RNA–Protein interactions for RNA: ENST00000482791.1

SNX27-205, Transcript of sorting nexin family member 27, humanhuman

TSL 3

Gene SNX27, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-205ENST00000482791 COL13A1Q5TAT6 717 aaPredicted RBP6.15□□□□□ -1.42
SNX27-205ENST00000482791 TRIM42Q8IWZ5 723 aa6.15□□□□□ -1.42
SNX27-205ENST00000482791 POU5F2Q8N7G0 328 aa6.15□□□□□ -1.42
SNX27-205ENST00000482791 CEP120Q8N960 986 aa6.15□□□□□ -1.42
SNX27-205ENST00000482791 C1orf127Q8N9H9 656 aa6.15□□□□□ -1.42
SNX27-205ENST00000482791 DCAF11Q8TEB1 546 aa6.15□□□□□ -1.42
SNX27-205ENST00000482791 ALKBH8Q96BT7 664 aaKnown RBP6.15□□□□□ -1.42
SNX27-205ENST00000482791 DMRTB1Q96MA1 342 aa6.15□□□□□ -1.42
SNX27-205ENST00000482791 MUC3BQ9H195 1237 aa6.15□□□□□ -1.42
SNX27-205ENST00000482791 C7orf69Q9H7B7 122 aa6.15□□□□□ -1.42
SNX27-205ENST00000482791 CNTN3Q9P232 1028 aa6.15□□□□□ -1.42
SNX27-205ENST00000482791 IVNS1ABPQ9Y6Y0 642 aa6.15□□□□□ -1.42
SNX27-205ENST00000482791 A6NHS1 94 aa6.14□□□□□ -1.43
SNX27-205ENST00000482791 TM4SF5O14894 197 aa6.14□□□□□ -1.43
SNX27-205ENST00000482791 SMNDC1O75940 238 aaKnown RBP eCLIP6.14□□□□□ -1.43
SNX27-205ENST00000482791 CYP2E1P05181 493 aaPredicted RBP6.14□□□□□ -1.43
SNX27-205ENST00000482791 EDN3P14138 238 aa6.14□□□□□ -1.43
SNX27-205ENST00000482791 GLB1P16278 677 aa6.14□□□□□ -1.43
SNX27-205ENST00000482791 NCAPG2Q86XI2 1143 aa6.14□□□□□ -1.43
SNX27-205ENST00000482791 MAP4K3Q8IVH8 894 aa6.14□□□□□ -1.43
SNX27-205ENST00000482791 DCTN4Q9UJW0 460 aa6.14□□□□□ -1.43
SNX27-205ENST00000482791 IGHA2P01877 340 aa6.13□□□□□ -1.43
SNX27-205ENST00000482791 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.13□□□□□ -1.43
SNX27-205ENST00000482791 PBX4Q9BYU1 374 aa6.13□□□□□ -1.43
SNX27-205ENST00000482791 AMOTL2Q9Y2J4 779 aa6.13□□□□□ -1.43
SNX27-205ENST00000482791 GSC2O15499 205 aa6.12□□□□□ -1.43
SNX27-205ENST00000482791 INTS5Q6P9B9 1019 aaKnown RBP6.12□□□□□ -1.43
SNX27-205ENST00000482791 CBLL1Q75N03 491 aa6.12□□□□□ -1.43
SNX27-205ENST00000482791 GALNT11Q8NCW6 608 aa6.12□□□□□ -1.43
SNX27-205ENST00000482791 DNAJC25Q9H1X3 360 aa6.12□□□□□ -1.43
SNX27-205ENST00000482791 ZFYVE28Q9HCC9 887 aa6.12□□□□□ -1.43
SNX27-205ENST00000482791 KCNK4Q9NYG8 393 aa6.12□□□□□ -1.43
SNX27-205ENST00000482791 KANSL3Q9P2N6 904 aa6.12□□□□□ -1.43
SNX27-205ENST00000482791 FOXD3Q9UJU5 478 aaPredicted RBP6.12□□□□□ -1.43
SNX27-205ENST00000482791 EREGO14944 169 aa6.11□□□□□ -1.43
SNX27-205ENST00000482791 LCE5AQ5TCM9 118 aa6.11□□□□□ -1.43
SNX27-205ENST00000482791 CEP135Q66GS9 1140 aa6.11□□□□□ -1.43
SNX27-205ENST00000482791 RNF43Q68DV7 783 aa6.11□□□□□ -1.43
SNX27-205ENST00000482791 SPOCD1Q6ZMY3 1216 aa6.11□□□□□ -1.43
SNX27-205ENST00000482791 TMEM102Q8N9M5 508 aaPredicted RBP6.11□□□□□ -1.43
SNX27-205ENST00000482791 ADAM19Q9H013 955 aa6.11□□□□□ -1.43
SNX27-205ENST00000482791 RASSF4Q9H2L5 321 aa6.11□□□□□ -1.43
SNX27-205ENST00000482791 DZANK1Q9NVP4 752 aa6.11□□□□□ -1.43
SNX27-205ENST00000482791 BIN2Q9UBW5 565 aaPredicted RBP6.11□□□□□ -1.43
SNX27-205ENST00000482791 NFKBIEO00221 500 aa6.1□□□□□ -1.43
SNX27-205ENST00000482791 PTPRAP18433 802 aa6.1□□□□□ -1.43
SNX27-205ENST00000482791 ATP11AP98196 1134 aa6.1□□□□□ -1.43
SNX27-205ENST00000482791 GALNT12Q8IXK2 581 aa6.1□□□□□ -1.43
SNX27-205ENST00000482791 IL22RA1Q8N6P7 574 aa6.1□□□□□ -1.43
SNX27-205ENST00000482791 SHKBP1Q8TBC3 707 aa6.1□□□□□ -1.43
SNX27-205ENST00000482791 TRIM33Q9UPN9 1127 aa6.1□□□□□ -1.43
SNX27-205ENST00000482791 FAM177BA6PVY3 158 aa6.09□□□□□ -1.43
SNX27-205ENST00000482791 GPR182O15218 404 aa6.09□□□□□ -1.43
SNX27-205ENST00000482791 DHX15O43143 795 aaKnown RBP6.09□□□□□ -1.43
SNX27-205ENST00000482791 CPNE3O75131 537 aaKnown RBP6.09□□□□□ -1.43
SNX27-205ENST00000482791 CDC27P30260 824 aa6.09□□□□□ -1.43
SNX27-205ENST00000482791 FBLN7Q53RD9 439 aa6.09□□□□□ -1.43
SNX27-205ENST00000482791 GDF6Q6KF10 455 aaPredicted RBP6.09□□□□□ -1.43
SNX27-205ENST00000482791 ADAMTSL4Q6UY14 1074 aa6.09□□□□□ -1.43
SNX27-205ENST00000482791 WNT8BQ93098 351 aa6.09□□□□□ -1.43
SNX27-205ENST00000482791 FAM46AQ96IP4 442 aaKnown RBP6.09□□□□□ -1.43
SNX27-205ENST00000482791 BHLHE41Q9C0J9 482 aaPredicted RBP6.09□□□□□ -1.43
SNX27-205ENST00000482791 PPME1Q9Y570 386 aa6.09□□□□□ -1.43
SNX27-205ENST00000482791 PDE2AO00408 941 aaPredicted RBP6.08□□□□□ -1.44
SNX27-205ENST00000482791 GRIK1P39086 918 aa6.08□□□□□ -1.44
SNX27-205ENST00000482791 PEAR1Q5VY43 1037 aaPredicted RBP6.08□□□□□ -1.44
SNX27-205ENST00000482791 KRTAP5-3Q6L8H2 238 aa6.08□□□□□ -1.44
SNX27-205ENST00000482791 TMC7Q7Z402 723 aa6.08□□□□□ -1.44
SNX27-205ENST00000482791 POP1Q99575 1024 aaKnown RBP6.08□□□□□ -1.44
SNX27-205ENST00000482791 OSMRQ99650 979 aa6.08□□□□□ -1.44
SNX27-205ENST00000482791 DBNDD2Q9BQY9 259 aa6.08□□□□□ -1.44
SNX27-205ENST00000482791 TREHO43280 583 aa6.07□□□□□ -1.44
SNX27-205ENST00000482791 EIF4EBP3O60516 100 aaPredicted RBP6.07□□□□□ -1.44
SNX27-205ENST00000482791 ITGB5P18084 799 aa6.07□□□□□ -1.44
SNX27-205ENST00000482791 MAPK1P28482 360 aa6.07□□□□□ -1.44
SNX27-205ENST00000482791 ZNF124Q15973 351 aa6.07□□□□□ -1.44
SNX27-205ENST00000482791 KIAA0319Q5VV43 1072 aa6.07□□□□□ -1.44
SNX27-205ENST00000482791 FAM117BQ6P1L5 589 aa6.07□□□□□ -1.44
SNX27-205ENST00000482791 ZSCAN29Q8IWY8 852 aaPredicted RBP6.07□□□□□ -1.44
SNX27-205ENST00000482791 SHISA5Q8N114 240 aa6.07□□□□□ -1.44
SNX27-205ENST00000482791 TMC1Q8TDI8 760 aa6.07□□□□□ -1.44
SNX27-205ENST00000482791 NXPE3Q969Y0 559 aa6.07□□□□□ -1.44
SNX27-205ENST00000482791 ASB16Q96NS5 453 aa6.07□□□□□ -1.44
SNX27-205ENST00000482791 ZKSCAN3Q9BRR0 538 aa6.07□□□□□ -1.44
SNX27-205ENST00000482791 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.07□□□□□ -1.44
SNX27-205ENST00000482791 H3BRJ5 948 aa6.06□□□□□ -1.44
SNX27-205ENST00000482791 EIF1AYO14602 144 aaKnown RBP6.06□□□□□ -1.44
SNX27-205ENST00000482791 CABP4P57796 275 aa6.06□□□□□ -1.44
SNX27-205ENST00000482791 DSC3Q14574 896 aa6.06□□□□□ -1.44
SNX27-205ENST00000482791 ZNF648Q5T619 568 aaPredicted RBP6.06□□□□□ -1.44
SNX27-205ENST00000482791 KIAA1211Q6ZU35 1233 aa6.06□□□□□ -1.44
SNX27-205ENST00000482791 SND1Q7KZF4 910 aaKnown RBP eCLIP6.06□□□□□ -1.44
SNX27-205ENST00000482791 KLHL23Q8NBE8 558 aa6.06□□□□□ -1.44
SNX27-205ENST00000482791 BSNDQ8WZ55 320 aa6.06□□□□□ -1.44
SNX27-205ENST00000482791 CSRNP1Q96S65 589 aa6.06□□□□□ -1.44
SNX27-205ENST00000482791 NIF3L1Q9GZT8 377 aa6.06□□□□□ -1.44
SNX27-205ENST00000482791 OSGEPQ9NPF4 335 aa6.06□□□□□ -1.44
SNX27-205ENST00000482791 SOX13Q9UN79 622 aa6.06□□□□□ -1.44
SNX27-205ENST00000482791 ACPPP15309 386 aa6.05□□□□□ -1.44
SNX27-205ENST00000482791 PIP4K2BP78356 416 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms