RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 ZNF804BA4D1E1 1349 aa22.28■■□□□ 1.16
MCF2L-226ENST00000486210 COL1A1P02452 1464 aaPredicted RBP22.28■■□□□ 1.16
MCF2L-226ENST00000486210 H7C1W4 665 aa22.27■■□□□ 1.16
MCF2L-226ENST00000486210 GTF2IP78347 998 aa22.27■■□□□ 1.16
MCF2L-226ENST00000486210 HTTP42858 3142 aa22.27■■□□□ 1.16
MCF2L-226ENST00000486210 BCAR3O75815 825 aa22.26■■□□□ 1.15
MCF2L-226ENST00000486210 IGHMBP2P38935 993 aaKnown RBP22.26■■□□□ 1.15
MCF2L-226ENST00000486210 MAP3K11Q16584 847 aa22.26■■□□□ 1.15
MCF2L-226ENST00000486210 UBE3BQ7Z3V4 1068 aa22.26■■□□□ 1.15
MCF2L-226ENST00000486210 SMC4Q9NTJ3 1288 aa22.26■■□□□ 1.15
MCF2L-226ENST00000486210 IRS2Q9Y4H2 1338 aa22.26■■□□□ 1.15
MCF2L-226ENST00000486210 RBBP6Q7Z6E9 1792 aaKnown RBP22.25■■□□□ 1.15
MCF2L-226ENST00000486210 ALDH1A1P00352 501 aa22.25■■□□□ 1.15
MCF2L-226ENST00000486210 ITGA6P23229 1130 aa22.25■■□□□ 1.15
MCF2L-226ENST00000486210 IFNL1Q8IU54 200 aa22.25■■□□□ 1.15
MCF2L-226ENST00000486210 CERS5Q8N5B7 392 aa22.25■■□□□ 1.15
MCF2L-226ENST00000486210 DEFB129Q9H1M3 183 aa22.25■■□□□ 1.15
MCF2L-226ENST00000486210 PCDHAC2Q9Y5I4 1007 aa22.25■■□□□ 1.15
MCF2L-226ENST00000486210 MKI67P46013 3256 aaKnown RBP22.25■■□□□ 1.15
MCF2L-226ENST00000486210 MANSC4A6NHS7 340 aaPredicted RBP22.24■■□□□ 1.15
MCF2L-226ENST00000486210 IGF2BP3O00425 579 aaKnown RBP eCLIP22.24■■□□□ 1.15
MCF2L-226ENST00000486210 OTOP1Q7RTM1 612 aa22.24■■□□□ 1.15
MCF2L-226ENST00000486210 CLMNQ96JQ2 1002 aa22.24■■□□□ 1.15
MCF2L-226ENST00000486210 PLA2G12BQ9BX93 195 aa22.24■■□□□ 1.15
MCF2L-226ENST00000486210 TRIM17Q9Y577 477 aa22.24■■□□□ 1.15
MCF2L-226ENST00000486210 POTEFA5A3E0 1075 aa22.23■■□□□ 1.15
MCF2L-226ENST00000486210 SNAP23O00161 211 aa22.23■■□□□ 1.15
MCF2L-226ENST00000486210 CASP7P55210 303 aa22.23■■□□□ 1.15
MCF2L-226ENST00000486210 FLIIQ13045 1269 aa22.23■■□□□ 1.15
MCF2L-226ENST00000486210 ANKRD2Q9GZV1 360 aa22.23■■□□□ 1.15
MCF2L-226ENST00000486210 CD209Q9NNX6 404 aa22.23■■□□□ 1.15
MCF2L-226ENST00000486210 CSF1RP07333 972 aa22.22■■□□□ 1.15
MCF2L-226ENST00000486210 CHRNDQ07001 517 aa22.22■■□□□ 1.15
MCF2L-226ENST00000486210 SLC10A4Q96EP9 437 aa22.22■■□□□ 1.15
MCF2L-226ENST00000486210 WNK4Q96J92 1243 aa22.22■■□□□ 1.15
MCF2L-226ENST00000486210 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.22■■□□□ 1.15
MCF2L-226ENST00000486210 RCAN3Q9UKA8 241 aa22.22■■□□□ 1.15
MCF2L-226ENST00000486210 OTOFQ9HC10 1997 aa22.21■■□□□ 1.15
MCF2L-226ENST00000486210 CENPFP49454 3210 aa22.21■■□□□ 1.15
MCF2L-226ENST00000486210 ZBTB48P10074 688 aaPredicted RBP22.21■■□□□ 1.15
MCF2L-226ENST00000486210 INHBEP58166 350 aa22.21■■□□□ 1.15
MCF2L-226ENST00000486210 DLGAP5Q15398 846 aa22.21■■□□□ 1.15
MCF2L-226ENST00000486210 MTMR14Q8NCE2 650 aa22.21■■□□□ 1.15
MCF2L-226ENST00000486210 MPHOSPH8Q99549 860 aa22.21■■□□□ 1.15
MCF2L-226ENST00000486210 BRCA2P51587 3418 aa22.21■■□□□ 1.15
MCF2L-226ENST00000486210 AOX1Q06278 1338 aa22.21■■□□□ 1.15
MCF2L-226ENST00000486210 GCKRQ14397 625 aa22.2■■□□□ 1.14
MCF2L-226ENST00000486210 NOB1Q9ULX3 412 aaKnown RBP22.2■■□□□ 1.14
MCF2L-226ENST00000486210 GJA5P36382 358 aa22.19■■□□□ 1.14
MCF2L-226ENST00000486210 CAP1Q01518 475 aa22.19■■□□□ 1.14
MCF2L-226ENST00000486210 FKBP5Q13451 457 aaPredicted RBP22.19■■□□□ 1.14
MCF2L-226ENST00000486210 GCC1Q96CN9 775 aa22.19■■□□□ 1.14
MCF2L-226ENST00000486210 PPP2R3BQ9Y5P8 575 aa22.19■■□□□ 1.14
MCF2L-226ENST00000486210 CLRN2A0PK11 232 aa22.18■■□□□ 1.14
MCF2L-226ENST00000486210 TAF5LO75529 589 aa22.18■■□□□ 1.14
MCF2L-226ENST00000486210 NBPF12Q5TAG4 269 aaPredicted RBP22.18■■□□□ 1.14
MCF2L-226ENST00000486210 C15orf52Q6ZUT6 534 aaKnown RBP22.18■■□□□ 1.14
MCF2L-226ENST00000486210 PRMT6Q96LA8 375 aaPredicted RBP22.18■■□□□ 1.14
MCF2L-226ENST00000486210 F6X3S4 739 aa22.17■■□□□ 1.14
MCF2L-226ENST00000486210 F8W031 263 aaPredicted RBP22.17■■□□□ 1.14
MCF2L-226ENST00000486210 PPP1R12BO60237 982 aaPredicted RBP22.17■■□□□ 1.14
MCF2L-226ENST00000486210 KCNJ4P48050 445 aa22.17■■□□□ 1.14
MCF2L-226ENST00000486210 CFAP100Q494V2 611 aa22.17■■□□□ 1.14
MCF2L-226ENST00000486210 HABP4Q5JVS0 413 aaKnown RBP22.17■■□□□ 1.14
MCF2L-226ENST00000486210 INTS3Q68E01 1043 aaKnown RBP22.17■■□□□ 1.14
MCF2L-226ENST00000486210 CD99L2Q8TCZ2 262 aa22.17■■□□□ 1.14
MCF2L-226ENST00000486210 PTPN22Q9Y2R2 807 aa22.17■■□□□ 1.14
MCF2L-226ENST00000486210 SPDYE2BA6NHP3 402 aa22.16■■□□□ 1.14
MCF2L-226ENST00000486210 USP2O75604 605 aaPredicted RBP22.16■■□□□ 1.14
MCF2L-226ENST00000486210 SPDYE6P0CI01 402 aa22.16■■□□□ 1.14
MCF2L-226ENST00000486210 CRHR2Q13324 411 aa22.16■■□□□ 1.14
MCF2L-226ENST00000486210 HELBQ8NG08 1087 aaPredicted RBP22.16■■□□□ 1.14
MCF2L-226ENST00000486210 DNAAF4Q8WXU2 420 aa22.16■■□□□ 1.14
MCF2L-226ENST00000486210 PTPN18Q99952 460 aa22.16■■□□□ 1.14
MCF2L-226ENST00000486210 TNNQ9UQP3 1299 aa22.16■■□□□ 1.14
MCF2L-226ENST00000486210 UNCXA6NJT0 531 aa22.15■■□□□ 1.14
MCF2L-226ENST00000486210 IL1R1P14778 569 aa22.15■■□□□ 1.14
MCF2L-226ENST00000486210 FRAT1Q92837 279 aaPredicted RBP22.15■■□□□ 1.14
MCF2L-226ENST00000486210 ERO1AQ96HE7 468 aa22.15■■□□□ 1.14
MCF2L-226ENST00000486210 KIAA0100Q14667 2235 aaKnown RBP22.15■■□□□ 1.14
MCF2L-226ENST00000486210 CACNA1FO60840 1977 aa22.14■■□□□ 1.14
MCF2L-226ENST00000486210 PTPRCP08575 1304 aa22.14■■□□□ 1.14
MCF2L-226ENST00000486210 ANKRD18BA2A2Z9 1011 aa22.14■■□□□ 1.13
MCF2L-226ENST00000486210 VEZTQ9HBM0 779 aa22.14■■□□□ 1.13
MCF2L-226ENST00000486210 JAG2Q9Y219 1238 aa22.14■■□□□ 1.13
MCF2L-226ENST00000486210 KIF16BQ96L93 1317 aa22.13■■□□□ 1.13
MCF2L-226ENST00000486210 TESPA1A2RU30 521 aaPredicted RBP22.13■■□□□ 1.13
MCF2L-226ENST00000486210 FKBP1AP62942 108 aaKnown RBP22.13■■□□□ 1.13
MCF2L-226ENST00000486210 SUPT20HL1Q3ZLR7 823 aa22.13■■□□□ 1.13
MCF2L-226ENST00000486210 LINS1Q8NG48 757 aa22.13■■□□□ 1.13
MCF2L-226ENST00000486210 ARMC5Q96C12 935 aa22.13■■□□□ 1.13
MCF2L-226ENST00000486210 MYO1BO43795 1136 aa22.12■■□□□ 1.13
MCF2L-226ENST00000486210 EN2P19622 333 aaPredicted RBP22.12■■□□□ 1.13
MCF2L-226ENST00000486210 FOXO4P98177 505 aa22.12■■□□□ 1.13
MCF2L-226ENST00000486210 RASA3Q14644 834 aa22.12■■□□□ 1.13
MCF2L-226ENST00000486210 PLIN1O60240 522 aa22.11■■□□□ 1.13
MCF2L-226ENST00000486210 IREB2P48200 963 aaKnown RBP22.11■■□□□ 1.13
MCF2L-226ENST00000486210 ZNF804AQ7Z570 1209 aa22.11■■□□□ 1.13
MCF2L-226ENST00000486210 ANKRD13AQ8IZ07 590 aa22.11■■□□□ 1.13
MCF2L-226ENST00000486210 EFCC1Q9HA90 598 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms