RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 ITGB7P26010 798 aa6.9□□□□□ -1.3
GTF3A-207ENST00000482655 ORC1Q13415 861 aa6.9□□□□□ -1.3
GTF3A-207ENST00000482655 VN1R5Q7Z5H4 357 aa6.9□□□□□ -1.3
GTF3A-207ENST00000482655 UBASH3BQ8TF42 649 aa6.9□□□□□ -1.3
GTF3A-207ENST00000482655 DMRTB1Q96MA1 342 aa6.9□□□□□ -1.3
GTF3A-207ENST00000482655 LIN7BQ9HAP6 207 aa6.9□□□□□ -1.3
GTF3A-207ENST00000482655 EIF4EBP3O60516 100 aaPredicted RBP6.89□□□□□ -1.31
GTF3A-207ENST00000482655 ADAM11O75078 769 aa6.89□□□□□ -1.31
GTF3A-207ENST00000482655 USPL1Q5W0Q7 1092 aa6.89□□□□□ -1.31
GTF3A-207ENST00000482655 PRR23CQ6ZRP0 262 aa6.89□□□□□ -1.31
GTF3A-207ENST00000482655 KIAA1211Q6ZU35 1233 aa6.89□□□□□ -1.31
GTF3A-207ENST00000482655 RNF208Q9H0X6 261 aa6.89□□□□□ -1.31
GTF3A-207ENST00000482655 A0A1W2PP55 124 aa6.88□□□□□ -1.31
GTF3A-207ENST00000482655 SCO2A0A1W2PP80 73 aa6.88□□□□□ -1.31
GTF3A-207ENST00000482655 METTL12A8MUP2 240 aa6.88□□□□□ -1.31
GTF3A-207ENST00000482655 TM4SF5O14894 197 aa6.88□□□□□ -1.31
GTF3A-207ENST00000482655 GPR182O15218 404 aa6.88□□□□□ -1.31
GTF3A-207ENST00000482655 SART1O43290 800 aaKnown RBP6.88□□□□□ -1.31
GTF3A-207ENST00000482655 CCNJLQ8IV13 435 aa6.88□□□□□ -1.31
GTF3A-207ENST00000482655 UTP4Q969X6 686 aaKnown RBP6.88□□□□□ -1.31
GTF3A-207ENST00000482655 RUSC1Q9BVN2 902 aa6.88□□□□□ -1.31
GTF3A-207ENST00000482655 USP26Q9BXU7 913 aa6.88□□□□□ -1.31
GTF3A-207ENST00000482655 RBCK1Q9BYM8 510 aa6.88□□□□□ -1.31
GTF3A-207ENST00000482655 NIF3L1Q9GZT8 377 aa6.88□□□□□ -1.31
GTF3A-207ENST00000482655 DNAJC25Q9H1X3 360 aa6.88□□□□□ -1.31
GTF3A-207ENST00000482655 EHD4Q9H223 541 aa6.88□□□□□ -1.31
GTF3A-207ENST00000482655 SOX17Q9H6I2 414 aaPredicted RBP6.88□□□□□ -1.31
GTF3A-207ENST00000482655 NPHS2Q9NP85 383 aa6.88□□□□□ -1.31
GTF3A-207ENST00000482655 DCTN4Q9UJW0 460 aa6.88□□□□□ -1.31
GTF3A-207ENST00000482655 A0A096LPE4 126 aa6.87□□□□□ -1.31
GTF3A-207ENST00000482655 A0A1W2PPZ6 126 aa6.87□□□□□ -1.31
GTF3A-207ENST00000482655 SOX1O00570 391 aaPredicted RBP6.87□□□□□ -1.31
GTF3A-207ENST00000482655 EIF1AYO14602 144 aaKnown RBP6.87□□□□□ -1.31
GTF3A-207ENST00000482655 DHX15O43143 795 aaKnown RBP6.87□□□□□ -1.31
GTF3A-207ENST00000482655 UVSSAQ2YD98 709 aa6.87□□□□□ -1.31
GTF3A-207ENST00000482655 ANKRD34AQ69YU3 496 aa6.87□□□□□ -1.31
GTF3A-207ENST00000482655 FDX2Q6P4F2 183 aa6.87□□□□□ -1.31
GTF3A-207ENST00000482655 UBL7Q96S82 380 aaPredicted RBP6.87□□□□□ -1.31
GTF3A-207ENST00000482655 CLEC4MQ9H2X3 399 aaPredicted RBP6.87□□□□□ -1.31
GTF3A-207ENST00000482655 GADD45BO75293 160 aaPredicted RBP6.86□□□□□ -1.31
GTF3A-207ENST00000482655 ESRRAP11474 423 aaPredicted RBP6.86□□□□□ -1.31
GTF3A-207ENST00000482655 MAPK1P28482 360 aa6.86□□□□□ -1.31
GTF3A-207ENST00000482655 GSTM4Q03013 218 aa6.86□□□□□ -1.31
GTF3A-207ENST00000482655 PCDH1Q08174 1060 aa6.86□□□□□ -1.31
GTF3A-207ENST00000482655 KCNA1Q09470 495 aa6.86□□□□□ -1.31
GTF3A-207ENST00000482655 KIAA0319Q5VV43 1072 aa6.86□□□□□ -1.31
GTF3A-207ENST00000482655 ALKBH8Q96BT7 664 aaKnown RBP6.86□□□□□ -1.31
GTF3A-207ENST00000482655 TCF12Q99081 682 aa6.86□□□□□ -1.31
GTF3A-207ENST00000482655 GRIA4P48058 902 aa6.85□□□□□ -1.31
GTF3A-207ENST00000482655 HGSNATQ68CP4 663 aa6.85□□□□□ -1.31
GTF3A-207ENST00000482655 TMC7Q7Z402 723 aa6.85□□□□□ -1.31
GTF3A-207ENST00000482655 HOMEZQ8IX15 550 aa6.85□□□□□ -1.31
GTF3A-207ENST00000482655 Q8N3U1 123 aa6.85□□□□□ -1.31
GTF3A-207ENST00000482655 DDX54Q8TDD1 881 aaKnown RBP6.85□□□□□ -1.31
GTF3A-207ENST00000482655 CCDC74AQ96AQ1 378 aa6.85□□□□□ -1.31
GTF3A-207ENST00000482655 CSRNP1Q96S65 589 aa6.85□□□□□ -1.31
GTF3A-207ENST00000482655 STOML1Q9UBI4 398 aa6.85□□□□□ -1.31
GTF3A-207ENST00000482655 RAXQ9Y2V3 346 aa6.85□□□□□ -1.31
GTF3A-207ENST00000482655 IVNS1ABPQ9Y6Y0 642 aa6.85□□□□□ -1.31
GTF3A-207ENST00000482655 GAS2O43903 313 aaKnown RBP6.84□□□□□ -1.31
GTF3A-207ENST00000482655 SPRED3Q2MJR0 410 aa6.84□□□□□ -1.31
GTF3A-207ENST00000482655 NUTM2GQ5VZR2 741 aa6.84□□□□□ -1.31
GTF3A-207ENST00000482655 FAM46AQ96IP4 442 aaKnown RBP6.84□□□□□ -1.31
GTF3A-207ENST00000482655 MYRFLQ96LU7 910 aa6.84□□□□□ -1.31
GTF3A-207ENST00000482655 TRAK1Q9UPV9 953 aa6.84□□□□□ -1.31
GTF3A-207ENST00000482655 LOC100289279A0A1B0GTE1 492 aa6.83□□□□□ -1.32
GTF3A-207ENST00000482655 PATL2C9JE40 543 aaKnown RBP6.83□□□□□ -1.32
GTF3A-207ENST00000482655 GSC2O15499 205 aa6.83□□□□□ -1.32
GTF3A-207ENST00000482655 IGHA2P01877 340 aa6.83□□□□□ -1.32
GTF3A-207ENST00000482655 FSTP19883 344 aa6.83□□□□□ -1.32
GTF3A-207ENST00000482655 HP1BP3Q5SSJ5 553 aaPredicted RBP6.83□□□□□ -1.32
GTF3A-207ENST00000482655 SLC51AQ86UW1 340 aa6.83□□□□□ -1.32
GTF3A-207ENST00000482655 CYP4F12Q9HCS2 524 aa6.83□□□□□ -1.32
GTF3A-207ENST00000482655 NLRP2Q9NX02 1062 aa6.83□□□□□ -1.32
GTF3A-207ENST00000482655 MEGF11A6BM72 1044 aa6.82□□□□□ -1.32
GTF3A-207ENST00000482655 CYP11A1P05108 521 aa6.82□□□□□ -1.32
GTF3A-207ENST00000482655 PREPP48147 710 aa6.82□□□□□ -1.32
GTF3A-207ENST00000482655 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.82□□□□□ -1.32
GTF3A-207ENST00000482655 ARMC10Q8N2F6 343 aa6.82□□□□□ -1.32
GTF3A-207ENST00000482655 C12orf50Q8NA57 414 aaPredicted RBP6.82□□□□□ -1.32
GTF3A-207ENST00000482655 KCNF1Q9H3M0 494 aa6.82□□□□□ -1.32
GTF3A-207ENST00000482655 ZFYVE1Q9HBF4 777 aa6.82□□□□□ -1.32
GTF3A-207ENST00000482655 HIF3AQ9Y2N7 669 aa6.82□□□□□ -1.32
GTF3A-207ENST00000482655 BMP3P12645 472 aa6.81□□□□□ -1.32
GTF3A-207ENST00000482655 ITPKAP23677 461 aa6.81□□□□□ -1.32
GTF3A-207ENST00000482655 PLCB3Q01970 1234 aa6.81□□□□□ -1.32
GTF3A-207ENST00000482655 ZNF423Q2M1K9 1284 aa6.81□□□□□ -1.32
GTF3A-207ENST00000482655 PRPF40BQ6NWY9 871 aaKnown RBP6.81□□□□□ -1.32
GTF3A-207ENST00000482655 ZSCAN29Q8IWY8 852 aaPredicted RBP6.81□□□□□ -1.32
GTF3A-207ENST00000482655 TRAIPQ9BWF2 469 aa6.81□□□□□ -1.32
GTF3A-207ENST00000482655 ZNF576Q9H609 170 aa6.81□□□□□ -1.32
GTF3A-207ENST00000482655 PPP4R2Q9NY27 417 aa6.81□□□□□ -1.32
GTF3A-207ENST00000482655 TMEM238LA0A1B0GVL6 79 aa6.8□□□□□ -1.32
GTF3A-207ENST00000482655 B3GALT4O96024 378 aa6.8□□□□□ -1.32
GTF3A-207ENST00000482655 PTPN12Q05209 780 aaKnown RBP6.8□□□□□ -1.32
GTF3A-207ENST00000482655 EXOSC6Q5RKV6 272 aaKnown RBP6.8□□□□□ -1.32
GTF3A-207ENST00000482655 FAM20CQ8IXL6 584 aa6.8□□□□□ -1.32
GTF3A-207ENST00000482655 EPS8L3Q8TE67 593 aaKnown RBP6.8□□□□□ -1.32
GTF3A-207ENST00000482655 CORO1BQ9BR76 489 aa6.8□□□□□ -1.32
GTF3A-207ENST00000482655 TMPRSS13Q9BYE2 586 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms