RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 AKR1B10O60218 316 aa13.06□□□□□ -0.32
TRIM27-205ENST00000481474 CCDC172P0C7W6 258 aa13.06□□□□□ -0.32
TRIM27-205ENST00000481474 BRD3Q15059 726 aa13.06□□□□□ -0.32
TRIM27-205ENST00000481474 NAA15Q9BXJ9 866 aaKnown RBP13.06□□□□□ -0.32
TRIM27-205ENST00000481474 RAB3GAP2Q9H2M9 1393 aa13.06□□□□□ -0.32
TRIM27-205ENST00000481474 UBN1Q9NPG3 1134 aa13.06□□□□□ -0.32
TRIM27-205ENST00000481474 WDR33Q9C0J8 1336 aaKnown RBP13.06□□□□□ -0.32
TRIM27-205ENST00000481474 GNPATO15228 680 aa13.06□□□□□ -0.32
TRIM27-205ENST00000481474 OPA1O60313 960 aa13.06□□□□□ -0.32
TRIM27-205ENST00000481474 SFPQP23246 707 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRIM27-205ENST00000481474 ASIC1P78348 528 aa13.06□□□□□ -0.32
TRIM27-205ENST00000481474 GSTO1P78417 241 aa13.06□□□□□ -0.32
TRIM27-205ENST00000481474 RAD51AP2Q09MP3 1159 aa13.06□□□□□ -0.32
TRIM27-205ENST00000481474 CCDC152Q4G0S7 254 aa13.06□□□□□ -0.32
TRIM27-205ENST00000481474 LRFN2Q9ULH4 789 aa13.06□□□□□ -0.32
TRIM27-205ENST00000481474 STX10O60499 249 aa13.05□□□□□ -0.32
TRIM27-205ENST00000481474 FSIP1Q8NA03 581 aa13.05□□□□□ -0.32
TRIM27-205ENST00000481474 RNF41Q9H4P4 317 aaPredicted RBP13.05□□□□□ -0.32
TRIM27-205ENST00000481474 PHLDB1Q86UU1 1377 aa13.05□□□□□ -0.32
TRIM27-205ENST00000481474 HMGB2P26583 209 aaKnown RBP13.05□□□□□ -0.32
TRIM27-205ENST00000481474 METAP2P50579 478 aaKnown RBP eCLIP13.05□□□□□ -0.322e-8■■■■□ 24.8
TRIM27-205ENST00000481474 ZNF804AQ7Z570 1209 aa13.05□□□□□ -0.32
TRIM27-205ENST00000481474 MTERF4Q7Z6M4 381 aaKnown RBP13.05□□□□□ -0.32
TRIM27-205ENST00000481474 CEP120Q8N960 986 aa13.05□□□□□ -0.32
TRIM27-205ENST00000481474 LEO1Q8WVC0 666 aaPredicted RBP13.05□□□□□ -0.32
TRIM27-205ENST00000481474 ZKSCAN3Q9BRR0 538 aa13.05□□□□□ -0.32
TRIM27-205ENST00000481474 NUCKS1Q9H1E3 243 aaKnown RBP13.05□□□□□ -0.32
TRIM27-205ENST00000481474 GDPD2Q9HCC8 539 aa13.05□□□□□ -0.32
TRIM27-205ENST00000481474 OCM2P0CE71 109 aa13.05□□□□□ -0.32
TRIM27-205ENST00000481474 OCMP0CE72 109 aaPredicted RBP13.05□□□□□ -0.32
TRIM27-205ENST00000481474 CKAP4Q07065 602 aaKnown RBP13.05□□□□□ -0.32
TRIM27-205ENST00000481474 UTP14CQ5TAP6 766 aaKnown RBP13.05□□□□□ -0.32
TRIM27-205ENST00000481474 USP37Q86T82 979 aa13.05□□□□□ -0.32
TRIM27-205ENST00000481474 MAP3K2Q9Y2U5 619 aa13.05□□□□□ -0.32
TRIM27-205ENST00000481474 CD2APQ9Y5K6 639 aa13.05□□□□□ -0.32
TRIM27-205ENST00000481474 NR1I2O75469 434 aa13.05□□□□□ -0.32
TRIM27-205ENST00000481474 MARCKSP29966 332 aaPredicted RBP13.05□□□□□ -0.32
TRIM27-205ENST00000481474 CDCA7LQ96GN5 454 aa13.05□□□□□ -0.32
TRIM27-205ENST00000481474 ADAMTS8Q9UP79 889 aa13.05□□□□□ -0.32
TRIM27-205ENST00000481474 TBCCQ15814 346 aa13.05□□□□□ -0.32
TRIM27-205ENST00000481474 UBE3BQ7Z3V4 1068 aa13.05□□□□□ -0.32
TRIM27-205ENST00000481474 TTC12Q9H892 705 aaPredicted RBP13.05□□□□□ -0.32
TRIM27-205ENST00000481474 ST7Q9NRC1 585 aa13.05□□□□□ -0.32
TRIM27-205ENST00000481474 MCM9Q9NXL9 1143 aa13.05□□□□□ -0.32
TRIM27-205ENST00000481474 RXRAP19793 462 aa13.04□□□□□ -0.32
TRIM27-205ENST00000481474 NOP14P78316 857 aaKnown RBP13.04□□□□□ -0.32
TRIM27-205ENST00000481474 ITIH3Q06033 890 aa13.04□□□□□ -0.32
TRIM27-205ENST00000481474 MAP3K11Q16584 847 aa13.04□□□□□ -0.32
TRIM27-205ENST00000481474 KIAA1841Q6NSI8 718 aa13.04□□□□□ -0.32
TRIM27-205ENST00000481474 KIAA1524Q8TCG1 905 aa13.04□□□□□ -0.32
TRIM27-205ENST00000481474 IFT81Q8WYA0 676 aa13.04□□□□□ -0.32
TRIM27-205ENST00000481474 HSF2BPO75031 334 aa13.04□□□□□ -0.32
TRIM27-205ENST00000481474 NAA16Q6N069 864 aaPredicted RBP13.04□□□□□ -0.32
TRIM27-205ENST00000481474 CLIP2Q9UDT6 1046 aa13.04□□□□□ -0.32
TRIM27-205ENST00000481474 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRIM27-205ENST00000481474 V9GYY5 206 aaPredicted RBP13.04□□□□□ -0.32
TRIM27-205ENST00000481474 RRBP1Q9P2E9 1410 aaKnown RBP13.04□□□□□ -0.32
TRIM27-205ENST00000481474 PRR16Q569H4 304 aa13.04□□□□□ -0.32
TRIM27-205ENST00000481474 FAM114A1Q8IWE2 563 aa13.04□□□□□ -0.32
TRIM27-205ENST00000481474 SMARCA2P51531 1590 aa13.04□□□□□ -0.32
TRIM27-205ENST00000481474 RNASELQ05823 741 aaKnown RBP13.04□□□□□ -0.32
TRIM27-205ENST00000481474 MYSM1Q5VVJ2 828 aa13.04□□□□□ -0.32
TRIM27-205ENST00000481474 FTOQ9C0B1 505 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRIM27-205ENST00000481474 ZBBXA8MT70 800 aa13.03□□□□□ -0.32
TRIM27-205ENST00000481474 PRPF6O94906 941 aaKnown RBP13.03□□□□□ -0.32
TRIM27-205ENST00000481474 IARSP41252 1262 aaKnown RBP13.03□□□□□ -0.32
TRIM27-205ENST00000481474 PTPN14Q15678 1187 aa13.03□□□□□ -0.32
TRIM27-205ENST00000481474 DUSP27Q5VZP5 1158 aa13.03□□□□□ -0.32
TRIM27-205ENST00000481474 NSMFQ6X4W1 530 aa13.03□□□□□ -0.32
TRIM27-205ENST00000481474 PTPRGP23470 1445 aa13.03□□□□□ -0.32
TRIM27-205ENST00000481474 KARSQ15046 597 aaKnown RBP13.03□□□□□ -0.32
TRIM27-205ENST00000481474 ZBTB41Q5SVQ8 909 aa13.03□□□□□ -0.32
TRIM27-205ENST00000481474 SCYL2Q6P3W7 929 aa13.03□□□□□ -0.32
TRIM27-205ENST00000481474 SDCCAG8Q86SQ7 713 aaPredicted RBP13.03□□□□□ -0.32
TRIM27-205ENST00000481474 SMARCC1Q92922 1105 aaPredicted RBP13.03□□□□□ -0.32
TRIM27-205ENST00000481474 NR1H4Q96RI1 486 aaPredicted RBP13.03□□□□□ -0.32
TRIM27-205ENST00000481474 MMS19Q96T76 1030 aa13.03□□□□□ -0.32
TRIM27-205ENST00000481474 FAM114A2Q9NRY5 505 aa13.03□□□□□ -0.32
TRIM27-205ENST00000481474 STRN3Q13033 797 aa13.03□□□□□ -0.32
TRIM27-205ENST00000481474 NXNQ6DKJ4 435 aa13.03□□□□□ -0.32
TRIM27-205ENST00000481474 RBBP5Q15291 538 aaKnown RBP13.03□□□□□ -0.32
TRIM27-205ENST00000481474 WDR44Q5JSH3 913 aa13.03□□□□□ -0.32
TRIM27-205ENST00000481474 NFKBIL1Q9UBC1 381 aaPredicted RBP13.03□□□□□ -0.32
TRIM27-205ENST00000481474 USP47Q96K76 1375 aa13.03□□□□□ -0.32
TRIM27-205ENST00000481474 SPECC1L-ADORA2AF8WAN1 911 aa13.03□□□□□ -0.32
TRIM27-205ENST00000481474 PDE3AQ14432 1141 aa13.03□□□□□ -0.32
TRIM27-205ENST00000481474 N4BP3O15049 544 aa13.02□□□□□ -0.32
TRIM27-205ENST00000481474 MBD3O95983 291 aa13.02□□□□□ -0.32
TRIM27-205ENST00000481474 INPP1P49441 399 aa13.02□□□□□ -0.32
TRIM27-205ENST00000481474 HSPA2P54652 639 aa13.02□□□□□ -0.32
TRIM27-205ENST00000481474 LRRC23Q53EV4 343 aaPredicted RBP13.02□□□□□ -0.32
TRIM27-205ENST00000481474 CEP57Q86XR8 500 aa13.02□□□□□ -0.32
TRIM27-205ENST00000481474 ANLNQ9NQW6 1124 aa13.02□□□□□ -0.32
TRIM27-205ENST00000481474 TRPC6Q9Y210 931 aa13.02□□□□□ -0.32
TRIM27-205ENST00000481474 BICDL2A1A5D9 508 aa13.02□□□□□ -0.32
TRIM27-205ENST00000481474 CALML3P27482 149 aa13.02□□□□□ -0.32
TRIM27-205ENST00000481474 DDB1Q16531 1140 aa13.02□□□□□ -0.32
TRIM27-205ENST00000481474 MSANTD4Q8NCY6 345 aa13.02□□□□□ -0.32
TRIM27-205ENST00000481474 IFT74Q96LB3 600 aa13.02□□□□□ -0.32
TRIM27-205ENST00000481474 SAMSN1Q9NSI8 373 aaKnown RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms