RNA–Protein interactions for RNA: ENST00000485158.1

NUP188-206, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 392 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-206ENST00000485158 MYH16Q9H6N6 1097 aa17.54■□□□□ 0.4
NUP188-206ENST00000485158 ECM29Q5VYK3 1845 aa17.54■□□□□ 0.4
NUP188-206ENST00000485158 IL16Q14005 1332 aa17.53■□□□□ 0.4
NUP188-206ENST00000485158 FLIIQ13045 1269 aa17.53■□□□□ 0.4
NUP188-206ENST00000485158 PRKG1Q13976 671 aa17.53■□□□□ 0.4
NUP188-206ENST00000485158 WWC1Q8IX03 1113 aa17.53■□□□□ 0.4
NUP188-206ENST00000485158 DNAAF4Q8WXU2 420 aa17.53■□□□□ 0.4
NUP188-206ENST00000485158 SLC10A4Q96EP9 437 aa17.53■□□□□ 0.4
NUP188-206ENST00000485158 SPDYE2BA6NHP3 402 aa17.52■□□□□ 0.4
NUP188-206ENST00000485158 IGF2BP3O00425 579 aaKnown RBP eCLIP17.52■□□□□ 0.4
NUP188-206ENST00000485158 PPP1R12BO60237 982 aaPredicted RBP17.52■□□□□ 0.4
NUP188-206ENST00000485158 SPDYE6P0CI01 402 aa17.52■□□□□ 0.4
NUP188-206ENST00000485158 SUPT20HL1Q3ZLR7 823 aa17.52■□□□□ 0.4
NUP188-206ENST00000485158 INTS3Q68E01 1043 aaKnown RBP17.52■□□□□ 0.4
NUP188-206ENST00000485158 WNK4Q96J92 1243 aa17.52■□□□□ 0.4
NUP188-206ENST00000485158 FZD1Q9UP38 647 aa17.52■□□□□ 0.4
NUP188-206ENST00000485158 CACNA1FO60840 1977 aa17.51■□□□□ 0.39
NUP188-206ENST00000485158 ANKRD18BA2A2Z9 1011 aa17.51■□□□□ 0.39
NUP188-206ENST00000485158 KCNJ4P48050 445 aa17.51■□□□□ 0.39
NUP188-206ENST00000485158 OTOP1Q7RTM1 612 aa17.51■□□□□ 0.39
NUP188-206ENST00000485158 CLMNQ96JQ2 1002 aa17.51■□□□□ 0.39
NUP188-206ENST00000485158 A0A1B0GUL6 1792 aa17.51■□□□□ 0.39
NUP188-206ENST00000485158 BRCA2P51587 3418 aa17.5■□□□□ 0.39
NUP188-206ENST00000485158 TESPA1A2RU30 521 aaPredicted RBP17.5■□□□□ 0.39
NUP188-206ENST00000485158 SNAP23O00161 211 aa17.5■□□□□ 0.39
NUP188-206ENST00000485158 MYO1BO43795 1136 aa17.5■□□□□ 0.39
NUP188-206ENST00000485158 FOXO4P98177 505 aa17.5■□□□□ 0.39
NUP188-206ENST00000485158 GCC1Q96CN9 775 aa17.5■□□□□ 0.39
NUP188-206ENST00000485158 PRMT6Q96LA8 375 aaPredicted RBP17.5■□□□□ 0.39
NUP188-206ENST00000485158 PCDHAC2Q9Y5I4 1007 aa17.5■□□□□ 0.39
NUP188-206ENST00000485158 RBBP6Q7Z6E9 1792 aaKnown RBP17.49■□□□□ 0.39
NUP188-206ENST00000485158 USP2O75604 605 aaPredicted RBP17.49■□□□□ 0.39
NUP188-206ENST00000485158 IFIT5Q13325 482 aaKnown RBP17.49■□□□□ 0.39
NUP188-206ENST00000485158 FKBP5Q13451 457 aaPredicted RBP17.49■□□□□ 0.39
NUP188-206ENST00000485158 CFAP100Q494V2 611 aa17.49■□□□□ 0.39
NUP188-206ENST00000485158 ZNF804AQ7Z570 1209 aa17.49■□□□□ 0.39
NUP188-206ENST00000485158 TRIM17Q9Y577 477 aa17.49■□□□□ 0.39
NUP188-206ENST00000485158 TAF5LO75529 589 aa17.48■□□□□ 0.39
NUP188-206ENST00000485158 NBPF12Q5TAG4 269 aaPredicted RBP17.48■□□□□ 0.39
NUP188-206ENST00000485158 ERO1AQ96HE7 468 aa17.48■□□□□ 0.39
NUP188-206ENST00000485158 PTPN22Q9Y2R2 807 aa17.48■□□□□ 0.39
NUP188-206ENST00000485158 FAM205AQ6ZU69 1335 aa17.47■□□□□ 0.39
NUP188-206ENST00000485158 KIAA0100Q14667 2235 aaKnown RBP17.47■□□□□ 0.39
NUP188-206ENST00000485158 GJA5P36382 358 aa17.47■□□□□ 0.39
NUP188-206ENST00000485158 IREB2P48200 963 aaKnown RBP17.47■□□□□ 0.39
NUP188-206ENST00000485158 OTUD7BQ6GQQ9 843 aa17.47■□□□□ 0.39
NUP188-206ENST00000485158 ANKRD13AQ8IZ07 590 aa17.47■□□□□ 0.39
NUP188-206ENST00000485158 HELBQ8NG08 1087 aaPredicted RBP17.47■□□□□ 0.39
NUP188-206ENST00000485158 ARMC5Q96C12 935 aa17.47■□□□□ 0.39
NUP188-206ENST00000485158 PTPN18Q99952 460 aa17.47■□□□□ 0.39
NUP188-206ENST00000485158 AOX1Q06278 1338 aa17.47■□□□□ 0.39
NUP188-206ENST00000485158 CLRN2A0PK11 232 aa17.46■□□□□ 0.39
NUP188-206ENST00000485158 VAMP4O75379 141 aa17.46■□□□□ 0.39
NUP188-206ENST00000485158 CRHR2Q13324 411 aa17.46■□□□□ 0.39
NUP188-206ENST00000485158 RASA3Q14644 834 aa17.46■□□□□ 0.39
NUP188-206ENST00000485158 BEND3Q5T5X7 828 aa17.46■□□□□ 0.39
NUP188-206ENST00000485158 FANCIQ9NVI1 1328 aa17.46■□□□□ 0.38
NUP188-206ENST00000485158 POTEFA5A3E0 1075 aa17.45■□□□□ 0.38
NUP188-206ENST00000485158 MS4A4AQ96JQ5 239 aa17.45■□□□□ 0.38
NUP188-206ENST00000485158 SERPINA10Q9UK55 444 aa17.45■□□□□ 0.38
NUP188-206ENST00000485158 F8W031 263 aaPredicted RBP17.44■□□□□ 0.38
NUP188-206ENST00000485158 TNFAIP1Q13829 316 aa17.44■□□□□ 0.38
NUP188-206ENST00000485158 SPDYE2Q495Y8 402 aa17.44■□□□□ 0.38
NUP188-206ENST00000485158 TDRD7Q8NHU6 1098 aaKnown RBP17.44■□□□□ 0.38
NUP188-206ENST00000485158 TEPSINQ96N21 525 aa17.44■□□□□ 0.38
NUP188-206ENST00000485158 SP3Q02447 781 aa17.43■□□□□ 0.38
NUP188-206ENST00000485158 CCDC184Q52MB2 194 aa17.43■□□□□ 0.38
NUP188-206ENST00000485158 EPHA10Q5JZY3 1008 aa17.43■□□□□ 0.38
NUP188-206ENST00000485158 LMBR1LQ6UX01 489 aa17.43■□□□□ 0.38
NUP188-206ENST00000485158 LDHAL6AQ6ZMR3 332 aa17.43■□□□□ 0.38
NUP188-206ENST00000485158 CD99L2Q8TCZ2 262 aa17.43■□□□□ 0.38
NUP188-206ENST00000485158 VEZTQ9HBM0 779 aa17.43■□□□□ 0.38
NUP188-206ENST00000485158 OTOFQ9HC10 1997 aa17.42■□□□□ 0.38
NUP188-206ENST00000485158 CAP1Q01518 475 aa17.42■□□□□ 0.38
NUP188-206ENST00000485158 UBE4AQ14139 1066 aa17.42■□□□□ 0.38
NUP188-206ENST00000485158 CCDC57Q2TAC2 916 aa17.42■□□□□ 0.38
NUP188-206ENST00000485158 WDR63Q8IWG1 891 aa17.42■□□□□ 0.38
NUP188-206ENST00000485158 EFCC1Q9HA90 598 aa17.42■□□□□ 0.38
NUP188-206ENST00000485158 ZNF70Q9UC06 446 aaPredicted RBP17.42■□□□□ 0.38
NUP188-206ENST00000485158 GRM8O00222 908 aa17.41■□□□□ 0.38
NUP188-206ENST00000485158 HABP4Q5JVS0 413 aaKnown RBP17.41■□□□□ 0.38
NUP188-206ENST00000485158 MFSD14BQ5SR56 506 aa17.41■□□□□ 0.38
NUP188-206ENST00000485158 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.41■□□□□ 0.38
NUP188-206ENST00000485158 OPTNQ96CV9 577 aa17.41■□□□□ 0.38
NUP188-206ENST00000485158 F6X3S4 739 aa17.4■□□□□ 0.38
NUP188-206ENST00000485158 RBM5P52756 815 aaKnown RBP eCLIP17.4■□□□□ 0.38
NUP188-206ENST00000485158 DZIP1LQ8IYY4 767 aaKnown RBP17.4■□□□□ 0.38
NUP188-206ENST00000485158 ZNF594Q96JF6 807 aaPredicted RBP17.4■□□□□ 0.38
NUP188-206ENST00000485158 ZNF333Q96JL9 665 aa17.4■□□□□ 0.38
NUP188-206ENST00000485158 FAM84BQ96KN1 310 aaPredicted RBP17.4■□□□□ 0.38
NUP188-206ENST00000485158 TTF2Q9UNY4 1162 aaKnown RBP17.4■□□□□ 0.38
NUP188-206ENST00000485158 JAG2Q9Y219 1238 aa17.4■□□□□ 0.38
NUP188-206ENST00000485158 ARAP2Q8WZ64 1704 aa17.4■□□□□ 0.38
NUP188-206ENST00000485158 HIBADHP31937 336 aaKnown RBP17.39■□□□□ 0.37
NUP188-206ENST00000485158 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.39■□□□□ 0.37
NUP188-206ENST00000485158 BRI3BPQ8WY22 251 aa17.39■□□□□ 0.37
NUP188-206ENST00000485158 TDRD3Q9H7E2 651 aaKnown RBP17.39■□□□□ 0.37
NUP188-206ENST00000485158 ELP3Q9H9T3 547 aa17.39■□□□□ 0.37
NUP188-206ENST00000485158 CNNM1Q9NRU3 951 aa17.39■□□□□ 0.37
NUP188-206ENST00000485158 CHMP3Q9Y3E7 222 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms