RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 KIF6Q6ZMV9 814 aa23.01■■□□□ 1.27
LIMS2-215ENST00000484252 BRINP3Q76B58 766 aa23.01■■□□□ 1.27
LIMS2-215ENST00000484252 CHST3Q7LGC8 479 aa23.01■■□□□ 1.27
LIMS2-215ENST00000484252 ILDR1Q86SU0 546 aaPredicted RBP23.01■■□□□ 1.27
LIMS2-215ENST00000484252 MRFAP1L1Q96HT8 127 aa23.01■■□□□ 1.27
LIMS2-215ENST00000484252 FTOQ9C0B1 505 aaKnown RBP eCLIP23.01■■□□□ 1.27
LIMS2-215ENST00000484252 SHANK3Q9BYB0 1731 aa23■■□□□ 1.27
LIMS2-215ENST00000484252 ADORA1P30542 326 aa23■■□□□ 1.27
LIMS2-215ENST00000484252 HSPA2P54652 639 aa23■■□□□ 1.27
LIMS2-215ENST00000484252 FSIP1Q8NA03 581 aa23■■□□□ 1.27
LIMS2-215ENST00000484252 ZBTB38Q8NAP3 1195 aaPredicted RBP23■■□□□ 1.27
LIMS2-215ENST00000484252 IFIT5Q13325 482 aaKnown RBP22.99■■□□□ 1.27
LIMS2-215ENST00000484252 MB21D2Q8IYB1 491 aaPredicted RBP22.99■■□□□ 1.27
LIMS2-215ENST00000484252 MRPS27Q92552 414 aaKnown RBP22.99■■□□□ 1.27
LIMS2-215ENST00000484252 PODXL2Q9NZ53 605 aa22.99■■□□□ 1.27
LIMS2-215ENST00000484252 NWD2Q9ULI1 1742 aa22.99■■□□□ 1.27
LIMS2-215ENST00000484252 FOXP2O15409 715 aa22.99■■□□□ 1.27
LIMS2-215ENST00000484252 PRC1O43663 620 aa22.99■■□□□ 1.27
LIMS2-215ENST00000484252 NEMFO60524 1076 aa22.99■■□□□ 1.27
LIMS2-215ENST00000484252 FGAP02671 866 aa22.99■■□□□ 1.27
LIMS2-215ENST00000484252 ADALQ6DHV7 355 aa22.99■■□□□ 1.27
LIMS2-215ENST00000484252 C11orf57Q6ZUT1 292 aaPredicted RBP22.99■■□□□ 1.27
LIMS2-215ENST00000484252 NCOA7Q8NI08 942 aa22.99■■□□□ 1.27
LIMS2-215ENST00000484252 GUCY1B3Q02153 619 aa22.98■■□□□ 1.27
LIMS2-215ENST00000484252 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.98■■□□□ 1.27
LIMS2-215ENST00000484252 TMOD3Q9NYL9 352 aa22.98■■□□□ 1.27
LIMS2-215ENST00000484252 NRBP1Q9UHY1 535 aa22.98■■□□□ 1.27
LIMS2-215ENST00000484252 YEATS4O95619 227 aa22.97■■□□□ 1.27
LIMS2-215ENST00000484252 BRAPQ7Z569 592 aa22.97■■□□□ 1.27
LIMS2-215ENST00000484252 KCNG4Q8TDN1 519 aa22.97■■□□□ 1.27
LIMS2-215ENST00000484252 C8orf76Q96K31 380 aa22.97■■□□□ 1.27
LIMS2-215ENST00000484252 NAT10Q9H0A0 1025 aaKnown RBP22.97■■□□□ 1.27
LIMS2-215ENST00000484252 CDHR2Q9BYE9 1310 aa22.97■■□□□ 1.27
LIMS2-215ENST00000484252 BECN2A8MW95 431 aa22.97■■□□□ 1.27
LIMS2-215ENST00000484252 ZAP70P43403 619 aa22.97■■□□□ 1.27
LIMS2-215ENST00000484252 RALYLQ86SE5 291 aaKnown RBP22.97■■□□□ 1.27
LIMS2-215ENST00000484252 CEP57L1Q8IYX8 460 aa22.97■■□□□ 1.27
LIMS2-215ENST00000484252 FMR1NBQ8N0W7 255 aaPredicted RBP22.97■■□□□ 1.27
LIMS2-215ENST00000484252 PCDHA7Q9UN72 937 aa22.97■■□□□ 1.27
LIMS2-215ENST00000484252 KLF18A0A0U1RQI7 1052 aa22.96■■□□□ 1.27
LIMS2-215ENST00000484252 LRMPQ12912 555 aa22.96■■□□□ 1.27
LIMS2-215ENST00000484252 ZNF512BQ96KM6 892 aaPredicted RBP22.96■■□□□ 1.27
LIMS2-215ENST00000484252 POLR3EQ9NVU0 708 aa22.96■■□□□ 1.27
LIMS2-215ENST00000484252 SOS2Q07890 1332 aaPredicted RBP22.96■■□□□ 1.27
LIMS2-215ENST00000484252 GOLGA8BA8MQT2 603 aa22.96■■□□□ 1.27
LIMS2-215ENST00000484252 ZNF213O14771 459 aa22.96■■□□□ 1.27
LIMS2-215ENST00000484252 LINC00301Q8NCQ3 95 aa22.96■■□□□ 1.27
LIMS2-215ENST00000484252 FBXO18Q8NFZ0 1043 aa22.96■■□□□ 1.27
LIMS2-215ENST00000484252 DDX60Q8IY21 1712 aaKnown RBP22.95■■□□□ 1.27
LIMS2-215ENST00000484252 HAND2P61296 217 aa22.95■■□□□ 1.26
LIMS2-215ENST00000484252 SCARF1Q14162 830 aa22.95■■□□□ 1.26
LIMS2-215ENST00000484252 ATP2B3Q16720 1220 aa22.95■■□□□ 1.26
LIMS2-215ENST00000484252 ORC3Q9UBD5 711 aaPredicted RBP22.95■■□□□ 1.26
LIMS2-215ENST00000484252 HPS5Q9UPZ3 1129 aa22.95■■□□□ 1.26
LIMS2-215ENST00000484252 RIC1Q4ADV7 1423 aa22.95■■□□□ 1.26
LIMS2-215ENST00000484252 RIOK3O14730 519 aaKnown RBP22.94■■□□□ 1.26
LIMS2-215ENST00000484252 STK38Q15208 465 aa22.94■■□□□ 1.26
LIMS2-215ENST00000484252 UTP14CQ5TAP6 766 aaKnown RBP22.94■■□□□ 1.26
LIMS2-215ENST00000484252 ZNF710Q8N1W2 664 aa22.94■■□□□ 1.26
LIMS2-215ENST00000484252 FAM89AQ96GI7 184 aa22.94■■□□□ 1.26
LIMS2-215ENST00000484252 PUS7LQ9H0K6 701 aaKnown RBP22.94■■□□□ 1.26
LIMS2-215ENST00000484252 CPLX1O14810 134 aa22.94■■□□□ 1.26
LIMS2-215ENST00000484252 GPAA1O43292 621 aa22.94■■□□□ 1.26
LIMS2-215ENST00000484252 STARD3NLO95772 234 aa22.94■■□□□ 1.26
LIMS2-215ENST00000484252 TTF1Q15361 905 aaPredicted RBP22.94■■□□□ 1.26
LIMS2-215ENST00000484252 SF3A1Q15459 793 aaKnown RBP22.94■■□□□ 1.26
LIMS2-215ENST00000484252 DHX40Q8IX18 779 aaKnown RBP22.94■■□□□ 1.26
LIMS2-215ENST00000484252 CACTINQ8WUQ7 758 aaKnown RBP22.94■■□□□ 1.26
LIMS2-215ENST00000484252 GPHNQ9NQX3 736 aaPredicted RBP22.94■■□□□ 1.26
LIMS2-215ENST00000484252 MAP3K15Q6ZN16 1313 aa22.94■■□□□ 1.26
LIMS2-215ENST00000484252 TOGARAM1Q9Y4F4 1720 aa22.94■■□□□ 1.26
LIMS2-215ENST00000484252 ANTXR2P58335 489 aa22.93■■□□□ 1.26
LIMS2-215ENST00000484252 HSP90AB3PQ58FF7 597 aa22.93■■□□□ 1.26
LIMS2-215ENST00000484252 METTL24Q5JXM2 366 aa22.93■■□□□ 1.26
LIMS2-215ENST00000484252 RIPOR2Q9Y4F9 1068 aa22.93■■□□□ 1.26
LIMS2-215ENST00000484252 ATRNO75882 1429 aa22.93■■□□□ 1.26
LIMS2-215ENST00000484252 GIGYF2Q6Y7W6 1299 aaKnown RBP22.93■■□□□ 1.26
LIMS2-215ENST00000484252 CCDC94Q9BW85 323 aaPredicted RBP22.93■■□□□ 1.26
LIMS2-215ENST00000484252 BCL2L12Q9HB09 334 aa22.93■■□□□ 1.26
LIMS2-215ENST00000484252 MYH7P12883 1935 aa22.93■■□□□ 1.26
LIMS2-215ENST00000484252 CTIFO43310 598 aaKnown RBP22.92■■□□□ 1.26
LIMS2-215ENST00000484252 CCDC144BQ3MJ40 725 aa22.92■■□□□ 1.26
LIMS2-215ENST00000484252 CCDC144CPQ8IYA2 1237 aa22.92■■□□□ 1.26
LIMS2-215ENST00000484252 SDF4Q9BRK5 362 aa22.92■■□□□ 1.26
LIMS2-215ENST00000484252 ZNF330Q9Y3S2 320 aaPredicted RBP22.92■■□□□ 1.26
LIMS2-215ENST00000484252 ADD2P35612 726 aa22.91■■□□□ 1.26
LIMS2-215ENST00000484252 TRDNQ13061 729 aa22.91■■□□□ 1.26
LIMS2-215ENST00000484252 MYSM1Q5VVJ2 828 aa22.91■■□□□ 1.26
LIMS2-215ENST00000484252 LRRC8AQ8IWT6 810 aa22.91■■□□□ 1.26
LIMS2-215ENST00000484252 DNAJC10Q8IXB1 793 aa22.91■■□□□ 1.26
LIMS2-215ENST00000484252 BPIFA3Q9BQP9 254 aa22.91■■□□□ 1.26
LIMS2-215ENST00000484252 ABCA3Q99758 1704 aa22.91■■□□□ 1.26
LIMS2-215ENST00000484252 SPTLC2O15270 562 aa22.91■■□□□ 1.26
LIMS2-215ENST00000484252 PPFIA3O75145 1194 aa22.91■■□□□ 1.26
LIMS2-215ENST00000484252 EVA1CP58658 441 aa22.91■■□□□ 1.26
LIMS2-215ENST00000484252 PAXBP1Q9Y5B6 917 aa22.91■■□□□ 1.26
LIMS2-215ENST00000484252 SMTNL1A8MU46 457 aa22.9■■□□□ 1.26
LIMS2-215ENST00000484252 RBM6P78332 1123 aaKnown RBP22.9■■□□□ 1.26
LIMS2-215ENST00000484252 LDHAL6AQ6ZMR3 332 aa22.9■■□□□ 1.26
LIMS2-215ENST00000484252 SYNE3Q6ZMZ3 975 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms