RNA–Protein interactions for RNA: ENST00000485065.1

TRUB1-202, Transcript of TruB pseudouridine synthase family member 1, humanhuman

TSL 2

Gene TRUB1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-202ENST00000485065 PDIA6Q15084 440 aa12.79□□□□□ -0.36
TRUB1-202ENST00000485065 TMEM92Q6UXU6 159 aa12.79□□□□□ -0.36
TRUB1-202ENST00000485065 NBPF11Q86T75 865 aa12.79□□□□□ -0.36
TRUB1-202ENST00000485065 CELF1Q92879 486 aaKnown RBP12.79□□□□□ -0.36
TRUB1-202ENST00000485065 RUNDC1Q96C34 613 aa12.79□□□□□ -0.36
TRUB1-202ENST00000485065 EFCC1Q9HA90 598 aa12.79□□□□□ -0.36
TRUB1-202ENST00000485065 UNCXA6NJT0 531 aa12.78□□□□□ -0.36
TRUB1-202ENST00000485065 ZBTB48P10074 688 aaPredicted RBP12.78□□□□□ -0.36
TRUB1-202ENST00000485065 ZEB1P37275 1124 aaPredicted RBP12.78□□□□□ -0.36
TRUB1-202ENST00000485065 PRAMEF18Q5VWM3 479 aa12.78□□□□□ -0.36
TRUB1-202ENST00000485065 CHL1O00533 1208 aa12.77□□□□□ -0.37
TRUB1-202ENST00000485065 RPS8P62241 208 aaKnown RBP12.77□□□□□ -0.37
TRUB1-202ENST00000485065 ARHGEF6Q15052 776 aa12.77□□□□□ -0.37
TRUB1-202ENST00000485065 NEUROD2Q15784 382 aa12.77□□□□□ -0.37
TRUB1-202ENST00000485065 OTUD7BQ6GQQ9 843 aa12.77□□□□□ -0.37
TRUB1-202ENST00000485065 PODNQ7Z5L7 613 aa12.77□□□□□ -0.37
TRUB1-202ENST00000485065 BABAM1Q9NWV8 329 aa12.77□□□□□ -0.37
TRUB1-202ENST00000485065 RBM27Q9P2N5 1060 aaKnown RBP12.77□□□□□ -0.37
TRUB1-202ENST00000485065 RANBP2P49792 3224 aaKnown RBP12.77□□□□□ -0.37
TRUB1-202ENST00000485065 COL6A3P12111 3177 aa12.77□□□□□ -0.37
TRUB1-202ENST00000485065 LAMB1P07942 1786 aa12.76□□□□□ -0.37
TRUB1-202ENST00000485065 USP17L3A6NCW0 530 aa12.76□□□□□ -0.37
TRUB1-202ENST00000485065 USP17L4A6NCW7 530 aa12.76□□□□□ -0.37
TRUB1-202ENST00000485065 SP3Q02447 781 aa12.76□□□□□ -0.37
TRUB1-202ENST00000485065 MAP3K11Q16584 847 aa12.76□□□□□ -0.37
TRUB1-202ENST00000485065 KRT24Q2M2I5 525 aa12.76□□□□□ -0.37
TRUB1-202ENST00000485065 NBPF9Q3BBW0 867 aa12.76□□□□□ -0.37
TRUB1-202ENST00000485065 USP17L1Q7RTZ2 530 aa12.76□□□□□ -0.37
TRUB1-202ENST00000485065 CD99L2Q8TCZ2 262 aa12.76□□□□□ -0.37
TRUB1-202ENST00000485065 PRO3102Q9H379 93 aa12.76□□□□□ -0.37
TRUB1-202ENST00000485065 TSPYL4Q9UJ04 414 aa12.76□□□□□ -0.37
TRUB1-202ENST00000485065 IGF2BP3O00425 579 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRUB1-202ENST00000485065 WNT10BO00744 389 aa12.75□□□□□ -0.37
TRUB1-202ENST00000485065 PROSER3Q2NL68 480 aa12.75□□□□□ -0.37
TRUB1-202ENST00000485065 COPS6Q7L5N1 327 aa12.75□□□□□ -0.37
TRUB1-202ENST00000485065 OGFOD1Q8N543 542 aa12.75□□□□□ -0.37
TRUB1-202ENST00000485065 SLC10A4Q96EP9 437 aa12.75□□□□□ -0.37
TRUB1-202ENST00000485065 GGA1Q9UJY5 639 aa12.75□□□□□ -0.37
TRUB1-202ENST00000485065 A0A1W2PPC1 479 aa12.74□□□□□ -0.37
TRUB1-202ENST00000485065 ZNF316A6NFI3 1004 aaPredicted RBP12.74□□□□□ -0.37
TRUB1-202ENST00000485065 UFL1O94874 794 aa12.74□□□□□ -0.37
TRUB1-202ENST00000485065 WDR43Q15061 677 aaKnown RBP eCLIP12.74□□□□□ -0.37
TRUB1-202ENST00000485065 SLC4A8Q2Y0W8 1093 aa12.74□□□□□ -0.37
TRUB1-202ENST00000485065 SLC9C1Q4G0N8 1177 aa12.74□□□□□ -0.37
TRUB1-202ENST00000485065 APOBEC3FQ8IUX4 373 aaKnown RBP12.74□□□□□ -0.37
TRUB1-202ENST00000485065 SCAF8Q9UPN6 1271 aaKnown RBP12.74□□□□□ -0.37
TRUB1-202ENST00000485065 MYO3BQ8WXR4 1341 aa12.73□□□□□ -0.37
TRUB1-202ENST00000485065 TESPA1A2RU30 521 aaPredicted RBP12.73□□□□□ -0.37
TRUB1-202ENST00000485065 APAF1O14727 1248 aa12.73□□□□□ -0.37
TRUB1-202ENST00000485065 ANXA1P04083 346 aa12.73□□□□□ -0.37
TRUB1-202ENST00000485065 ZNF853P0CG23 659 aa12.73□□□□□ -0.37
TRUB1-202ENST00000485065 CRHR2Q13324 411 aa12.73□□□□□ -0.37
TRUB1-202ENST00000485065 WNK4Q96J92 1243 aa12.73□□□□□ -0.37
TRUB1-202ENST00000485065 ANKIB1Q9P2G1 1089 aa12.73□□□□□ -0.37
TRUB1-202ENST00000485065 ANGEL1Q9UNK9 670 aaKnown RBP12.73□□□□□ -0.37
TRUB1-202ENST00000485065 COL1A1P02452 1464 aaPredicted RBP12.72□□□□□ -0.37
TRUB1-202ENST00000485065 EIF2S2P20042 333 aaKnown RBP12.72□□□□□ -0.37
TRUB1-202ENST00000485065 LMOD3Q0VAK6 560 aa12.72□□□□□ -0.37
TRUB1-202ENST00000485065 VARS2Q5ST30 1063 aaKnown RBP12.72□□□□□ -0.37
TRUB1-202ENST00000485065 XAGE3Q8WTP9 111 aa12.72□□□□□ -0.37
TRUB1-202ENST00000485065 PPP1R12BO60237 982 aaPredicted RBP12.71□□□□□ -0.37
TRUB1-202ENST00000485065 HSP90B1P14625 803 aaKnown RBP12.71□□□□□ -0.37
TRUB1-202ENST00000485065 CAP1Q01518 475 aa12.71□□□□□ -0.37
TRUB1-202ENST00000485065 FAM89AQ96GI7 184 aa12.71□□□□□ -0.37
TRUB1-202ENST00000485065 MS4A4AQ96JQ5 239 aa12.71□□□□□ -0.37
TRUB1-202ENST00000485065 ISCA1Q9BUE6 129 aa12.71□□□□□ -0.37
TRUB1-202ENST00000485065 ATP2B4P23634 1241 aa12.7□□□□□ -0.38
TRUB1-202ENST00000485065 AIMP1Q12904 312 aaKnown RBP12.7□□□□□ -0.38
TRUB1-202ENST00000485065 TRIM28Q13263 835 aaKnown RBP12.7□□□□□ -0.38
TRUB1-202ENST00000485065 PRKG1Q13976 671 aa12.7□□□□□ -0.38
TRUB1-202ENST00000485065 DACT2Q5SW24 774 aa12.7□□□□□ -0.38
TRUB1-202ENST00000485065 STRIP1Q5VSL9 837 aa12.7□□□□□ -0.38
TRUB1-202ENST00000485065 DPF3Q92784 378 aa12.7□□□□□ -0.38
TRUB1-202ENST00000485065 PTCH2Q9Y6C5 1203 aa12.7□□□□□ -0.38
TRUB1-202ENST00000485065 COL4A1P02462 1669 aa12.7□□□□□ -0.38
TRUB1-202ENST00000485065 XDHP47989 1333 aa12.69□□□□□ -0.38
TRUB1-202ENST00000485065 IRS4O14654 1257 aaPredicted RBP12.69□□□□□ -0.38
TRUB1-202ENST00000485065 GPR153Q6NV75 609 aa12.69□□□□□ -0.38
TRUB1-202ENST00000485065 PLBD2Q8NHP8 589 aa12.69□□□□□ -0.38
TRUB1-202ENST00000485065 ZBED3Q96IU2 234 aaPredicted RBP12.69□□□□□ -0.38
TRUB1-202ENST00000485065 MBIPQ9NS73 344 aa12.69□□□□□ -0.38
TRUB1-202ENST00000485065 LAS1LQ9Y4W2 734 aaKnown RBP12.69□□□□□ -0.38
TRUB1-202ENST00000485065 PPP2R3BQ9Y5P8 575 aa12.69□□□□□ -0.38
TRUB1-202ENST00000485065 ZNF646O15015 1829 aaPredicted RBP12.68□□□□□ -0.38
TRUB1-202ENST00000485065 GNRH1P01148 92 aa12.68□□□□□ -0.38
TRUB1-202ENST00000485065 NKX2-3Q8TAU0 364 aa12.68□□□□□ -0.38
TRUB1-202ENST00000485065 RNF166Q96A37 237 aaPredicted RBP12.68□□□□□ -0.38
TRUB1-202ENST00000485065 RNF25Q96BH1 459 aaPredicted RBP12.68□□□□□ -0.38
TRUB1-202ENST00000485065 PTPN18Q99952 460 aa12.68□□□□□ -0.38
TRUB1-202ENST00000485065 HTATIP2Q9BUP3 242 aa12.68□□□□□ -0.38
TRUB1-202ENST00000485065 DEFB129Q9H1M3 183 aa12.68□□□□□ -0.38
TRUB1-202ENST00000485065 NR2E3Q9Y5X4 410 aa12.68□□□□□ -0.38
TRUB1-202ENST00000485065 PRMT2P55345 433 aa12.67□□□□□ -0.38
TRUB1-202ENST00000485065 SUPT20HL1Q3ZLR7 823 aa12.67□□□□□ -0.38
TRUB1-202ENST00000485065 ANKRD13DQ6ZTN6 518 aa12.67□□□□□ -0.38
TRUB1-202ENST00000485065 UBE2Q1Q7Z7E8 422 aa12.67□□□□□ -0.38
TRUB1-202ENST00000485065 CLMNQ96JQ2 1002 aa12.67□□□□□ -0.38
TRUB1-202ENST00000485065 ZSWIM6Q9HCJ5 1215 aa12.67□□□□□ -0.38
TRUB1-202ENST00000485065 MED23Q9ULK4 1368 aa12.67□□□□□ -0.38
TRUB1-202ENST00000485065 WTIPA6NIX2 430 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms