RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 PARP3Q9Y6F1 533 aa12.42□□□□□ -0.42
APTX-225ENST00000482687 CYP2E1P05181 493 aaPredicted RBP12.42□□□□□ -0.42
APTX-225ENST00000482687 MCCP23508 829 aa12.42□□□□□ -0.42
APTX-225ENST00000482687 RAB3GAP1Q15042 981 aa12.42□□□□□ -0.42
APTX-225ENST00000482687 HMG20BQ9P0W2 317 aa12.42□□□□□ -0.42
APTX-225ENST00000482687 NRXN2Q9P2S2 1712 aa12.41□□□□□ -0.42
APTX-225ENST00000482687 RAD50Q92878 1312 aa12.41□□□□□ -0.42
APTX-225ENST00000482687 RNF113AO15541 343 aaKnown RBP12.41□□□□□ -0.42
APTX-225ENST00000482687 UQCRFS1P1P0C7P4 283 aa12.41□□□□□ -0.42
APTX-225ENST00000482687 ARID4AP29374 1257 aaPredicted RBP12.41□□□□□ -0.42
APTX-225ENST00000482687 CLEC17AQ6ZS10 378 aa12.41□□□□□ -0.42
APTX-225ENST00000482687 RBM17Q96I25 401 aaKnown RBP12.41□□□□□ -0.42
APTX-225ENST00000482687 GPR101Q96P66 508 aaPredicted RBP12.41□□□□□ -0.42
APTX-225ENST00000482687 M0R2C6 588 aa12.4□□□□□ -0.42
APTX-225ENST00000482687 LETM1O95202 739 aaPredicted RBP12.4□□□□□ -0.42
APTX-225ENST00000482687 ZSCAN20P17040 1043 aaPredicted RBP12.4□□□□□ -0.42
APTX-225ENST00000482687 RASGRF1Q13972 1273 aa12.4□□□□□ -0.42
APTX-225ENST00000482687 PRPF40BQ6NWY9 871 aaKnown RBP12.4□□□□□ -0.42
APTX-225ENST00000482687 SPATA5Q8NB90 893 aa12.4□□□□□ -0.42
APTX-225ENST00000482687 TNPO1Q92973 898 aaKnown RBP12.4□□□□□ -0.42
APTX-225ENST00000482687 PDLIM2Q96JY6 352 aa12.4□□□□□ -0.42
APTX-225ENST00000482687 MED23Q9ULK4 1368 aa12.4□□□□□ -0.42
APTX-225ENST00000482687 CCDC171Q6TFL3 1326 aa12.4□□□□□ -0.42
APTX-225ENST00000482687 COL11A2P13942 1736 aaPredicted RBP12.4□□□□□ -0.42
APTX-225ENST00000482687 QSER1Q2KHR3 1735 aa12.4□□□□□ -0.42
APTX-225ENST00000482687 HSPA4P34932 840 aa12.4□□□□□ -0.42
APTX-225ENST00000482687 UBE4AQ14139 1066 aa12.4□□□□□ -0.42
APTX-225ENST00000482687 CRY2Q49AN0 593 aa12.4□□□□□ -0.42
APTX-225ENST00000482687 MCMDC2Q4G0Z9 681 aa12.4□□□□□ -0.42
APTX-225ENST00000482687 TAF3Q5VWG9 929 aa12.4□□□□□ -0.42
APTX-225ENST00000482687 RASEFQ8IZ41 740 aa12.4□□□□□ -0.42
APTX-225ENST00000482687 ZNF512BQ96KM6 892 aaPredicted RBP12.4□□□□□ -0.42
APTX-225ENST00000482687 ANKRD2Q9GZV1 360 aa12.4□□□□□ -0.42
APTX-225ENST00000482687 ANKIB1Q9P2G1 1089 aa12.4□□□□□ -0.42
APTX-225ENST00000482687 ZHX1Q9UKY1 873 aaPredicted RBP12.4□□□□□ -0.42
APTX-225ENST00000482687 MYH13Q9UKX3 1938 aa12.39□□□□□ -0.43
APTX-225ENST00000482687 RFX7Q2KHR2 1363 aa12.39□□□□□ -0.43
APTX-225ENST00000482687 IDH1O75874 414 aaKnown RBP12.39□□□□□ -0.43
APTX-225ENST00000482687 PDIA4P13667 645 aaKnown RBP12.39□□□□□ -0.43
APTX-225ENST00000482687 ZNF445P59923 1031 aa12.39□□□□□ -0.43
APTX-225ENST00000482687 GPSM2P81274 684 aa12.39□□□□□ -0.43
APTX-225ENST00000482687 RABEP1Q15276 862 aa12.39□□□□□ -0.43
APTX-225ENST00000482687 WASHC4Q2M389 1173 aa12.39□□□□□ -0.43
APTX-225ENST00000482687 RBM8AQ9Y5S9 174 aaKnown RBP12.39□□□□□ -0.43
APTX-225ENST00000482687 ZNF804BA4D1E1 1349 aa12.39□□□□□ -0.43
APTX-225ENST00000482687 ZMYM1Q5SVZ6 1142 aa12.38□□□□□ -0.43
APTX-225ENST00000482687 TXNRD3Q86VQ6 643 aa12.38□□□□□ -0.43
APTX-225ENST00000482687 VPS37DQ86XT2 251 aa12.38□□□□□ -0.43
APTX-225ENST00000482687 BBXQ8WY36 941 aaPredicted RBP12.38□□□□□ -0.43
APTX-225ENST00000482687 OSBP2Q969R2 916 aa12.38□□□□□ -0.43
APTX-225ENST00000482687 FAM84BQ96KN1 310 aaPredicted RBP12.38□□□□□ -0.43
APTX-225ENST00000482687 BRIP1Q9BX63 1249 aa12.38□□□□□ -0.43
APTX-225ENST00000482687 WWC3Q9ULE0 1092 aa12.38□□□□□ -0.43
APTX-225ENST00000482687 SNX14Q9Y5W7 946 aa12.38□□□□□ -0.43
APTX-225ENST00000482687 MAST3O60307 1309 aa12.38□□□□□ -0.43
APTX-225ENST00000482687 KLHL40Q2TBA0 621 aa12.38□□□□□ -0.43
APTX-225ENST00000482687 VPS53Q5VIR6 699 aa12.38□□□□□ -0.43
APTX-225ENST00000482687 FOXD4L1Q9NU39 408 aa12.38□□□□□ -0.43
APTX-225ENST00000482687 JAG2Q9Y219 1238 aa12.38□□□□□ -0.43
APTX-225ENST00000482687 DOCK2Q92608 1830 aa12.38□□□□□ -0.43
APTX-225ENST00000482687 COL1A1P02452 1464 aaPredicted RBP12.37□□□□□ -0.43
APTX-225ENST00000482687 CPA1P15085 419 aa12.37□□□□□ -0.43
APTX-225ENST00000482687 CAVIN4Q5BKX8 364 aa12.37□□□□□ -0.43
APTX-225ENST00000482687 PPP4R3BQ5MIZ7 849 aa12.37□□□□□ -0.43
APTX-225ENST00000482687 SLC9C2Q5TAH2 1124 aa12.37□□□□□ -0.43
APTX-225ENST00000482687 OLFM4Q6UX06 510 aa12.37□□□□□ -0.43
APTX-225ENST00000482687 NOL8Q76FK4 1167 aaKnown RBP12.37□□□□□ -0.43
APTX-225ENST00000482687 MAP4K1Q92918 833 aa12.37□□□□□ -0.43
APTX-225ENST00000482687 UPF3BQ9BZI7 483 aaKnown RBP12.37□□□□□ -0.43
APTX-225ENST00000482687 HELLSQ9NRZ9 838 aa12.37□□□□□ -0.43
APTX-225ENST00000482687 NSFL1CQ9UNZ2 370 aaKnown RBP12.37□□□□□ -0.43
APTX-225ENST00000482687 ZKSCAN5Q9Y2L8 839 aa12.37□□□□□ -0.43
APTX-225ENST00000482687 TAF6LQ9Y6J9 622 aa12.37□□□□□ -0.43
APTX-225ENST00000482687 KLRG2A4D1S0 409 aaPredicted RBP12.36□□□□□ -0.43
APTX-225ENST00000482687 GOLGA6L22H0YM25 854 aa12.36□□□□□ -0.43
APTX-225ENST00000482687 HOXA10P31260 410 aaPredicted RBP12.36□□□□□ -0.43
APTX-225ENST00000482687 NEK4P51957 841 aa12.36□□□□□ -0.43
APTX-225ENST00000482687 TTF1Q15361 905 aaPredicted RBP12.36□□□□□ -0.43
APTX-225ENST00000482687 CREB3L3Q68CJ9 461 aa12.36□□□□□ -0.43
APTX-225ENST00000482687 ZNF622Q969S3 477 aaKnown RBP eCLIP12.36□□□□□ -0.43
APTX-225ENST00000482687 PUS7LQ9H0K6 701 aaKnown RBP12.36□□□□□ -0.43
APTX-225ENST00000482687 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.36□□□□□ -0.43
APTX-225ENST00000482687 A0A0G2JLW4 131 aa12.36□□□□□ -0.43
APTX-225ENST00000482687 PPEF1O14829 653 aaPredicted RBP12.36□□□□□ -0.43
APTX-225ENST00000482687 SLC27A2O14975 620 aa12.36□□□□□ -0.43
APTX-225ENST00000482687 SRGNP10124 158 aa12.36□□□□□ -0.43
APTX-225ENST00000482687 PDE6AP16499 860 aa12.36□□□□□ -0.43
APTX-225ENST00000482687 ADD2P35612 726 aa12.36□□□□□ -0.43
APTX-225ENST00000482687 CHAF1AQ13111 956 aaPredicted RBP12.36□□□□□ -0.43
APTX-225ENST00000482687 NECTIN1Q15223 517 aa12.36□□□□□ -0.43
APTX-225ENST00000482687 FBXO33Q7Z6M2 555 aa12.36□□□□□ -0.43
APTX-225ENST00000482687 C2CD5Q86YS7 1000 aa12.36□□□□□ -0.43
APTX-225ENST00000482687 CRAMP1Q96RY5 1269 aa12.36□□□□□ -0.43
APTX-225ENST00000482687 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.36□□□□□ -0.43
APTX-225ENST00000482687 GNL3LQ9NVN8 582 aaKnown RBP12.36□□□□□ -0.43
APTX-225ENST00000482687 ZNF532Q9HCE3 1301 aa12.35□□□□□ -0.43
APTX-225ENST00000482687 UFL1O94874 794 aa12.35□□□□□ -0.43
APTX-225ENST00000482687 CHRNA5P30532 468 aa12.35□□□□□ -0.43
APTX-225ENST00000482687 HIBADHP31937 336 aaKnown RBP12.35□□□□□ -0.43
APTX-225ENST00000482687 PDE6BP35913 854 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms