ 2.48
HLA-C-208ENST00000487245 NAP1L2Q9ULW6 460 aaPredicted RBP30.56■■■□□ 2.48
HLA-C-208ENST00000487245 RREB1Q92766 1687 aa30.55■■■□□ 2.48
HLA-C-208ENST00000487245 PRC1O43663 620 aa30.55■■■□□ 2.48
HLA-C-208ENST00000487245 CRKLP46109 303 aaKnown RBP30.55■■■□□ 2.48
HLA-C-208ENST00000487245 PLCB2Q00722 1185 aa30.55■■■□□ 2.48
HLA-C-208ENST00000487245 SUSD4Q5VX71 490 aa30.55■■■□□ 2.48
HLA-C-208ENST00000487245 KCNF1Q9H3M0 494 aa30.55■■■□□ 2.48
HLA-C-208ENST00000487245 CICQ96RK0 1608 aaPredicted RBP30.55■■■□□ 2.48
HLA-C-208ENST00000487245 ARAP2Q8WZ64 1704 aa30.55■■■□□ 2.48
HLA-C-208ENST00000487245 MPNDQ8N594 471 aa30.55■■■□□ 2.48
HLA-C-208ENST00000487245 MYRIPQ8NFW9 859 aa30.55■■■□□ 2.48
HLA-C-208ENST00000487245 HAND2P61296 217 aa30.54■■■□□ 2.48
HLA-C-208ENST00000487245 CHST3Q7LGC8 479 aa30.54■■■□□ 2.48
HLA-C-208ENST00000487245 LUZP1Q86V48 1076 aa30.54■■■□□ 2.48
HLA-C-208ENST00000487245 PIH1D3Q9NQM4 214 aaKnown RBP30.54■■■□□ 2.48
HLA-C-208ENST00000487245 LOC102724428A0A0B4J2F2 783 aa30.53■■■□□ 2.48
HLA-C-208ENST00000487245 SIK1P57059 783 aa30.53■■■□□ 2.48
HLA-C-208ENST00000487245 PHKA1P46020 1223 aa30.53■■■□□ 2.48
HLA-C-208ENST00000487245 TRDNQ13061 729 aa30.53■■■□□ 2.48
HLA-C-208ENST00000487245 PLA2G4DQ86XP0 818 aa30.53■■■□□ 2.48
HLA-C-208ENST00000487245 RGS22Q8NE09 1264 aa30.53■■■□□ 2.48
HLA-C-208ENST00000487245 NCOA5Q9HCD5 579 aaKnown RBP30.53■■■□□ 2.48
HLA-C-208ENST00000487245 RTL9Q8NET4 1388 aa30.52■■■□□ 2.48
HLA-C-208ENST00000487245 SMARCC1Q92922 1105 aaPredicted RBP30.52■■■□□ 2.48
HLA-C-208ENST00000487245 MPHOSPH8Q99549 860 aa30.52■■■□□ 2.48
HLA-C-208ENST00000487245 CARMIL3Q8ND23 1372 aa30.51■■■□□ 2.48
HLA-C-208ENST00000487245 CAMTA2O94983 1202 aa30.51■■■□□ 2.47
HLA-C-208ENST00000487245 ADAMTS2O95450 1211 aa30.51■■■□□ 2.47
HLA-C-208ENST00000487245 CCDC152Q4G0S7 254 aa30.51■■■□□ 2.47
HLA-C-208ENST00000487245 SPATA31A5Q5VU36 1347 aa30.51■■■□□ 2.47
HLA-C-208ENST00000487245 SPATA31A7Q8IWB4 1347 aa30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms