RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 SETDB2Q96T68 719 aa7.11□□□□□ -1.27
COPS3-208ENST00000486032 KRTAP9-2Q9BYQ4 174 aa7.11□□□□□ -1.27
COPS3-208ENST00000486032 PPP1R1BQ9UD71 204 aaPredicted RBP7.11□□□□□ -1.27
COPS3-208ENST00000486032 PARP3Q9Y6F1 533 aa7.11□□□□□ -1.27
COPS3-208ENST00000486032 COL4A1P02462 1669 aa7.11□□□□□ -1.27
COPS3-208ENST00000486032 NUP98P52948 1817 aa7.11□□□□□ -1.27
COPS3-208ENST00000486032 ARFGEF2Q9Y6D5 1785 aa7.1□□□□□ -1.27
COPS3-208ENST00000486032 UBN2Q6ZU65 1347 aa7.1□□□□□ -1.27
COPS3-208ENST00000486032 POLRMTO00411 1230 aaKnown RBP7.1□□□□□ -1.27
COPS3-208ENST00000486032 SERPINB2P05120 415 aa7.1□□□□□ -1.27
COPS3-208ENST00000486032 IGKV5-2P06315 115 aa7.1□□□□□ -1.27
COPS3-208ENST00000486032 BMP1P13497 986 aa7.1□□□□□ -1.27
COPS3-208ENST00000486032 POLD1P28340 1107 aa7.1□□□□□ -1.27
COPS3-208ENST00000486032 BEND3Q5T5X7 828 aa7.1□□□□□ -1.27
COPS3-208ENST00000486032 C20orf194Q5TEA3 1177 aa7.1□□□□□ -1.27
COPS3-208ENST00000486032 SUSD4Q5VX71 490 aa7.1□□□□□ -1.27
COPS3-208ENST00000486032 CLEC4GQ6UXB4 293 aa7.1□□□□□ -1.27
COPS3-208ENST00000486032 TRIM46Q7Z4K8 759 aa7.1□□□□□ -1.27
COPS3-208ENST00000486032 PPP1R42Q7Z4L9 355 aa7.1□□□□□ -1.27
COPS3-208ENST00000486032 NBPF5PQ86XG9 351 aaPredicted RBP7.1□□□□□ -1.27
COPS3-208ENST00000486032 NUTM1Q86Y26 1132 aa7.1□□□□□ -1.27
COPS3-208ENST00000486032 ITPRIPQ8IWB1 547 aa7.1□□□□□ -1.27
COPS3-208ENST00000486032 TMEM57Q8N5G2 664 aa7.1□□□□□ -1.27
COPS3-208ENST00000486032 SRCIN1Q9C0H9 1055 aa7.1□□□□□ -1.27
COPS3-208ENST00000486032 TRMT112Q9UI30 125 aaKnown RBP7.1□□□□□ -1.27
COPS3-208ENST00000486032 COG6Q9Y2V7 657 aa7.1□□□□□ -1.27
COPS3-208ENST00000486032 DNMT3AQ9Y6K1 912 aaPredicted RBP7.1□□□□□ -1.27
COPS3-208ENST00000486032 BRCA1P38398 1863 aaKnown RBP7.09□□□□□ -1.27
COPS3-208ENST00000486032 NEURL1BA8MQ27 555 aa7.09□□□□□ -1.27
COPS3-208ENST00000486032 RLBP1P12271 317 aa7.09□□□□□ -1.27
COPS3-208ENST00000486032 TM4SF1P30408 202 aa7.09□□□□□ -1.27
COPS3-208ENST00000486032 CCT4P50991 539 aaKnown RBP7.09□□□□□ -1.27
COPS3-208ENST00000486032 BRPF1P55201 1214 aaPredicted RBP7.09□□□□□ -1.27
COPS3-208ENST00000486032 TRIM32Q13049 653 aa7.09□□□□□ -1.27
COPS3-208ENST00000486032 PARP10Q53GL7 1025 aa7.09□□□□□ -1.27
COPS3-208ENST00000486032 NLRP10Q86W26 655 aa7.09□□□□□ -1.27
COPS3-208ENST00000486032 ZNF34Q8IZ26 560 aa7.09□□□□□ -1.27
COPS3-208ENST00000486032 SYNE4Q8N205 404 aa7.09□□□□□ -1.27
COPS3-208ENST00000486032 LINS1Q8NG48 757 aa7.09□□□□□ -1.27
COPS3-208ENST00000486032 ARHGAP45Q92619 1136 aa7.09□□□□□ -1.27
COPS3-208ENST00000486032 FAM89AQ96GI7 184 aa7.09□□□□□ -1.27
COPS3-208ENST00000486032 ISCA1Q9BUE6 129 aa7.09□□□□□ -1.27
COPS3-208ENST00000486032 UTP14AQ9BVJ6 771 aaKnown RBP7.09□□□□□ -1.27
COPS3-208ENST00000486032 CWC25Q9NXE8 425 aaPredicted RBP7.09□□□□□ -1.27
COPS3-208ENST00000486032 C9orf78Q9NZ63 289 aaPredicted RBP7.09□□□□□ -1.27
COPS3-208ENST00000486032 ABCC4O15439 1325 aa7.08□□□□□ -1.28
COPS3-208ENST00000486032 KRTAP9-6A0A140TA67 174 aa7.08□□□□□ -1.28
COPS3-208ENST00000486032 RCCD1A6NED2 376 aa7.08□□□□□ -1.28
COPS3-208ENST00000486032 MS4A1P11836 297 aa7.08□□□□□ -1.28
COPS3-208ENST00000486032 HCLS1P14317 486 aaPredicted RBP7.08□□□□□ -1.28
COPS3-208ENST00000486032 CHRNA5P30532 468 aa7.08□□□□□ -1.28
COPS3-208ENST00000486032 ST5P78524 1137 aa7.08□□□□□ -1.28
COPS3-208ENST00000486032 GCKRQ14397 625 aa7.08□□□□□ -1.28
COPS3-208ENST00000486032 ERFEQ4G0M1 354 aa7.08□□□□□ -1.28
COPS3-208ENST00000486032 TPTE2Q6XPS3 522 aa7.08□□□□□ -1.28
COPS3-208ENST00000486032 UBE3BQ7Z3V4 1068 aa7.08□□□□□ -1.28
COPS3-208ENST00000486032 FAM160A2Q8N612 972 aaPredicted RBP7.08□□□□□ -1.28
COPS3-208ENST00000486032 CNBD1Q8NA66 436 aa7.08□□□□□ -1.28
COPS3-208ENST00000486032 CCDC191Q8NCU4 936 aa7.08□□□□□ -1.28
COPS3-208ENST00000486032 THAP11Q96EK4 314 aa7.08□□□□□ -1.28
COPS3-208ENST00000486032 CCDC85AQ96PX6 553 aaPredicted RBP7.08□□□□□ -1.28
COPS3-208ENST00000486032 CRBNQ96SW2 442 aa7.08□□□□□ -1.28
COPS3-208ENST00000486032 ATP10DQ9P241 1426 aa7.08□□□□□ -1.28
COPS3-208ENST00000486032 ANKRD36CQ5JPF3 1778 aa7.08□□□□□ -1.28
COPS3-208ENST00000486032 ABCC12Q96J65 1359 aa7.08□□□□□ -1.28
COPS3-208ENST00000486032 SH3TC1Q8TE82 1336 aa7.07□□□□□ -1.28
COPS3-208ENST00000486032 CACNA1SQ13698 1873 aa7.07□□□□□ -1.28
COPS3-208ENST00000486032 A0A0G2JLW4 131 aa7.07□□□□□ -1.28
COPS3-208ENST00000486032 ALDH1L1O75891 902 aa7.07□□□□□ -1.28
COPS3-208ENST00000486032 FMNL1O95466 1100 aaPredicted RBP7.07□□□□□ -1.28
COPS3-208ENST00000486032 NTSR2O95665 410 aa7.07□□□□□ -1.28
COPS3-208ENST00000486032 DPEP1P16444 411 aa7.07□□□□□ -1.28
COPS3-208ENST00000486032 KCNA3P22001 575 aa7.07□□□□□ -1.28
COPS3-208ENST00000486032 FOXK2Q01167 660 aa7.07□□□□□ -1.28
COPS3-208ENST00000486032 MVPQ14764 893 aaKnown RBP7.07□□□□□ -1.28
COPS3-208ENST00000486032 INTS3Q68E01 1043 aaKnown RBP7.07□□□□□ -1.28
COPS3-208ENST00000486032 PRR5LQ6MZQ0 368 aa7.07□□□□□ -1.28
COPS3-208ENST00000486032 MEIS3Q99687 375 aa7.07□□□□□ -1.28
COPS3-208ENST00000486032 NYXQ9GZU5 481 aa7.07□□□□□ -1.28
COPS3-208ENST00000486032 C1orf115Q9H7X2 142 aa7.07□□□□□ -1.28
COPS3-208ENST00000486032 CHMP3Q9Y3E7 222 aa7.07□□□□□ -1.28
COPS3-208ENST00000486032 DLEC1Q9Y238 1755 aa7.07□□□□□ -1.28
COPS3-208ENST00000486032 GRM8O00222 908 aa7.06□□□□□ -1.28
COPS3-208ENST00000486032 IRS4O14654 1257 aaPredicted RBP7.06□□□□□ -1.28
COPS3-208ENST00000486032 CAPN5O15484 640 aaPredicted RBP7.06□□□□□ -1.28
COPS3-208ENST00000486032 PCCAP05165 728 aaPredicted RBP7.06□□□□□ -1.28
COPS3-208ENST00000486032 NEFLP07196 543 aa7.06□□□□□ -1.28
COPS3-208ENST00000486032 NBPF7P0C2Y1 421 aaPredicted RBP7.06□□□□□ -1.28
COPS3-208ENST00000486032 UBTFL1P0CB47 393 aaPredicted RBP7.06□□□□□ -1.28
COPS3-208ENST00000486032 PRELPP51888 382 aa7.06□□□□□ -1.28
COPS3-208ENST00000486032 PDE3AQ14432 1141 aa7.06□□□□□ -1.28
COPS3-208ENST00000486032 ZBTB38Q8NAP3 1195 aaPredicted RBP7.06□□□□□ -1.28
COPS3-208ENST00000486032 SUCLG2Q96I99 432 aa7.06□□□□□ -1.28
COPS3-208ENST00000486032 LAMB2P55268 1798 aa7.05□□□□□ -1.28
COPS3-208ENST00000486032 H7C1W4 665 aa7.05□□□□□ -1.28
COPS3-208ENST00000486032 GNAI3P08754 354 aa7.05□□□□□ -1.28
COPS3-208ENST00000486032 TRIM28Q13263 835 aaKnown RBP7.05□□□□□ -1.28
COPS3-208ENST00000486032 C2CD5Q86YS7 1000 aa7.05□□□□□ -1.28
COPS3-208ENST00000486032 EXOC6Q8TAG9 804 aa7.05□□□□□ -1.28
COPS3-208ENST00000486032 ZNF622Q969S3 477 aaKnown RBP eCLIP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms