RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 GOLPH3LQ9H4A5 285 aa17.94■□□□□ 0.46
C9orf3-218ENST00000482056 A0A0G2JLW4 131 aa17.93■□□□□ 0.46
C9orf3-218ENST00000482056 NEMFO60524 1076 aa17.93■□□□□ 0.46
C9orf3-218ENST00000482056 ADORA1P30542 326 aa17.93■□□□□ 0.46
C9orf3-218ENST00000482056 GUCY1B3Q02153 619 aa17.93■□□□□ 0.46
C9orf3-218ENST00000482056 IQCB1Q15051 598 aa17.93■□□□□ 0.46
C9orf3-218ENST00000482056 BRAPQ7Z569 592 aa17.93■□□□□ 0.46
C9orf3-218ENST00000482056 CEP57L1Q8IYX8 460 aa17.93■□□□□ 0.46
C9orf3-218ENST00000482056 VSIG10Q8N0Z9 540 aa17.93■□□□□ 0.46
C9orf3-218ENST00000482056 C8orf76Q96K31 380 aa17.93■□□□□ 0.46
C9orf3-218ENST00000482056 CPLX1O14810 134 aa17.93■□□□□ 0.46
C9orf3-218ENST00000482056 STARD3NLO95772 234 aa17.93■□□□□ 0.46
C9orf3-218ENST00000482056 CSF1RP07333 972 aa17.93■□□□□ 0.46
C9orf3-218ENST00000482056 SNW1Q13573 536 aaKnown RBP17.93■□□□□ 0.46
C9orf3-218ENST00000482056 SF3A1Q15459 793 aaKnown RBP17.93■□□□□ 0.46
C9orf3-218ENST00000482056 ENGASEQ8NFI3 743 aa17.93■□□□□ 0.46
C9orf3-218ENST00000482056 KCNG4Q8TDN1 519 aa17.93■□□□□ 0.46
C9orf3-218ENST00000482056 MRFAP1L1Q96HT8 127 aa17.93■□□□□ 0.46
C9orf3-218ENST00000482056 FTOQ9C0B1 505 aaKnown RBP eCLIP17.93■□□□□ 0.46
C9orf3-218ENST00000482056 NWD2Q9ULI1 1742 aa17.93■□□□□ 0.46
C9orf3-218ENST00000482056 KLF18A0A0U1RQI7 1052 aa17.92■□□□□ 0.46
C9orf3-218ENST00000482056 A0A1W2PQ27 194 aa17.92■□□□□ 0.46
C9orf3-218ENST00000482056 A0A1W2PQ64 194 aa17.92■□□□□ 0.46
C9orf3-218ENST00000482056 A0A1W2PQD8 194 aa17.92■□□□□ 0.46
C9orf3-218ENST00000482056 GOLGA8BA8MQT2 603 aa17.92■□□□□ 0.46
C9orf3-218ENST00000482056 ZNF213O14771 459 aa17.92■□□□□ 0.46
C9orf3-218ENST00000482056 FGAP02671 866 aa17.92■□□□□ 0.46
C9orf3-218ENST00000482056 EVA1CP58658 441 aa17.92■□□□□ 0.46
C9orf3-218ENST00000482056 ZRSR1Q15695 479 aaKnown RBP17.92■□□□□ 0.46
C9orf3-218ENST00000482056 ATP2B3Q16720 1220 aa17.92■□□□□ 0.46
C9orf3-218ENST00000482056 ADALQ6DHV7 355 aa17.92■□□□□ 0.46
C9orf3-218ENST00000482056 MB21D2Q8IYB1 491 aaPredicted RBP17.92■□□□□ 0.46
C9orf3-218ENST00000482056 RGS22Q8NE09 1264 aa17.92■□□□□ 0.46
C9orf3-218ENST00000482056 CDHR2Q9BYE9 1310 aa17.92■□□□□ 0.46
C9orf3-218ENST00000482056 ZAP70P43403 619 aa17.91■□□□□ 0.46
C9orf3-218ENST00000482056 HAND2P61296 217 aa17.91■□□□□ 0.46
C9orf3-218ENST00000482056 TRDNQ13061 729 aa17.91■□□□□ 0.46
C9orf3-218ENST00000482056 STK38Q15208 465 aa17.91■□□□□ 0.46
C9orf3-218ENST00000482056 TTF1Q15361 905 aaPredicted RBP17.91■□□□□ 0.46
C9orf3-218ENST00000482056 HSP90AB3PQ58FF7 597 aa17.91■□□□□ 0.46
C9orf3-218ENST00000482056 METTL24Q5JXM2 366 aa17.91■□□□□ 0.46
C9orf3-218ENST00000482056 YEATS4O95619 227 aa17.91■□□□□ 0.46
C9orf3-218ENST00000482056 FDPSP14324 419 aaKnown RBP17.91■□□□□ 0.46
C9orf3-218ENST00000482056 C11orf57Q6ZUT1 292 aaPredicted RBP17.91■□□□□ 0.46
C9orf3-218ENST00000482056 ILDR1Q86SU0 546 aaPredicted RBP17.91■□□□□ 0.46
C9orf3-218ENST00000482056 FAM89AQ96GI7 184 aa17.91■□□□□ 0.46
C9orf3-218ENST00000482056 ORC3Q9UBD5 711 aaPredicted RBP17.91■□□□□ 0.46
C9orf3-218ENST00000482056 GPAA1O43292 621 aa17.9■□□□□ 0.46
C9orf3-218ENST00000482056 SDF4Q9BRK5 362 aa17.9■□□□□ 0.46
C9orf3-218ENST00000482056 POLR3EQ9NVU0 708 aa17.9■□□□□ 0.46
C9orf3-218ENST00000482056 NRBP1Q9UHY1 535 aa17.9■□□□□ 0.46
C9orf3-218ENST00000482056 PCDHA7Q9UN72 937 aa17.9■□□□□ 0.46
C9orf3-218ENST00000482056 SOS2Q07890 1332 aaPredicted RBP17.9■□□□□ 0.46
C9orf3-218ENST00000482056 SYNE3Q6ZMZ3 975 aa17.9■□□□□ 0.46
C9orf3-218ENST00000482056 FBXO18Q8NFZ0 1043 aa17.9■□□□□ 0.46
C9orf3-218ENST00000482056 ZNF512BQ96KM6 892 aaPredicted RBP17.9■□□□□ 0.46
C9orf3-218ENST00000482056 STRN4Q9NRL3 753 aa17.9■□□□□ 0.46
C9orf3-218ENST00000482056 DDX60Q8IY21 1712 aaKnown RBP17.89■□□□□ 0.46
C9orf3-218ENST00000482056 TOGARAM1Q9Y4F4 1720 aa17.89■□□□□ 0.46
C9orf3-218ENST00000482056 XIRP1Q702N8 1843 aaKnown RBP17.89■□□□□ 0.45
C9orf3-218ENST00000482056 MAP3K15Q6ZN16 1313 aa17.89■□□□□ 0.45
C9orf3-218ENST00000482056 LRMPQ12912 555 aa17.89■□□□□ 0.45
C9orf3-218ENST00000482056 GIGYF2Q6Y7W6 1299 aaKnown RBP17.89■□□□□ 0.45
C9orf3-218ENST00000482056 LDHAL6AQ6ZMR3 332 aa17.89■□□□□ 0.45
C9orf3-218ENST00000482056 FMR1NBQ8N0W7 255 aaPredicted RBP17.89■□□□□ 0.45
C9orf3-218ENST00000482056 CCDC85AQ96PX6 553 aaPredicted RBP17.89■□□□□ 0.45
C9orf3-218ENST00000482056 ABCA3Q99758 1704 aa17.89■□□□□ 0.45
C9orf3-218ENST00000482056 PUS7LQ9H0K6 701 aaKnown RBP17.89■□□□□ 0.45
C9orf3-218ENST00000482056 RIC1Q4ADV7 1423 aa17.88■□□□□ 0.45
C9orf3-218ENST00000482056 ANKRD18BA2A2Z9 1011 aa17.88■□□□□ 0.45
C9orf3-218ENST00000482056 FOXP2O15409 715 aa17.88■□□□□ 0.45
C9orf3-218ENST00000482056 SCARF1Q14162 830 aa17.88■□□□□ 0.45
C9orf3-218ENST00000482056 LINC00301Q8NCQ3 95 aa17.88■□□□□ 0.45
C9orf3-218ENST00000482056 RIOK3O14730 519 aaKnown RBP17.88■□□□□ 0.45
C9orf3-218ENST00000482056 PPFIA3O75145 1194 aa17.88■□□□□ 0.45
C9orf3-218ENST00000482056 CDKL5O76039 1030 aa17.88■□□□□ 0.45
C9orf3-218ENST00000482056 DNAJC10Q8IXB1 793 aa17.88■□□□□ 0.45
C9orf3-218ENST00000482056 GPHNQ9NQX3 736 aaPredicted RBP17.88■□□□□ 0.45
C9orf3-218ENST00000482056 CNNM1Q9NRU3 951 aa17.88■□□□□ 0.45
C9orf3-218ENST00000482056 HPS5Q9UPZ3 1129 aa17.88■□□□□ 0.45
C9orf3-218ENST00000482056 RIPOR2Q9Y4F9 1068 aa17.88■□□□□ 0.45
C9orf3-218ENST00000482056 ATRNO75882 1429 aa17.87■□□□□ 0.45
C9orf3-218ENST00000482056 SPTLC2O15270 562 aa17.87■□□□□ 0.45
C9orf3-218ENST00000482056 CPLX2Q6PUV4 134 aaKnown RBP17.87■□□□□ 0.45
C9orf3-218ENST00000482056 MYH3P11055 1940 aa17.87■□□□□ 0.45
C9orf3-218ENST00000482056 ITGA6P23229 1130 aa17.86■□□□□ 0.45
C9orf3-218ENST00000482056 ADD2P35612 726 aa17.86■□□□□ 0.45
C9orf3-218ENST00000482056 TPM4P67936 248 aa17.86■□□□□ 0.45
C9orf3-218ENST00000482056 TPD52L1Q16890 204 aaPredicted RBP17.86■□□□□ 0.45
C9orf3-218ENST00000482056 MYSM1Q5VVJ2 828 aa17.86■□□□□ 0.45
C9orf3-218ENST00000482056 LRRC8AQ8IWT6 810 aa17.86■□□□□ 0.45
C9orf3-218ENST00000482056 DHX40Q8IX18 779 aaKnown RBP17.86■□□□□ 0.45
C9orf3-218ENST00000482056 CACTINQ8WUQ7 758 aaKnown RBP17.86■□□□□ 0.45
C9orf3-218ENST00000482056 CCDC94Q9BW85 323 aaPredicted RBP17.86■□□□□ 0.45
C9orf3-218ENST00000482056 TBC1D2BQ9UPU7 963 aa17.86■□□□□ 0.45
C9orf3-218ENST00000482056 PAXBP1Q9Y5B6 917 aa17.86■□□□□ 0.45
C9orf3-218ENST00000482056 SMTNL1A8MU46 457 aa17.86■□□□□ 0.45
C9orf3-218ENST00000482056 POLR3DP05423 398 aaPredicted RBP17.86■□□□□ 0.45
C9orf3-218ENST00000482056 CTSWP56202 376 aa17.86■□□□□ 0.45
C9orf3-218ENST00000482056 ANTXR2P58335 489 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms