RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 KRT27Q7Z3Y8 459 aa23.51■■□□□ 1.35
CHKB-209ENST00000481673 LLPHQ9BRT6 129 aaKnown RBP23.51■■□□□ 1.35
CHKB-209ENST00000481673 CARMIL3Q8ND23 1372 aa23.51■■□□□ 1.35
CHKB-209ENST00000481673 SBF2Q86WG5 1849 aa23.51■■□□□ 1.35
CHKB-209ENST00000481673 ZMYM6O95789 1325 aa23.51■■□□□ 1.35
CHKB-209ENST00000481673 WDR19Q8NEZ3 1342 aa23.51■■□□□ 1.35
CHKB-209ENST00000481673 TCRBV5S4A2TA0A5A2 114 aa23.51■■□□□ 1.35
CHKB-209ENST00000481673 GOLGA6L3A6NEY3 463 aa23.51■■□□□ 1.35
CHKB-209ENST00000481673 MBD3O95983 291 aa23.51■■□□□ 1.35
CHKB-209ENST00000481673 BCAMP50895 628 aa23.51■■□□□ 1.35
CHKB-209ENST00000481673 ALX1Q15699 326 aa23.51■■□□□ 1.35
CHKB-209ENST00000481673 GTF3C6Q969F1 213 aa23.51■■□□□ 1.35
CHKB-209ENST00000481673 AIDAQ96BJ3 306 aa23.51■■□□□ 1.35
CHKB-209ENST00000481673 GZF1Q9H116 711 aaPredicted RBP23.51■■□□□ 1.35
CHKB-209ENST00000481673 C4BP0C0L5 1744 aa23.5■■□□□ 1.35
CHKB-209ENST00000481673 SEMA3EO15041 775 aa23.5■■□□□ 1.35
CHKB-209ENST00000481673 PRPF40AO75400 957 aaKnown RBP23.5■■□□□ 1.35
CHKB-209ENST00000481673 GNAT2P19087 354 aa23.5■■□□□ 1.35
CHKB-209ENST00000481673 NECAB1Q8N987 351 aa23.5■■□□□ 1.35
CHKB-209ENST00000481673 TCEANC2Q96MN5 208 aa23.5■■□□□ 1.35
CHKB-209ENST00000481673 COL24A1Q17RW2 1714 aa23.5■■□□□ 1.35
CHKB-209ENST00000481673 FOXP2O15409 715 aa23.49■■□□□ 1.35
CHKB-209ENST00000481673 ST3GAL1Q11201 340 aa23.49■■□□□ 1.35
CHKB-209ENST00000481673 C3orf67Q6ZVT6 689 aa23.49■■□□□ 1.35
CHKB-209ENST00000481673 F13A1P00488 732 aa23.49■■□□□ 1.35
CHKB-209ENST00000481673 CSPP1Q1MSJ5 1256 aa23.49■■□□□ 1.35
CHKB-209ENST00000481673 LARP1BQ659C4 914 aaKnown RBP23.49■■□□□ 1.35
CHKB-209ENST00000481673 TMED8Q6PL24 325 aaPredicted RBP23.49■■□□□ 1.35
CHKB-209ENST00000481673 BRF1Q92994 677 aa23.49■■□□□ 1.35
CHKB-209ENST00000481673 ZNF274Q96GC6 653 aaPredicted RBP23.49■■□□□ 1.35
CHKB-209ENST00000481673 FSD2A1L4K1 749 aa23.48■■□□□ 1.35
CHKB-209ENST00000481673 NPHP1O15259 732 aa23.48■■□□□ 1.35
CHKB-209ENST00000481673 PFKFB2O60825 505 aa23.48■■□□□ 1.35
CHKB-209ENST00000481673 MCM5P33992 734 aa23.48■■□□□ 1.35
CHKB-209ENST00000481673 NCOA7Q8NI08 942 aa23.48■■□□□ 1.35
CHKB-209ENST00000481673 STRBPQ96SI9 672 aaKnown RBP23.48■■□□□ 1.35
CHKB-209ENST00000481673 KIF3AQ9Y496 699 aa23.48■■□□□ 1.35
CHKB-209ENST00000481673 TAF1LQ8IZX4 1826 aa23.48■■□□□ 1.35
CHKB-209ENST00000481673 IGSF3O75054 1194 aa23.47■■□□□ 1.35
CHKB-209ENST00000481673 NCLP19338 710 aaKnown RBP23.47■■□□□ 1.35
CHKB-209ENST00000481673 EVCP57679 992 aa23.47■■□□□ 1.35
CHKB-209ENST00000481673 TRDNQ13061 729 aa23.47■■□□□ 1.35
CHKB-209ENST00000481673 FOXD4L5Q5VV16 416 aaPredicted RBP23.47■■□□□ 1.35
CHKB-209ENST00000481673 FOXD4L4Q8WXT5 416 aaPredicted RBP23.47■■□□□ 1.35
CHKB-209ENST00000481673 CELF1Q92879 486 aaKnown RBP23.47■■□□□ 1.35
CHKB-209ENST00000481673 LRRC4BQ9NT99 713 aa23.47■■□□□ 1.35
CHKB-209ENST00000481673 DENND2AQ9ULE3 1009 aa23.47■■□□□ 1.35
CHKB-209ENST00000481673 PATL2C9JE40 543 aaKnown RBP23.47■■□□□ 1.35
CHKB-209ENST00000481673 COL9A3Q14050 684 aaPredicted RBP23.47■■□□□ 1.35
CHKB-209ENST00000481673 TTLL5Q6EMB2 1281 aa23.47■■□□□ 1.35
CHKB-209ENST00000481673 VPS37DQ86XT2 251 aa23.47■■□□□ 1.35
CHKB-209ENST00000481673 TMEM87AQ8NBN3 555 aa23.47■■□□□ 1.35
CHKB-209ENST00000481673 WWC3Q9ULE0 1092 aa23.47■■□□□ 1.35
CHKB-209ENST00000481673 MTMR6Q9Y217 621 aa23.47■■□□□ 1.35
CHKB-209ENST00000481673 PDS5AQ29RF7 1337 aaKnown RBP23.46■■□□□ 1.35
CHKB-209ENST00000481673 MYH7P12883 1935 aa23.46■■□□□ 1.35
CHKB-209ENST00000481673 SNAP23O00161 211 aa23.46■■□□□ 1.35
CHKB-209ENST00000481673 RALYLQ86SE5 291 aaKnown RBP23.46■■□□□ 1.35
CHKB-209ENST00000481673 MAGEB6Q8N7X4 407 aa23.46■■□□□ 1.35
CHKB-209ENST00000481673 LRP2BPQ9P2M1 347 aa23.46■■□□□ 1.35
CHKB-209ENST00000481673 SMIM5Q71RC9 77 aa23.45■■□□□ 1.35
CHKB-209ENST00000481673 PNPLA7Q6ZV29 1317 aa23.45■■□□□ 1.34
CHKB-209ENST00000481673 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.45■■□□□ 1.34
CHKB-209ENST00000481673 APPP05067 770 aa23.45■■□□□ 1.34
CHKB-209ENST00000481673 HMGN5P82970 282 aaKnown RBP23.45■■□□□ 1.34
CHKB-209ENST00000481673 ZNF772Q68DY9 489 aaPredicted RBP23.45■■□□□ 1.34
CHKB-209ENST00000481673 PHF14O94880 888 aa23.44■■□□□ 1.34
CHKB-209ENST00000481673 NFIXQ14938 502 aa23.44■■□□□ 1.34
CHKB-209ENST00000481673 AMIGO3Q86WK7 504 aa23.44■■□□□ 1.34
CHKB-209ENST00000481673 CNBD1Q8NA66 436 aa23.44■■□□□ 1.34
CHKB-209ENST00000481673 NACAP1Q9BZK3 213 aa23.44■■□□□ 1.34
CHKB-209ENST00000481673 TM4SF1P30408 202 aa23.43■■□□□ 1.34
CHKB-209ENST00000481673 MRE11P49959 708 aa23.43■■□□□ 1.34
CHKB-209ENST00000481673 FBXO33Q7Z6M2 555 aa23.43■■□□□ 1.34
CHKB-209ENST00000481673 STK3Q13188 491 aa23.43■■□□□ 1.34
CHKB-209ENST00000481673 MB21D2Q8IYB1 491 aaPredicted RBP23.43■■□□□ 1.34
CHKB-209ENST00000481673 FAM84BQ96KN1 310 aaPredicted RBP23.43■■□□□ 1.34
CHKB-209ENST00000481673 DHX16O60231 1041 aaKnown RBP23.42■■□□□ 1.34
CHKB-209ENST00000481673 SMARCC2Q8TAQ2 1214 aa23.42■■□□□ 1.34
CHKB-209ENST00000481673 RBM6P78332 1123 aaKnown RBP23.41■■□□□ 1.34
CHKB-209ENST00000481673 GYG1P46976 350 aa23.41■■□□□ 1.34
CHKB-209ENST00000481673 HAND2P61296 217 aa23.41■■□□□ 1.34
CHKB-209ENST00000481673 SYAP1Q96A49 352 aaPredicted RBP23.41■■□□□ 1.34
CHKB-209ENST00000481673 VPS37CA5D8V6 355 aaPredicted RBP23.4■■□□□ 1.34
CHKB-209ENST00000481673 PRC1O43663 620 aa23.4■■□□□ 1.34
CHKB-209ENST00000481673 MBD4O95243 580 aa23.4■■□□□ 1.34
CHKB-209ENST00000481673 SCRN1Q12765 414 aa23.4■■□□□ 1.34
CHKB-209ENST00000481673 GRAPQ13588 217 aa23.4■■□□□ 1.34
CHKB-209ENST00000481673 IFNL3Q8IZI9 196 aa23.4■■□□□ 1.34
CHKB-209ENST00000481673 GRAPLQ8TC17 118 aaPredicted RBP23.4■■□□□ 1.34
CHKB-209ENST00000481673 LRRC2Q9BYS8 371 aa23.4■■□□□ 1.34
CHKB-209ENST00000481673 NAPBQ9H115 298 aa23.4■■□□□ 1.34
CHKB-209ENST00000481673 CNNM2Q9H8M5 875 aa23.4■■□□□ 1.34
CHKB-209ENST00000481673 DOCK2Q92608 1830 aa23.39■■□□□ 1.34
CHKB-209ENST00000481673 PDIA3P30101 505 aaKnown RBP23.39■■□□□ 1.34
CHKB-209ENST00000481673 HIBADHP31937 336 aaKnown RBP23.39■■□□□ 1.34
CHKB-209ENST00000481673 ZNF445P59923 1031 aa23.39■■□□□ 1.34
CHKB-209ENST00000481673 APOBRQ0VD83 1088 aa23.39■■□□□ 1.34
CHKB-209ENST00000481673 KLHL34Q8N239 644 aa23.39■■□□□ 1.34
CHKB-209ENST00000481673 FAM184AQ8NB25 1140 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms