RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 RTCBQ9Y3I0 505 aaKnown RBP21.84■■□□□ 1.09
MRPL28-209ENST00000481453 CHRNDQ07001 517 aa21.83■■□□□ 1.09
MRPL28-209ENST00000481453 ANKRD1Q15327 319 aa21.83■■□□□ 1.09
MRPL28-209ENST00000481453 WASHC4Q2M389 1173 aa21.83■■□□□ 1.09
MRPL28-209ENST00000481453 HS1BP3Q53T59 392 aa21.83■■□□□ 1.09
MRPL28-209ENST00000481453 ARHGEF1Q92888 912 aaKnown RBP21.83■■□□□ 1.09
MRPL28-209ENST00000481453 ADD2P35612 726 aa21.83■■□□□ 1.08
MRPL28-209ENST00000481453 USP48Q86UV5 1035 aa21.83■■□□□ 1.08
MRPL28-209ENST00000481453 NECAB1Q8N987 351 aa21.83■■□□□ 1.08
MRPL28-209ENST00000481453 CDC5LQ99459 802 aaKnown RBP21.83■■□□□ 1.08
MRPL28-209ENST00000481453 DOCK2Q92608 1830 aa21.83■■□□□ 1.08
MRPL28-209ENST00000481453 TTF1Q15361 905 aaPredicted RBP21.82■■□□□ 1.08
MRPL28-209ENST00000481453 ZPR1O75312 459 aa21.82■■□□□ 1.08
MRPL28-209ENST00000481453 AEBP2Q6ZN18 517 aaPredicted RBP21.82■■□□□ 1.08
MRPL28-209ENST00000481453 BCL11BQ9C0K0 894 aaPredicted RBP21.82■■□□□ 1.08
MRPL28-209ENST00000481453 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.82■■□□□ 1.08
MRPL28-209ENST00000481453 QTRT2Q9H974 415 aaKnown RBP21.82■■□□□ 1.08
MRPL28-209ENST00000481453 SMC3Q9UQE7 1217 aa21.82■■□□□ 1.08
MRPL28-209ENST00000481453 GADD45BO75293 160 aaPredicted RBP21.81■■□□□ 1.08
MRPL28-209ENST00000481453 RASGRF1Q13972 1273 aa21.81■■□□□ 1.08
MRPL28-209ENST00000481453 TTLL5Q6EMB2 1281 aa21.81■■□□□ 1.08
MRPL28-209ENST00000481453 LRRC4BQ9NT99 713 aa21.81■■□□□ 1.08
MRPL28-209ENST00000481453 DTNBO60941 627 aa21.8■■□□□ 1.08
MRPL28-209ENST00000481453 SETDB2Q96T68 719 aa21.8■■□□□ 1.08
MRPL28-209ENST00000481453 SPATA5Q8NB90 893 aa21.8■■□□□ 1.08
MRPL28-209ENST00000481453 NYXQ9GZU5 481 aa21.8■■□□□ 1.08
MRPL28-209ENST00000481453 TSPY26PQ9H489 355 aa21.8■■□□□ 1.08
MRPL28-209ENST00000481453 BRWD3Q6RI45 1802 aa21.79■■□□□ 1.08
MRPL28-209ENST00000481453 GPAA1O43292 621 aa21.79■■□□□ 1.08
MRPL28-209ENST00000481453 GJB2P29033 226 aa21.79■■□□□ 1.08
MRPL28-209ENST00000481453 SLC9C2Q5TAH2 1124 aa21.79■■□□□ 1.08
MRPL28-209ENST00000481453 ANKRD18AQ8IVF6 992 aa21.79■■□□□ 1.08
MRPL28-209ENST00000481453 RNF214Q8ND24 703 aa21.79■■□□□ 1.08
MRPL28-209ENST00000481453 WWC3Q9ULE0 1092 aa21.79■■□□□ 1.08
MRPL28-209ENST00000481453 TCRBV5S4A2TA0A5A2 114 aa21.79■■□□□ 1.08
MRPL28-209ENST00000481453 E7EWF7 191 aa21.79■■□□□ 1.08
MRPL28-209ENST00000481453 PHF14O94880 888 aa21.79■■□□□ 1.08
MRPL28-209ENST00000481453 ZSCAN22P10073 491 aaPredicted RBP21.79■■□□□ 1.08
MRPL28-209ENST00000481453 SYT1P21579 422 aa21.79■■□□□ 1.08
MRPL28-209ENST00000481453 UBE3CQ15386 1083 aa21.79■■□□□ 1.08
MRPL28-209ENST00000481453 ZSCAN25Q6NSZ9 544 aa21.79■■□□□ 1.08
MRPL28-209ENST00000481453 STX6O43752 255 aa21.78■■□□□ 1.08
MRPL28-209ENST00000481453 IDH1O75874 414 aaKnown RBP21.78■■□□□ 1.08
MRPL28-209ENST00000481453 PDE6AP16499 860 aa21.78■■□□□ 1.08
MRPL28-209ENST00000481453 BCAMP50895 628 aa21.78■■□□□ 1.08
MRPL28-209ENST00000481453 Q6ZUG5 572 aa21.78■■□□□ 1.08
MRPL28-209ENST00000481453 NBPF5PQ86XG9 351 aaPredicted RBP21.78■■□□□ 1.08
MRPL28-209ENST00000481453 BSDC1Q9NW68 430 aaPredicted RBP21.78■■□□□ 1.08
MRPL28-209ENST00000481453 EXOSC10Q01780 885 aaKnown RBP21.78■■□□□ 1.08
MRPL28-209ENST00000481453 FAM196AQ6ZSG2 479 aa21.78■■□□□ 1.08
MRPL28-209ENST00000481453 CELF1Q92879 486 aaKnown RBP21.78■■□□□ 1.08
MRPL28-209ENST00000481453 TNRC6CQ9HCJ0 1690 aaKnown RBP21.77■■□□□ 1.08
MRPL28-209ENST00000481453 ZNF532Q9HCE3 1301 aa21.77■■□□□ 1.08
MRPL28-209ENST00000481453 HMGB1P09429 215 aaKnown RBP21.77■■□□□ 1.08
MRPL28-209ENST00000481453 GTF2E1P29083 439 aaPredicted RBP21.77■■□□□ 1.08
MRPL28-209ENST00000481453 DHX32Q7L7V1 743 aaKnown RBP21.77■■□□□ 1.08
MRPL28-209ENST00000481453 NOL7Q9UMY1 257 aaKnown RBP21.77■■□□□ 1.08
MRPL28-209ENST00000481453 WTIPA6NIX2 430 aaPredicted RBP21.76■■□□□ 1.07
MRPL28-209ENST00000481453 FGAP02671 866 aa21.76■■□□□ 1.07
MRPL28-209ENST00000481453 TMEM87AQ8NBN3 555 aa21.76■■□□□ 1.07
MRPL28-209ENST00000481453 CNPY2Q9Y2B0 182 aa21.76■■□□□ 1.07
MRPL28-209ENST00000481453 UBR3Q6ZT12 1888 aa21.76■■□□□ 1.07
MRPL28-209ENST00000481453 LRRC2Q9BYS8 371 aa21.76■■□□□ 1.07
MRPL28-209ENST00000481453 AGXT2Q9BYV1 514 aa21.75■■□□□ 1.07
MRPL28-209ENST00000481453 CTNNA3Q9UI47 895 aa21.75■■□□□ 1.07
MRPL28-209ENST00000481453 MINPP1Q9UNW1 487 aa21.75■■□□□ 1.07
MRPL28-209ENST00000481453 ZNF804BA4D1E1 1349 aa21.75■■□□□ 1.07
MRPL28-209ENST00000481453 TRAPPC3LQ5T215 181 aa21.75■■□□□ 1.07
MRPL28-209ENST00000481453 CCDC24Q8N4L8 307 aa21.75■■□□□ 1.07
MRPL28-209ENST00000481453 TPTE2Q6XPS3 522 aa21.74■■□□□ 1.07
MRPL28-209ENST00000481453 ATP6V1DQ9Y5K8 247 aa21.74■■□□□ 1.07
MRPL28-209ENST00000481453 F13A1P00488 732 aa21.74■■□□□ 1.07
MRPL28-209ENST00000481453 RFC4P35249 363 aa21.74■■□□□ 1.07
MRPL28-209ENST00000481453 STK3Q13188 491 aa21.74■■□□□ 1.07
MRPL28-209ENST00000481453 BRF1Q92994 677 aa21.74■■□□□ 1.07
MRPL28-209ENST00000481453 GTF3C6Q969F1 213 aa21.74■■□□□ 1.07
MRPL28-209ENST00000481453 NLRP3Q96P20 1036 aa21.74■■□□□ 1.07
MRPL28-209ENST00000481453 MTMR6Q9Y217 621 aa21.74■■□□□ 1.07
MRPL28-209ENST00000481453 HAND2P61296 217 aa21.73■■□□□ 1.07
MRPL28-209ENST00000481453 COL1A1P02452 1464 aaPredicted RBP21.73■■□□□ 1.07
MRPL28-209ENST00000481453 UBE4AQ14139 1066 aa21.72■■□□□ 1.07
MRPL28-209ENST00000481453 IMMTQ16891 758 aaKnown RBP21.72■■□□□ 1.07
MRPL28-209ENST00000481453 OFD1O75665 1012 aa21.72■■□□□ 1.07
MRPL28-209ENST00000481453 TM4SF1P30408 202 aa21.72■■□□□ 1.07
MRPL28-209ENST00000481453 CCDC39Q9UFE4 941 aa21.72■■□□□ 1.07
MRPL28-209ENST00000481453 UBE2HP62256 183 aa21.71■■□□□ 1.07
MRPL28-209ENST00000481453 NFIXQ14938 502 aa21.71■■□□□ 1.07
MRPL28-209ENST00000481453 CCDC183Q5T5S1 534 aa21.71■■□□□ 1.07
MRPL28-209ENST00000481453 KRT27Q7Z3Y8 459 aa21.71■■□□□ 1.07
MRPL28-209ENST00000481453 MAGEB6Q8N7X4 407 aa21.71■■□□□ 1.07
MRPL28-209ENST00000481453 NBPF3Q9H094 633 aa21.71■■□□□ 1.07
MRPL28-209ENST00000481453 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.71■■□□□ 1.07
MRPL28-209ENST00000481453 GYG1P46976 350 aa21.71■■□□□ 1.07
MRPL28-209ENST00000481453 RPS8P62241 208 aaKnown RBP21.71■■□□□ 1.07
MRPL28-209ENST00000481453 MAP3K12Q12852 859 aa21.71■■□□□ 1.07
MRPL28-209ENST00000481453 TPRNQ4KMQ1 711 aa21.71■■□□□ 1.07
MRPL28-209ENST00000481453 STRBPQ96SI9 672 aaKnown RBP21.71■■□□□ 1.07
MRPL28-209ENST00000481453 TCHHQ07283 1943 aa21.71■■□□□ 1.07
MRPL28-209ENST00000481453 CARMIL3Q8ND23 1372 aa21.71■■□□□ 1.07
MRPL28-209ENST00000481453 ADRA2BP18089 450 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms