RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 TMEM110-MUSTN1A8MSY1 372 aa11.52□□□□□ -0.57
COL12A1-207ENST00000483888 AMPD3Q01432 767 aa11.52□□□□□ -0.57
COL12A1-207ENST00000483888 SPAG1Q07617 926 aa11.52□□□□□ -0.57
COL12A1-207ENST00000483888 EXOC1Q9NV70 894 aa11.52□□□□□ -0.57
COL12A1-207ENST00000483888 ERICH3Q5RHP9 1530 aa11.52□□□□□ -0.57
COL12A1-207ENST00000483888 SEC24BO95487 1268 aa11.52□□□□□ -0.57
COL12A1-207ENST00000483888 HSPA1LP34931 641 aa11.52□□□□□ -0.57
COL12A1-207ENST00000483888 SATB1Q01826 763 aa11.52□□□□□ -0.57
COL12A1-207ENST00000483888 ARID5AQ03989 594 aa11.52□□□□□ -0.57
COL12A1-207ENST00000483888 MGARPQ8TDB4 240 aa11.52□□□□□ -0.57
COL12A1-207ENST00000483888 PAK2Q13177 524 aa11.52□□□□□ -0.57
COL12A1-207ENST00000483888 SPAG5Q96R06 1193 aa11.52□□□□□ -0.57
COL12A1-207ENST00000483888 CBX8Q9HC52 389 aa11.52□□□□□ -0.57
COL12A1-207ENST00000483888 EIF3CLB5ME19 914 aaKnown RBP11.52□□□□□ -0.57
COL12A1-207ENST00000483888 PPP1R21Q6ZMI0 780 aa11.52□□□□□ -0.57
COL12A1-207ENST00000483888 EIF3CQ99613 913 aaKnown RBP11.52□□□□□ -0.57
COL12A1-207ENST00000483888 COMMD10Q9Y6G5 202 aa11.52□□□□□ -0.57
COL12A1-207ENST00000483888 DYNC1I2Q13409 638 aaKnown RBP11.51□□□□□ -0.57
COL12A1-207ENST00000483888 MAP3K7CLP57077 242 aa11.51□□□□□ -0.57
COL12A1-207ENST00000483888 GUCY2CP25092 1073 aa11.51□□□□□ -0.57
COL12A1-207ENST00000483888 GGNBP2Q9H3C7 697 aa11.51□□□□□ -0.57
COL12A1-207ENST00000483888 SCINQ9Y6U3 715 aa11.51□□□□□ -0.57
COL12A1-207ENST00000483888 GMNNO75496 209 aa11.51□□□□□ -0.57
COL12A1-207ENST00000483888 SLMAPQ14BN4 828 aa11.51□□□□□ -0.57
COL12A1-207ENST00000483888 FBXO18Q8NFZ0 1043 aa11.51□□□□□ -0.57
COL12A1-207ENST00000483888 CETN1Q12798 172 aa11.51□□□□□ -0.57
COL12A1-207ENST00000483888 PDCD2Q16342 344 aaPredicted RBP11.51□□□□□ -0.57
COL12A1-207ENST00000483888 ARMCX6Q7L4S7 300 aa11.51□□□□□ -0.57
COL12A1-207ENST00000483888 PAIP2BQ9ULR5 123 aaKnown RBP11.51□□□□□ -0.57
COL12A1-207ENST00000483888 ZFXP17010 805 aaPredicted RBP11.5□□□□□ -0.57
COL12A1-207ENST00000483888 DENND2CQ68D51 928 aa11.5□□□□□ -0.57
COL12A1-207ENST00000483888 TEX11Q8IYF3 940 aa11.5□□□□□ -0.57
COL12A1-207ENST00000483888 ATP2A3Q93084 1043 aa11.5□□□□□ -0.57
COL12A1-207ENST00000483888 AMOTQ4VCS5 1084 aa11.5□□□□□ -0.57
COL12A1-207ENST00000483888 NAA16Q6N069 864 aaPredicted RBP11.5□□□□□ -0.57
COL12A1-207ENST00000483888 CYP26C1Q6V0L0 522 aa11.5□□□□□ -0.57
COL12A1-207ENST00000483888 ZNF428Q96B54 188 aa11.5□□□□□ -0.57
COL12A1-207ENST00000483888 ABCF2Q9UG63 623 aa11.5□□□□□ -0.57
COL12A1-207ENST00000483888 GPRASP1Q5JY77 1395 aa11.5□□□□□ -0.57
COL12A1-207ENST00000483888 CALCOCO2Q13137 446 aa11.5□□□□□ -0.57
COL12A1-207ENST00000483888 DYTNA2CJ06 578 aa11.5□□□□□ -0.57
COL12A1-207ENST00000483888 SEC31AO94979 1220 aaKnown RBP11.5□□□□□ -0.57
COL12A1-207ENST00000483888 KLHL14Q9P2G3 628 aa11.5□□□□□ -0.57
COL12A1-207ENST00000483888 RNASE9P60153 205 aaKnown RBP11.5□□□□□ -0.57
COL12A1-207ENST00000483888 SSH1Q8WYL5 1049 aa11.49□□□□□ -0.57
COL12A1-207ENST00000483888 IWS1Q96ST2 819 aa11.49□□□□□ -0.57
COL12A1-207ENST00000483888 SLC12A7Q9Y666 1083 aa11.49□□□□□ -0.57
COL12A1-207ENST00000483888 PHEXP78562 749 aa11.49□□□□□ -0.57
COL12A1-207ENST00000483888 MTMR3Q13615 1198 aa11.49□□□□□ -0.57
COL12A1-207ENST00000483888 RAB34Q9BZG1 259 aa11.49□□□□□ -0.57
COL12A1-207ENST00000483888 MRPL46Q9H2W6 279 aaKnown RBP11.49□□□□□ -0.57
COL12A1-207ENST00000483888 ATP8B1O43520 1251 aa11.49□□□□□ -0.57
COL12A1-207ENST00000483888 CCDC82Q8N4S0 544 aa11.49□□□□□ -0.57
COL12A1-207ENST00000483888 CHUKO15111 745 aa11.49□□□□□ -0.57
COL12A1-207ENST00000483888 MARCKSP29966 332 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-207ENST00000483888 GNPTABQ3T906 1256 aa11.49□□□□□ -0.57
COL12A1-207ENST00000483888 GRAMD4Q6IC98 578 aa11.49□□□□□ -0.57
COL12A1-207ENST00000483888 MMRN2Q9H8L6 949 aa11.49□□□□□ -0.57
COL12A1-207ENST00000483888 GEMIN8Q9NWZ8 242 aaKnown RBP11.49□□□□□ -0.57
COL12A1-207ENST00000483888 WIZO95785 1651 aa11.49□□□□□ -0.57
COL12A1-207ENST00000483888 hCG_2014768A0A024R1R8 64 aa11.49□□□□□ -0.57
COL12A1-207ENST00000483888 UAP1Q16222 522 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-207ENST00000483888 ANKRD36BQ8N2N9 1353 aa11.49□□□□□ -0.57
COL12A1-207ENST00000483888 ACTN4O43707 911 aaKnown RBP11.49□□□□□ -0.57
COL12A1-207ENST00000483888 RNF40O75150 1001 aa11.49□□□□□ -0.57
COL12A1-207ENST00000483888 POLD1P28340 1107 aa11.49□□□□□ -0.57
COL12A1-207ENST00000483888 KRT71Q3SY84 523 aa11.49□□□□□ -0.57
COL12A1-207ENST00000483888 AEBP2Q6ZN18 517 aaPredicted RBP11.49□□□□□ -0.57
COL12A1-207ENST00000483888 CALML4Q96GE6 196 aa11.49□□□□□ -0.57
COL12A1-207ENST00000483888 ERCC5P28715 1186 aaPredicted RBP11.48□□□□□ -0.57
COL12A1-207ENST00000483888 MAP3K21Q5TCX8 1036 aa11.48□□□□□ -0.57
COL12A1-207ENST00000483888 CROCCP2Q86T23 111 aa11.48□□□□□ -0.57
COL12A1-207ENST00000483888 CEP70Q8NHQ1 597 aa11.48□□□□□ -0.57
COL12A1-207ENST00000483888 TMEM266Q2M3C6 531 aa11.48□□□□□ -0.57
COL12A1-207ENST00000483888 FBXO41Q8TF61 875 aa11.48□□□□□ -0.57
COL12A1-207ENST00000483888 BICD1Q96G01 975 aa11.48□□□□□ -0.57
COL12A1-207ENST00000483888 BOLA2Q9H3K6 86 aa11.48□□□□□ -0.57
COL12A1-207ENST00000483888 CNNM1Q9NRU3 951 aa11.48□□□□□ -0.57
COL12A1-207ENST00000483888 PDE6BP35913 854 aa11.48□□□□□ -0.57
COL12A1-207ENST00000483888 CCT6AP40227 531 aaKnown RBP11.48□□□□□ -0.57
COL12A1-207ENST00000483888 NBPF6Q5VWK0 638 aa11.48□□□□□ -0.57
COL12A1-207ENST00000483888 NBPF5PQ86XG9 351 aaPredicted RBP11.48□□□□□ -0.57
COL12A1-207ENST00000483888 IGSF22Q8N9C0 903 aa11.48□□□□□ -0.57
COL12A1-207ENST00000483888 NBPF4Q96M43 638 aa11.48□□□□□ -0.57
COL12A1-207ENST00000483888 GNL3LQ9NVN8 582 aaKnown RBP11.48□□□□□ -0.57
COL12A1-207ENST00000483888 ZNF76P36508 570 aa11.48□□□□□ -0.57
COL12A1-207ENST00000483888 ARHGAP6O43182 974 aa11.48□□□□□ -0.57
COL12A1-207ENST00000483888 TRIM27P14373 513 aa11.48□□□□□ -0.57
COL12A1-207ENST00000483888 MLECQ14165 292 aa11.48□□□□□ -0.57
COL12A1-207ENST00000483888 HDGFL1Q5TGJ6 251 aa11.48□□□□□ -0.57
COL12A1-207ENST00000483888 MYL5Q02045 173 aa11.48□□□□□ -0.57
COL12A1-207ENST00000483888 SYNCQ9H7C4 482 aa11.48□□□□□ -0.57
COL12A1-207ENST00000483888 STAT6P42226 847 aa11.47□□□□□ -0.57
COL12A1-207ENST00000483888 SKOR1P84550 965 aa11.47□□□□□ -0.57
COL12A1-207ENST00000483888 SLC4A8Q2Y0W8 1093 aa11.47□□□□□ -0.57
COL12A1-207ENST00000483888 ZNF513Q8N8E2 541 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-207ENST00000483888 STRN4Q9NRL3 753 aa11.47□□□□□ -0.57
COL12A1-207ENST00000483888 G3BP2Q9UN86 482 aaKnown RBP11.47□□□□□ -0.57
COL12A1-207ENST00000483888 A0A087WZG4 1122 aa11.47□□□□□ -0.57
COL12A1-207ENST00000483888 SDSP20132 328 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms