RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 SAMD7Q7Z3H4 446 aa20.48■□□□□ 0.87
HMGN1-214ENST00000482733 ERC1Q8IUD2 1116 aa20.48■□□□□ 0.87
HMGN1-214ENST00000482733 TRPM4Q8TD43 1214 aa20.48■□□□□ 0.87
HMGN1-214ENST00000482733 MXD3Q9BW11 206 aa20.48■□□□□ 0.87
HMGN1-214ENST00000482733 TIMM10P62072 90 aa20.47■□□□□ 0.87
HMGN1-214ENST00000482733 KIF4BQ2VIQ3 1234 aa20.47■□□□□ 0.87
HMGN1-214ENST00000482733 TBC1D10BQ4KMP7 808 aaPredicted RBP20.47■□□□□ 0.87
HMGN1-214ENST00000482733 TBC1D22AQ8WUA7 517 aa20.47■□□□□ 0.87
HMGN1-214ENST00000482733 MYOZ2Q9NPC6 264 aa20.47■□□□□ 0.87
HMGN1-214ENST00000482733 PGAP2Q9UHJ9 254 aa20.47■□□□□ 0.87
HMGN1-214ENST00000482733 PSME4Q14997 1843 aa20.47■□□□□ 0.87
HMGN1-214ENST00000482733 SEMA3EO15041 775 aa20.46■□□□□ 0.87
HMGN1-214ENST00000482733 HSPA6P17066 643 aa20.46■□□□□ 0.87
HMGN1-214ENST00000482733 HIRAP54198 1017 aaPredicted RBP20.46■□□□□ 0.87
HMGN1-214ENST00000482733 RBM26Q5T8P6 1007 aaKnown RBP20.46■□□□□ 0.87
HMGN1-214ENST00000482733 SIRT2Q8IXJ6 389 aa20.46■□□□□ 0.87
HMGN1-214ENST00000482733 CNTROBQ8N137 903 aa20.46■□□□□ 0.87
HMGN1-214ENST00000482733 XAGE2Q96GT9 111 aa20.46■□□□□ 0.87
HMGN1-214ENST00000482733 NEUROD6Q96NK8 337 aa20.46■□□□□ 0.87
HMGN1-214ENST00000482733 ADAMTSL1Q8N6G6 1762 aa20.45■□□□□ 0.86
HMGN1-214ENST00000482733 MFSD14BQ5SR56 506 aa20.45■□□□□ 0.86
HMGN1-214ENST00000482733 MAP1SQ66K74 1059 aaPredicted RBP20.45■□□□□ 0.86
HMGN1-214ENST00000482733 KIAA0825Q8IV33 1275 aa20.45■□□□□ 0.86
HMGN1-214ENST00000482733 CERS5Q8N5B7 392 aa20.45■□□□□ 0.86
HMGN1-214ENST00000482733 IQSEC3Q9UPP2 1182 aaPredicted RBP20.45■□□□□ 0.86
HMGN1-214ENST00000482733 JAG2Q9Y219 1238 aa20.45■□□□□ 0.86
HMGN1-214ENST00000482733 ADORA1P30542 326 aa20.44■□□□□ 0.86
HMGN1-214ENST00000482733 CHAF1AQ13111 956 aaPredicted RBP20.44■□□□□ 0.86
HMGN1-214ENST00000482733 TNNI3KQ59H18 835 aa20.44■□□□□ 0.86
HMGN1-214ENST00000482733 GORABQ5T7V8 394 aa20.44■□□□□ 0.86
HMGN1-214ENST00000482733 CCDC102BQ68D86 513 aa20.44■□□□□ 0.86
HMGN1-214ENST00000482733 WDR66Q8TBY9 1149 aa20.44■□□□□ 0.86
HMGN1-214ENST00000482733 DENND2AQ9ULE3 1009 aa20.44■□□□□ 0.86
HMGN1-214ENST00000482733 EXOC6BQ9Y2D4 811 aa20.44■□□□□ 0.86
HMGN1-214ENST00000482733 FPGT-TNNI3KV9GXZ4 949 aa20.44■□□□□ 0.86
HMGN1-214ENST00000482733 ITGBL1O95965 494 aaPredicted RBP20.43■□□□□ 0.86
HMGN1-214ENST00000482733 EGFRP00533 1210 aa20.43■□□□□ 0.86
HMGN1-214ENST00000482733 PHKA1P46020 1223 aa20.43■□□□□ 0.86
HMGN1-214ENST00000482733 SUGT1Q9Y2Z0 365 aa20.43■□□□□ 0.86
HMGN1-214ENST00000482733 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.43■□□□□ 0.86
HMGN1-214ENST00000482733 RAB11FIP3O75154 756 aa20.42■□□□□ 0.86
HMGN1-214ENST00000482733 APLP1P51693 650 aa20.42■□□□□ 0.86
HMGN1-214ENST00000482733 AAMPQ13685 434 aa20.42■□□□□ 0.86
HMGN1-214ENST00000482733 CRBNQ96SW2 442 aa20.42■□□□□ 0.86
HMGN1-214ENST00000482733 SCARF1Q14162 830 aa20.41■□□□□ 0.86
HMGN1-214ENST00000482733 CDC37L1Q7L3B6 337 aa20.41■□□□□ 0.86
HMGN1-214ENST00000482733 DCPSQ96C86 337 aaKnown RBP20.41■□□□□ 0.86
HMGN1-214ENST00000482733 KIF1BPQ96EK5 621 aa20.41■□□□□ 0.86
HMGN1-214ENST00000482733 SUPT16HQ9Y5B9 1047 aaKnown RBP20.41■□□□□ 0.86
HMGN1-214ENST00000482733 PDS5AQ29RF7 1337 aaKnown RBP20.41■□□□□ 0.86
HMGN1-214ENST00000482733 PASKQ96RG2 1323 aa20.41■□□□□ 0.86
HMGN1-214ENST00000482733 F8W031 263 aaPredicted RBP20.4■□□□□ 0.86
HMGN1-214ENST00000482733 ZNF646O15015 1829 aaPredicted RBP20.4■□□□□ 0.86
HMGN1-214ENST00000482733 DLGAP5Q15398 846 aa20.4■□□□□ 0.86
HMGN1-214ENST00000482733 MTMR14Q8NCE2 650 aa20.4■□□□□ 0.86
HMGN1-214ENST00000482733 TTF2Q9UNY4 1162 aaKnown RBP20.4■□□□□ 0.86
HMGN1-214ENST00000482733 MAST3O60307 1309 aa20.39■□□□□ 0.85
HMGN1-214ENST00000482733 SALL1Q9NSC2 1324 aa20.39■□□□□ 0.85
HMGN1-214ENST00000482733 UQCRFS1P1P0C7P4 283 aa20.39■□□□□ 0.85
HMGN1-214ENST00000482733 CCDC158Q5M9N0 1113 aa20.39■□□□□ 0.85
HMGN1-214ENST00000482733 ZGPATQ8N5A5 531 aaKnown RBP20.39■□□□□ 0.85
HMGN1-214ENST00000482733 RHPN1Q8TCX5 695 aa20.39■□□□□ 0.85
HMGN1-214ENST00000482733 SERPINA10Q9UK55 444 aa20.39■□□□□ 0.85
HMGN1-214ENST00000482733 PITPNM2Q9BZ72 1349 aa20.38■□□□□ 0.85
HMGN1-214ENST00000482733 WNT10BO00744 389 aa20.38■□□□□ 0.85
HMGN1-214ENST00000482733 HDLBPQ00341 1268 aaKnown RBP20.38■□□□□ 0.85
HMGN1-214ENST00000482733 ZBED3Q96IU2 234 aaPredicted RBP20.38■□□□□ 0.85
HMGN1-214ENST00000482733 GGA3Q9NZ52 723 aa20.38■□□□□ 0.85
HMGN1-214ENST00000482733 ARAP2Q8WZ64 1704 aa20.38■□□□□ 0.85
HMGN1-214ENST00000482733 ARID4AP29374 1257 aaPredicted RBP20.37■□□□□ 0.85
HMGN1-214ENST00000482733 RASGRF1Q13972 1273 aa20.37■□□□□ 0.85
HMGN1-214ENST00000482733 NBPF9Q3BBW0 867 aa20.37■□□□□ 0.85
HMGN1-214ENST00000482733 CFAP100Q494V2 611 aa20.37■□□□□ 0.85
HMGN1-214ENST00000482733 ANGEL2Q5VTE6 544 aaKnown RBP20.37■□□□□ 0.85
HMGN1-214ENST00000482733 KRT26Q7Z3Y9 468 aa20.37■□□□□ 0.85
HMGN1-214ENST00000482733 SULF1Q8IWU6 871 aa20.37■□□□□ 0.85
HMGN1-214ENST00000482733 CLASRPQ8N2M8 674 aaKnown RBP20.37■□□□□ 0.85
HMGN1-214ENST00000482733 EAF2Q96CJ1 260 aaPredicted RBP20.37■□□□□ 0.85
HMGN1-214ENST00000482733 DBNDD2Q9BQY9 259 aa20.37■□□□□ 0.85
HMGN1-214ENST00000482733 MRIQ9BWK5 157 aa20.37■□□□□ 0.85
HMGN1-214ENST00000482733 MYO1BO43795 1136 aa20.36■□□□□ 0.85
HMGN1-214ENST00000482733 RBM5P52756 815 aaKnown RBP eCLIP20.36■□□□□ 0.85
HMGN1-214ENST00000482733 TTC39AQ5SRH9 613 aa20.36■□□□□ 0.85
HMGN1-214ENST00000482733 AACSQ86V21 672 aa20.36■□□□□ 0.85
HMGN1-214ENST00000482733 ZNF512BQ96KM6 892 aaPredicted RBP20.36■□□□□ 0.85
HMGN1-214ENST00000482733 GLIS2Q9BZE0 524 aaPredicted RBP20.36■□□□□ 0.85
HMGN1-214ENST00000482733 PCDHB15Q9Y5E8 787 aa20.36■□□□□ 0.85
HMGN1-214ENST00000482733 COL1A1P02452 1464 aaPredicted RBP20.36■□□□□ 0.85
HMGN1-214ENST00000482733 SPDYE2BA6NHP3 402 aa20.35■□□□□ 0.85
HMGN1-214ENST00000482733 SPDYE6P0CI01 402 aa20.35■□□□□ 0.85
HMGN1-214ENST00000482733 USP48Q86UV5 1035 aa20.35■□□□□ 0.85
HMGN1-214ENST00000482733 CCDC8Q9H0W5 538 aaPredicted RBP20.35■□□□□ 0.85
HMGN1-214ENST00000482733 DCTPP1Q9H773 170 aa20.35■□□□□ 0.85
HMGN1-214ENST00000482733 IL1RAPL2Q9NP60 686 aa20.35■□□□□ 0.85
HMGN1-214ENST00000482733 CREBZFQ9NS37 354 aa20.35■□□□□ 0.85
HMGN1-214ENST00000482733 DBNLQ9UJU6 430 aaKnown RBP20.35■□□□□ 0.85
HMGN1-214ENST00000482733 ASTN2O75129 1339 aaPredicted RBP20.34■□□□□ 0.85
HMGN1-214ENST00000482733 TMEM88BA6NKF7 163 aa20.34■□□□□ 0.85
HMGN1-214ENST00000482733 APBB1O00213 710 aa20.34■□□□□ 0.85
HMGN1-214ENST00000482733 LDHBP07195 334 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms