RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 MAK16Q9BXY0 300 aaKnown RBP11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 TMEM110-MUSTN1A8MSY1 372 aa11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 BMS1Q14692 1282 aaKnown RBP11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 WDR44Q5JSH3 913 aa11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 MRPS27Q92552 414 aaKnown RBP11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 ARHGAP45Q92619 1136 aa11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 RNF34Q969K3 372 aa11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 STMN4Q9H169 189 aaPredicted RBP11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 CGNQ9P2M7 1197 aaKnown RBP11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 ATP6V0A2Q9Y487 856 aa11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 RNF113AO15541 343 aaKnown RBP11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 STX10O60499 249 aa11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 HAUS7Q99871 368 aa11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 PLCH2O75038 1416 aa11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 SMTNP53814 917 aa11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 ARID5AQ03989 594 aa11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 UHRF1BP1LA0JNW5 1464 aa11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 SCAF11Q99590 1463 aaKnown RBP11.95□□□□□ -0.5
SRGAP3-207ENST00000485983 PCDH11XQ9BZA7 1347 aa11.94□□□□□ -0.5
SRGAP3-207ENST00000485983 PCDH11YQ9BZA8 1340 aa11.94□□□□□ -0.5
SRGAP3-207ENST00000485983 PSMC4P43686 418 aa11.94□□□□□ -0.5
SRGAP3-207ENST00000485983 BIRC3Q13489 604 aa11.94□□□□□ -0.5
SRGAP3-207ENST00000485983 DTHD1Q6ZMT9 781 aa11.94□□□□□ -0.5
SRGAP3-207ENST00000485983 Q6ZUG5 572 aa11.94□□□□□ -0.5
SRGAP3-207ENST00000485983 DHX58Q96C10 678 aa11.94□□□□□ -0.5
SRGAP3-207ENST00000485983 C16orf45Q96MC5 204 aaPredicted RBP11.94□□□□□ -0.5
SRGAP3-207ENST00000485983 TRIM6Q9C030 488 aaPredicted RBP11.94□□□□□ -0.5
SRGAP3-207ENST00000485983 NSRP1Q9H0G5 558 aaKnown RBP11.94□□□□□ -0.5
SRGAP3-207ENST00000485983 NECAB1Q8N987 351 aa11.94□□□□□ -0.5
SRGAP3-207ENST00000485983 NEK11Q8NG66 645 aa11.94□□□□□ -0.5
SRGAP3-207ENST00000485983 PARP10Q53GL7 1025 aa11.94□□□□□ -0.5
SRGAP3-207ENST00000485983 PCF11O94913 1555 aaKnown RBP11.94□□□□□ -0.5
SRGAP3-207ENST00000485983 FANCAO15360 1455 aa11.94□□□□□ -0.5
SRGAP3-207ENST00000485983 IFT74Q96LB3 600 aa11.94□□□□□ -0.5
SRGAP3-207ENST00000485983 RBM28Q9NW13 759 aaKnown RBP11.94□□□□□ -0.5
SRGAP3-207ENST00000485983 BTG4Q9NY30 223 aa11.94□□□□□ -0.5
SRGAP3-207ENST00000485983 M0QZ92 97 aa11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 HARSP12081 509 aaKnown RBP11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 BAG6P46379 1132 aa11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 CFAP58Q5T655 872 aa11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 GGA1Q9UJY5 639 aa11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 FRMD4BQ9Y2L6 1034 aa11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 POLR3GO15318 223 aaPredicted RBP11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 KRT83P78385 493 aa11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 ATP8B2P98198 1209 aa11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 CCDC65Q8IXS2 484 aa11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 SMC1BQ8NDV3 1235 aa11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 CFAP57Q96MR6 1250 aa11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 SMC6Q96SB8 1091 aa11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 KIF14Q15058 1648 aa11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 ZSCAN22P10073 491 aaPredicted RBP11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 NACA2Q9H009 215 aa11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 PKD2L1Q9P0L9 805 aa11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 ANAPC4Q9UJX5 808 aa11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 GINS2Q9Y248 185 aa11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 ZWINTO95229 277 aa11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 MARCKSP29966 332 aaPredicted RBP11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 SPC25Q9HBM1 224 aa11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 CCDC87Q9NVE4 849 aa11.93□□□□□ -0.5
SRGAP3-207ENST00000485983 C11orf95C9JLR9 678 aaPredicted RBP11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 KIF5AQ12840 1032 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 CEP135Q66GS9 1140 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 MEIS3Q99687 375 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 JAG2Q9Y219 1238 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 TEX14Q8IWB6 1497 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 MCM7P33993 719 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 SPOUT1Q5T280 376 aaKnown RBP11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 C20orf194Q5TEA3 1177 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 KIFC2Q96AC6 838 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 CCDC42Q96M95 316 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 ZBED4O75132 1171 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 PTGS1P23219 599 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 HIBADHP31937 336 aaKnown RBP11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 ZBTB16Q05516 673 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 STRN3Q13033 797 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 UVSSAQ2YD98 709 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 TTC14Q96N46 770 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 GLT8D2Q9H1C3 349 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 ADCY5O95622 1261 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 TRPC3Q13507 836 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 GPR162Q16538 588 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 DPP8Q6V1X1 898 aaPredicted RBP11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 CERS3Q8IU89 383 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 CCT6BQ92526 530 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 ZSWIM4Q9H7M6 989 aa11.92□□□□□ -0.5
SRGAP3-207ENST00000485983 CTAGE15A4D2H0 777 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 CTAGE8P0CG41 777 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 CCDC6Q16204 474 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 CTAGE6Q86UF2 777 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 FCHSD1Q86WN1 690 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 CDAN1Q8IWY9 1227 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 CTAGE4Q8IX94 777 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 KIFAP3Q92845 792 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 JAKMIP2Q96AA8 810 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 AZI2Q9H6S1 392 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 V9GYY5 206 aaPredicted RBP11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 CCDC169A6NNP5 214 aa11.91□□□□□ -0.5
SRGAP3-207ENST00000485983 TICAM2Q86XR7 235 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms