RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 CERS5Q8N5B7 392 aa19.59■□□□□ 0.73
HLA-DQB1-208ENST00000484729 MYH3P11055 1940 aa19.59■□□□□ 0.73
HLA-DQB1-208ENST00000484729 CLRN2A0PK11 232 aa19.58■□□□□ 0.72
HLA-DQB1-208ENST00000484729 SNAP23O00161 211 aa19.58■□□□□ 0.72
HLA-DQB1-208ENST00000484729 PPP1R12BO60237 982 aaPredicted RBP19.58■□□□□ 0.72
HLA-DQB1-208ENST00000484729 FXR1P51114 621 aaKnown RBP eCLIP19.58■□□□□ 0.72
HLA-DQB1-208ENST00000484729 PTPN18Q99952 460 aa19.58■□□□□ 0.72
HLA-DQB1-208ENST00000484729 EFCC1Q9HA90 598 aa19.58■□□□□ 0.72
HLA-DQB1-208ENST00000484729 COL1A1P02452 1464 aaPredicted RBP19.58■□□□□ 0.72
HLA-DQB1-208ENST00000484729 AOX1Q06278 1338 aa19.57■□□□□ 0.72
HLA-DQB1-208ENST00000484729 IL16Q14005 1332 aa19.57■□□□□ 0.72
HLA-DQB1-208ENST00000484729 F8W031 263 aaPredicted RBP19.57■□□□□ 0.72
HLA-DQB1-208ENST00000484729 ANP32CO43423 234 aa19.57■□□□□ 0.72
HLA-DQB1-208ENST00000484729 SLC4A2P04920 1241 aa19.57■□□□□ 0.72
HLA-DQB1-208ENST00000484729 ITGA6P23229 1130 aa19.57■□□□□ 0.72
HLA-DQB1-208ENST00000484729 KCNJ4P48050 445 aa19.57■□□□□ 0.72
HLA-DQB1-208ENST00000484729 NBPF12Q5TAG4 269 aaPredicted RBP19.57■□□□□ 0.72
HLA-DQB1-208ENST00000484729 G2E3Q7L622 706 aa19.57■□□□□ 0.72
HLA-DQB1-208ENST00000484729 ARMC5Q96C12 935 aa19.57■□□□□ 0.72
HLA-DQB1-208ENST00000484729 ANKRD2Q9GZV1 360 aa19.57■□□□□ 0.72
HLA-DQB1-208ENST00000484729 CD209Q9NNX6 404 aa19.57■□□□□ 0.72
HLA-DQB1-208ENST00000484729 NEURL1BA8MQ27 555 aa19.56■□□□□ 0.72
HLA-DQB1-208ENST00000484729 H7C1W4 665 aa19.56■□□□□ 0.72
HLA-DQB1-208ENST00000484729 MPHOSPH8Q99549 860 aa19.56■□□□□ 0.72
HLA-DQB1-208ENST00000484729 VEZTQ9HBM0 779 aa19.56■□□□□ 0.72
HLA-DQB1-208ENST00000484729 SALL2Q9Y467 1007 aaPredicted RBP19.56■□□□□ 0.72
HLA-DQB1-208ENST00000484729 RBBP6Q7Z6E9 1792 aaKnown RBP19.56■□□□□ 0.72
HLA-DQB1-208ENST00000484729 FANCIQ9NVI1 1328 aa19.55■□□□□ 0.72
HLA-DQB1-208ENST00000484729 USP2O75604 605 aaPredicted RBP19.55■□□□□ 0.72
HLA-DQB1-208ENST00000484729 SP3Q02447 781 aa19.55■□□□□ 0.72
HLA-DQB1-208ENST00000484729 CHRNDQ07001 517 aa19.55■□□□□ 0.72
HLA-DQB1-208ENST00000484729 SUPT20HL1Q3ZLR7 823 aa19.55■□□□□ 0.72
HLA-DQB1-208ENST00000484729 CFAP100Q494V2 611 aa19.55■□□□□ 0.72
HLA-DQB1-208ENST00000484729 MTMR14Q8NCE2 650 aa19.55■□□□□ 0.72
HLA-DQB1-208ENST00000484729 PRMT6Q96LA8 375 aaPredicted RBP19.55■□□□□ 0.72
HLA-DQB1-208ENST00000484729 PPP2R3BQ9Y5P8 575 aa19.55■□□□□ 0.72
HLA-DQB1-208ENST00000484729 BRCA2P51587 3418 aa19.54■□□□□ 0.72
HLA-DQB1-208ENST00000484729 FLIIQ13045 1269 aa19.54■□□□□ 0.72
HLA-DQB1-208ENST00000484729 FKBP5Q13451 457 aaPredicted RBP19.54■□□□□ 0.72
HLA-DQB1-208ENST00000484729 OTUD7BQ6GQQ9 843 aa19.54■□□□□ 0.72
HLA-DQB1-208ENST00000484729 HELBQ8NG08 1087 aaPredicted RBP19.54■□□□□ 0.72
HLA-DQB1-208ENST00000484729 COLQQ9Y215 455 aaPredicted RBP19.54■□□□□ 0.72
HLA-DQB1-208ENST00000484729 JAG2Q9Y219 1238 aa19.54■□□□□ 0.72
HLA-DQB1-208ENST00000484729 LAMB1P07942 1786 aa19.53■□□□□ 0.72
HLA-DQB1-208ENST00000484729 SPDYE2BA6NHP3 402 aa19.53■□□□□ 0.72
HLA-DQB1-208ENST00000484729 TAF5LO75529 589 aa19.53■□□□□ 0.72
HLA-DQB1-208ENST00000484729 SPDYE6P0CI01 402 aa19.53■□□□□ 0.72
HLA-DQB1-208ENST00000484729 IREB2P48200 963 aaKnown RBP19.53■□□□□ 0.72
HLA-DQB1-208ENST00000484729 NCBP3Q53F19 620 aaKnown RBP19.53■□□□□ 0.72
HLA-DQB1-208ENST00000484729 ELP3Q9H9T3 547 aa19.53■□□□□ 0.72
HLA-DQB1-208ENST00000484729 IRS2Q9Y4H2 1338 aa19.52■□□□□ 0.72
HLA-DQB1-208ENST00000484729 MYO1BO43795 1136 aa19.52■□□□□ 0.72
HLA-DQB1-208ENST00000484729 MYCP01106 439 aaPredicted RBP19.52■□□□□ 0.72
HLA-DQB1-208ENST00000484729 RASA3Q14644 834 aa19.52■□□□□ 0.72
HLA-DQB1-208ENST00000484729 ZNF333Q96JL9 665 aa19.52■□□□□ 0.72
HLA-DQB1-208ENST00000484729 TMEM106CQ9BVX2 250 aa19.52■□□□□ 0.72
HLA-DQB1-208ENST00000484729 TESPA1A2RU30 521 aaPredicted RBP19.51■□□□□ 0.71
HLA-DQB1-208ENST00000484729 ZNF316A6NFI3 1004 aaPredicted RBP19.51■□□□□ 0.71
HLA-DQB1-208ENST00000484729 UNCXA6NJT0 531 aa19.51■□□□□ 0.71
HLA-DQB1-208ENST00000484729 RBM5P52756 815 aaKnown RBP eCLIP19.51■□□□□ 0.71
HLA-DQB1-208ENST00000484729 GCKRQ14397 625 aa19.51■□□□□ 0.71
HLA-DQB1-208ENST00000484729 ANKRD13AQ8IZ07 590 aa19.51■□□□□ 0.71
HLA-DQB1-208ENST00000484729 CNKSR2Q8WXI2 1034 aa19.51■□□□□ 0.71
HLA-DQB1-208ENST00000484729 DNAAF4Q8WXU2 420 aa19.51■□□□□ 0.71
HLA-DQB1-208ENST00000484729 OPTNQ96CV9 577 aa19.51■□□□□ 0.71
HLA-DQB1-208ENST00000484729 MYH16Q9H6N6 1097 aa19.51■□□□□ 0.71
HLA-DQB1-208ENST00000484729 ECM29Q5VYK3 1845 aa19.51■□□□□ 0.71
HLA-DQB1-208ENST00000484729 CEP290O15078 2479 aa19.5■□□□□ 0.71
HLA-DQB1-208ENST00000484729 CSF1RP07333 972 aa19.5■□□□□ 0.71
HLA-DQB1-208ENST00000484729 CASP7P55210 303 aa19.5■□□□□ 0.71
HLA-DQB1-208ENST00000484729 PLA2G12BQ9BX93 195 aa19.5■□□□□ 0.71
HLA-DQB1-208ENST00000484729 PTCH2Q9Y6C5 1203 aa19.5■□□□□ 0.71
HLA-DQB1-208ENST00000484729 EXOSC9Q06265 439 aaKnown RBP19.49■□□□□ 0.71
HLA-DQB1-208ENST00000484729 SLC9C1Q4G0N8 1177 aa19.49■□□□□ 0.71
HLA-DQB1-208ENST00000484729 WDR63Q8IWG1 891 aa19.49■□□□□ 0.71
HLA-DQB1-208ENST00000484729 CDAN1Q8IWY9 1227 aa19.49■□□□□ 0.71
HLA-DQB1-208ENST00000484729 MS4A4AQ96JQ5 239 aa19.49■□□□□ 0.71
HLA-DQB1-208ENST00000484729 IL1R1P14778 569 aa19.48■□□□□ 0.71
HLA-DQB1-208ENST00000484729 SLC4A8Q2Y0W8 1093 aa19.48■□□□□ 0.71
HLA-DQB1-208ENST00000484729 LINS1Q8NG48 757 aa19.48■□□□□ 0.71
HLA-DQB1-208ENST00000484729 BRI3BPQ8WY22 251 aa19.48■□□□□ 0.71
HLA-DQB1-208ENST00000484729 OTOFQ9HC10 1997 aa19.48■□□□□ 0.71
HLA-DQB1-208ENST00000484729 ANKRD18BA2A2Z9 1011 aa19.47■□□□□ 0.71
HLA-DQB1-208ENST00000484729 H0YGN5 161 aa19.47■□□□□ 0.71
HLA-DQB1-208ENST00000484729 VAMP4O75379 141 aa19.47■□□□□ 0.71
HLA-DQB1-208ENST00000484729 TAF1CQ15572 869 aaPredicted RBP19.47■□□□□ 0.71
HLA-DQB1-208ENST00000484729 C15orf52Q6ZUT6 534 aaKnown RBP19.47■□□□□ 0.71
HLA-DQB1-208ENST00000484729 ZNF804AQ7Z570 1209 aa19.47■□□□□ 0.71
HLA-DQB1-208ENST00000484729 TRIOBPQ9H2D6 2365 aa19.47■□□□□ 0.71
HLA-DQB1-208ENST00000484729 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.46■□□□□ 0.71
HLA-DQB1-208ENST00000484729 NBPF11Q86T75 865 aa19.46■□□□□ 0.71
HLA-DQB1-208ENST00000484729 ZNF70Q9UC06 446 aaPredicted RBP19.46■□□□□ 0.71
HLA-DQB1-208ENST00000484729 CCL15-CCL14A0A0B4J2E2 113 aa19.45■□□□□ 0.7
HLA-DQB1-208ENST00000484729 PLIN1O60240 522 aa19.45■□□□□ 0.7
HLA-DQB1-208ENST00000484729 FKBP1AP62942 108 aaKnown RBP19.45■□□□□ 0.7
HLA-DQB1-208ENST00000484729 CCL15Q16663 113 aa19.45■□□□□ 0.7
HLA-DQB1-208ENST00000484729 FAM43AQ8N2R8 423 aa19.45■□□□□ 0.7
HLA-DQB1-208ENST00000484729 SH3TC2Q8TF17 1288 aa19.45■□□□□ 0.7
HLA-DQB1-208ENST00000484729 TDRD3Q9H7E2 651 aaKnown RBP19.45■□□□□ 0.7
HLA-DQB1-208ENST00000484729 ZFYVE28Q9HCC9 887 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms