RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 STAP2Q9UGK3 403 aa12.77□□□□□ -0.37
SND1-213ENST00000486037 PRUNE2Q8WUY3 3088 aa12.76□□□□□ -0.37
SND1-213ENST00000486037 CLRN2A0PK11 232 aa12.76□□□□□ -0.37
SND1-213ENST00000486037 PPP1R12BO60237 982 aaPredicted RBP12.76□□□□□ -0.37
SND1-213ENST00000486037 CDAN1Q8IWY9 1227 aa12.76□□□□□ -0.37
SND1-213ENST00000486037 SPEF2Q9C093 1822 aa12.76□□□□□ -0.37
SND1-213ENST00000486037 CERS5Q8N5B7 392 aa12.75□□□□□ -0.37
SND1-213ENST00000486037 DEFB123Q8N688 67 aa12.75□□□□□ -0.37
SND1-213ENST00000486037 MYO3BQ8WXR4 1341 aa12.75□□□□□ -0.37
SND1-213ENST00000486037 MYBBP1AQ9BQG0 1328 aaKnown RBP12.75□□□□□ -0.37
SND1-213ENST00000486037 ZFYVE28Q9HCC9 887 aa12.75□□□□□ -0.37
SND1-213ENST00000486037 MUC3AQ02505 3323 aa12.75□□□□□ -0.37
SND1-213ENST00000486037 ZNF804BA4D1E1 1349 aa12.74□□□□□ -0.37
SND1-213ENST00000486037 CCL15-CCL14A0A0B4J2E2 113 aa12.74□□□□□ -0.37
SND1-213ENST00000486037 A0A1W2PPC1 479 aa12.74□□□□□ -0.37
SND1-213ENST00000486037 GJA8P48165 433 aa12.74□□□□□ -0.37
SND1-213ENST00000486037 LACTBP83111 547 aaPredicted RBP12.74□□□□□ -0.37
SND1-213ENST00000486037 TRIM28Q13263 835 aaKnown RBP12.74□□□□□ -0.37
SND1-213ENST00000486037 CCL15Q16663 113 aa12.74□□□□□ -0.37
SND1-213ENST00000486037 CCDC152Q4G0S7 254 aa12.74□□□□□ -0.37
SND1-213ENST00000486037 TTLL5Q6EMB2 1281 aa12.74□□□□□ -0.37
SND1-213ENST00000486037 ANKRD18AQ8IVF6 992 aa12.74□□□□□ -0.37
SND1-213ENST00000486037 ZBTB38Q8NAP3 1195 aaPredicted RBP12.74□□□□□ -0.37
SND1-213ENST00000486037 MINPP1Q9UNW1 487 aa12.74□□□□□ -0.37
SND1-213ENST00000486037 ECM29Q5VYK3 1845 aa12.74□□□□□ -0.37
SND1-213ENST00000486037 ALPK3Q96L96 1907 aa12.73□□□□□ -0.37
SND1-213ENST00000486037 IREB2P48200 963 aaKnown RBP12.73□□□□□ -0.37
SND1-213ENST00000486037 CCT4P50991 539 aaKnown RBP12.73□□□□□ -0.37
SND1-213ENST00000486037 GTF2IP78347 998 aa12.73□□□□□ -0.37
SND1-213ENST00000486037 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.73□□□□□ -0.37
SND1-213ENST00000486037 ANKRD13AQ8IZ07 590 aa12.73□□□□□ -0.37
SND1-213ENST00000486037 HTATIP2Q9BUP3 242 aa12.73□□□□□ -0.37
SND1-213ENST00000486037 COA1Q9GZY4 146 aa12.73□□□□□ -0.37
SND1-213ENST00000486037 STXBP5LQ9Y2K9 1186 aa12.73□□□□□ -0.37
SND1-213ENST00000486037 UNCXA6NJT0 531 aa12.72□□□□□ -0.37
SND1-213ENST00000486037 PDE8AO60658 829 aa12.72□□□□□ -0.37
SND1-213ENST00000486037 CCL5P13501 91 aa12.72□□□□□ -0.37
SND1-213ENST00000486037 ARHGEF6Q15052 776 aa12.72□□□□□ -0.37
SND1-213ENST00000486037 DLGAP5Q15398 846 aa12.72□□□□□ -0.37
SND1-213ENST00000486037 PRMT6Q96LA8 375 aaPredicted RBP12.72□□□□□ -0.37
SND1-213ENST00000486037 VEZTQ9HBM0 779 aa12.72□□□□□ -0.37
SND1-213ENST00000486037 MRS2Q9HD23 443 aa12.72□□□□□ -0.37
SND1-213ENST00000486037 MTMR10Q9NXD2 777 aa12.72□□□□□ -0.37
SND1-213ENST00000486037 PPP2R3BQ9Y5P8 575 aa12.72□□□□□ -0.37
SND1-213ENST00000486037 NR2E3Q9Y5X4 410 aa12.72□□□□□ -0.37
SND1-213ENST00000486037 TLR2O60603 784 aa12.71□□□□□ -0.37
SND1-213ENST00000486037 FARP2O94887 1054 aaPredicted RBP12.71□□□□□ -0.37
SND1-213ENST00000486037 GJB1P08034 283 aa12.71□□□□□ -0.37
SND1-213ENST00000486037 RASA3Q14644 834 aa12.71□□□□□ -0.37
SND1-213ENST00000486037 SUPT20HL1Q3ZLR7 823 aa12.71□□□□□ -0.37
SND1-213ENST00000486037 SPDYE2BA6NHP3 402 aa12.7□□□□□ -0.38
SND1-213ENST00000486037 BTBD19C9JJ37 291 aa12.7□□□□□ -0.38
SND1-213ENST00000486037 F8W031 263 aaPredicted RBP12.7□□□□□ -0.38
SND1-213ENST00000486037 PCCAP05165 728 aaPredicted RBP12.7□□□□□ -0.38
SND1-213ENST00000486037 SPDYE6P0CI01 402 aa12.7□□□□□ -0.38
SND1-213ENST00000486037 VGLL4Q14135 290 aa12.7□□□□□ -0.38
SND1-213ENST00000486037 CFAP100Q494V2 611 aa12.7□□□□□ -0.38
SND1-213ENST00000486037 HDGFL1Q5TGJ6 251 aa12.7□□□□□ -0.38
SND1-213ENST00000486037 MTMR14Q8NCE2 650 aa12.7□□□□□ -0.38
SND1-213ENST00000486037 TRIM47Q96LD4 638 aa12.7□□□□□ -0.38
SND1-213ENST00000486037 MYD88Q99836 296 aa12.7□□□□□ -0.38
SND1-213ENST00000486037 RNF208Q9H0X6 261 aa12.7□□□□□ -0.38
SND1-213ENST00000486037 RIPOR2Q9Y4F9 1068 aa12.7□□□□□ -0.38
SND1-213ENST00000486037 SNAP23O00161 211 aa12.69□□□□□ -0.38
SND1-213ENST00000486037 EVI5O60447 810 aa12.69□□□□□ -0.38
SND1-213ENST00000486037 NEFMP07197 916 aa12.69□□□□□ -0.38
SND1-213ENST00000486037 OSBPP22059 807 aa12.69□□□□□ -0.38
SND1-213ENST00000486037 GRK4P32298 578 aa12.69□□□□□ -0.38
SND1-213ENST00000486037 MMP14P50281 582 aa12.69□□□□□ -0.38
SND1-213ENST00000486037 RIPK4P57078 832 aa12.69□□□□□ -0.38
SND1-213ENST00000486037 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.69□□□□□ -0.38
SND1-213ENST00000486037 NKX2-3Q8TAU0 364 aa12.69□□□□□ -0.38
SND1-213ENST00000486037 U2AF1L4Q8WU68 220 aaKnown RBP12.69□□□□□ -0.38
SND1-213ENST00000486037 GDF15Q99988 308 aa12.69□□□□□ -0.38
SND1-213ENST00000486037 UNC93B1Q9H1C4 597 aa12.69□□□□□ -0.38
SND1-213ENST00000486037 GREM2Q9H772 168 aa12.69□□□□□ -0.38
SND1-213ENST00000486037 BSDC1Q9NW68 430 aaPredicted RBP12.69□□□□□ -0.38
SND1-213ENST00000486037 RNF216Q9NWF9 866 aaPredicted RBP12.69□□□□□ -0.38
SND1-213ENST00000486037 BABAM1Q9NWV8 329 aa12.69□□□□□ -0.38
SND1-213ENST00000486037 SRRDQ9UH36 339 aa12.69□□□□□ -0.38
SND1-213ENST00000486037 GTF2A2P52657 109 aa12.68□□□□□ -0.38
SND1-213ENST00000486037 KIF22Q14807 665 aa12.68□□□□□ -0.38
SND1-213ENST00000486037 YTHDC1Q96MU7 727 aaKnown RBP12.68□□□□□ -0.38
SND1-213ENST00000486037 TEPSINQ96N21 525 aa12.68□□□□□ -0.38
SND1-213ENST00000486037 PHAXQ9H814 394 aaKnown RBP12.68□□□□□ -0.38
SND1-213ENST00000486037 CPA4Q9UI42 421 aa12.68□□□□□ -0.38
SND1-213ENST00000486037 JAG2Q9Y219 1238 aa12.68□□□□□ -0.38
SND1-213ENST00000486037 CDH23Q9H251 3354 aa12.68□□□□□ -0.38
SND1-213ENST00000486037 MAPK8IP3Q9UPT6 1336 aa12.67□□□□□ -0.38
SND1-213ENST00000486037 IRS2Q9Y4H2 1338 aa12.67□□□□□ -0.38
SND1-213ENST00000486037 PSMC4P43686 418 aa12.67□□□□□ -0.38
SND1-213ENST00000486037 BCAMP50895 628 aa12.67□□□□□ -0.38
SND1-213ENST00000486037 PRMT2P55345 433 aa12.67□□□□□ -0.38
SND1-213ENST00000486037 CTSWP56202 376 aa12.67□□□□□ -0.38
SND1-213ENST00000486037 GPR153Q6NV75 609 aa12.67□□□□□ -0.38
SND1-213ENST00000486037 C17orf99Q6UX52 265 aa12.67□□□□□ -0.38
SND1-213ENST00000486037 RIC3Q7Z5B4 369 aa12.67□□□□□ -0.38
SND1-213ENST00000486037 TTLL11Q8NHH1 800 aa12.67□□□□□ -0.38
SND1-213ENST00000486037 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.67□□□□□ -0.38
SND1-213ENST00000486037 CD209Q9NNX6 404 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms