RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 CDKN1CP49918 316 aaPredicted RBP6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 EPHA4P54764 986 aa6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 EIF6P56537 245 aaKnown RBP6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 APOBRQ0VD83 1088 aa6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 FOXC1Q12948 553 aa6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 CBLBQ13191 982 aa6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 SQSTM1Q13501 440 aa6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 RTN1Q16799 776 aa6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 DALRD3Q5D0E6 543 aaKnown RBP6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 DDX42Q86XP3 938 aaKnown RBP eCLIP6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 NIM1KQ8IY84 436 aa6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 SMAP1Q8IYB5 467 aaPredicted RBP6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 CACTIN-AS1Q8N1I8 211 aa6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 PDILTQ8N807 584 aa6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 TEX19Q8NA77 164 aa6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 ATL2Q8NHH9 583 aa6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 SNX29Q8TEQ0 813 aa6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 IFT43Q96FT9 208 aa6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 UNC93B1Q9H1C4 597 aa6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 ZNF69Q9UC07 566 aa6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 TRAK1Q9UPV9 953 aa6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 RPS6KL1Q9Y6S9 549 aa6.46□□□□□ -1.38
R3HDM1-216ENST00000483065 MINDY4BA8MYZ0 360 aa6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 ZNF500O60304 480 aaPredicted RBP6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 IFIT2P09913 472 aaKnown RBP6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 MYCLP1P12525 358 aaPredicted RBP6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 TRAPPC10P48553 1259 aa6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 POU5F1Q01860 360 aaKnown RBP6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 CCDC85BQ15834 202 aaPredicted RBP6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 GRAMD1BQ3KR37 738 aa6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 EFCAB2Q5VUJ9 269 aa6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 CCDC70Q6NSX1 233 aa6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 SLC4A10Q6U841 1118 aa6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 KSR2Q6VAB6 950 aa6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 HDGFL2Q7Z4V5 671 aaPredicted RBP6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 JAMLQ86YT9 394 aa6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 SLC9A9Q8IVB4 645 aa6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 JMYQ8N9B5 988 aa6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 SVIPQ8NHG7 77 aa6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 NINJ1Q92982 152 aa6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 NKD1Q969G9 470 aa6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 NUDT16Q96DE0 195 aaKnown RBP6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 EAF1Q96JC9 268 aaPredicted RBP6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 SLC26A8Q96RN1 970 aa6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 CAMKK2Q96RR4 588 aa6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 ARPC5LQ9BPX5 153 aa6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 KANSL2Q9H9L4 492 aa6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 SERTAD1Q9UHV2 236 aa6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 PPM1HQ9ULR3 514 aa6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 KDM2BQ8NHM5 1336 aa6.45□□□□□ -1.38
R3HDM1-216ENST00000483065 TBX3O15119 743 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 GADD45BO75293 160 aaPredicted RBP6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 IMPDH2P12268 514 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 VEGFBP49765 207 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 MMP16P51512 607 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 WNT7BP56706 349 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 COPS2P61201 443 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 LONRF2Q1L5Z9 754 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 GFOD2Q3B7J2 385 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 TMEM95Q3KNT9 176 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 TKFCQ3LXA3 575 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 TM4SF20Q53R12 229 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 PERM1Q5SV97 790 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 TTC39BQ5VTQ0 682 aaPredicted RBP6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 TTLL5Q6EMB2 1281 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 SCUBE3Q8IX30 993 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 ST13P5Q8NFI4 369 aaPredicted RBP6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 KRTAP4-9Q9BYQ8 210 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 ZFYVE1Q9HBF4 777 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 KCNQ5Q9NR82 932 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 MAP3K20Q9NYL2 800 aaKnown RBP6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 LRFN2Q9ULH4 789 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 MAPRE3Q9UPY8 281 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 LZTS1Q9Y250 596 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 LEMD3Q9Y2U8 911 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 WASHC2CQ9Y4E1 1318 aa6.44□□□□□ -1.38
R3HDM1-216ENST00000483065 SERTM1A2A2V5 107 aa6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 A6NJY4 79 aa6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 SCGB1D2O95969 90 aa6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 NEFMP07197 916 aa6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 MYL3P08590 195 aa6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 NBPF7P0C2Y1 421 aaPredicted RBP6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 SCNN1DP51172 638 aa6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 GUCY2FP51841 1108 aa6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 NEK2P51955 445 aa6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 HIRAP54198 1017 aaPredicted RBP6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 ERVK-9P63128 1117 aa6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 PURAQ00577 322 aaKnown RBP6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 SSRP1Q08945 709 aaKnown RBP6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 PICALMQ13492 652 aa6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 DGKZQ13574 1117 aa6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 TMEM67Q5HYA8 995 aa6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 CYP2U1Q7Z449 544 aa6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 NECAB2Q7Z6G3 386 aa6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 PASD1Q8IV76 773 aa6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 TRMT44Q8IYL2 757 aaKnown RBP6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 GPR152Q8TDT2 470 aa6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 ANKRD24Q8TF21 1146 aa6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 THAP11Q96EK4 314 aa6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 SHDQ96IW2 340 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms