RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 NECAB1Q8N987 351 aa19.88■□□□□ 0.77
SH3D21-203ENST00000480549 HELBQ8NG08 1087 aaPredicted RBP19.88■□□□□ 0.77
SH3D21-203ENST00000480549 DDX49Q9Y6V7 483 aaKnown RBP19.88■□□□□ 0.77
SH3D21-203ENST00000480549 FOXP2O15409 715 aa19.88■□□□□ 0.77
SH3D21-203ENST00000480549 ARID4AP29374 1257 aaPredicted RBP19.88■□□□□ 0.77
SH3D21-203ENST00000480549 CCDC102BQ68D86 513 aa19.88■□□□□ 0.77
SH3D21-203ENST00000480549 LPIN2Q92539 896 aa19.88■□□□□ 0.77
SH3D21-203ENST00000480549 COL24A1Q17RW2 1714 aa19.87■□□□□ 0.77
SH3D21-203ENST00000480549 DOCK2Q92608 1830 aa19.87■□□□□ 0.77
SH3D21-203ENST00000480549 SPDYE4A6NLX3 237 aa19.87■□□□□ 0.77
SH3D21-203ENST00000480549 PHKA1P46020 1223 aa19.87■□□□□ 0.77
SH3D21-203ENST00000480549 A0A0G2JLW4 131 aa19.87■□□□□ 0.77
SH3D21-203ENST00000480549 PRPF40AO75400 957 aaKnown RBP19.87■□□□□ 0.77
SH3D21-203ENST00000480549 SYT1P21579 422 aa19.87■□□□□ 0.77
SH3D21-203ENST00000480549 FAM182BQ5T319 152 aa19.87■□□□□ 0.77
SH3D21-203ENST00000480549 TCHHQ07283 1943 aa19.87■□□□□ 0.77
SH3D21-203ENST00000480549 GJB2P29033 226 aa19.87■□□□□ 0.77
SH3D21-203ENST00000480549 HSP90B1P14625 803 aaKnown RBP19.86■□□□□ 0.77
SH3D21-203ENST00000480549 RC3H1Q5TC82 1133 aaKnown RBP19.86■□□□□ 0.77
SH3D21-203ENST00000480549 SMIM5Q71RC9 77 aa19.86■□□□□ 0.77
SH3D21-203ENST00000480549 APPBP2Q92624 585 aa19.86■□□□□ 0.77
SH3D21-203ENST00000480549 BCL2L12Q9HB09 334 aa19.86■□□□□ 0.77
SH3D21-203ENST00000480549 RGL2O15211 777 aa19.86■□□□□ 0.77
SH3D21-203ENST00000480549 MPHOSPH8Q99549 860 aa19.86■□□□□ 0.77
SH3D21-203ENST00000480549 TAF1P21675 1872 aa19.86■□□□□ 0.77
SH3D21-203ENST00000480549 STX6O43752 255 aa19.85■□□□□ 0.77
SH3D21-203ENST00000480549 DTNBO60941 627 aa19.85■□□□□ 0.77
SH3D21-203ENST00000480549 GJD4Q96KN9 370 aaPredicted RBP19.85■□□□□ 0.77
SH3D21-203ENST00000480549 ZKSCAN5Q9Y2L8 839 aa19.85■□□□□ 0.77
SH3D21-203ENST00000480549 PUS7LQ9H0K6 701 aaKnown RBP19.85■□□□□ 0.77
SH3D21-203ENST00000480549 ATRNO75882 1429 aa19.85■□□□□ 0.77
SH3D21-203ENST00000480549 ZSCAN22P10073 491 aaPredicted RBP19.85■□□□□ 0.77
SH3D21-203ENST00000480549 WASHC4Q2M389 1173 aa19.85■□□□□ 0.77
SH3D21-203ENST00000480549 ERFEQ4G0M1 354 aa19.85■□□□□ 0.77
SH3D21-203ENST00000480549 GPT2Q8TD30 523 aa19.85■□□□□ 0.77
SH3D21-203ENST00000480549 PIH1D3Q9NQM4 214 aaKnown RBP19.85■□□□□ 0.77
SH3D21-203ENST00000480549 SNAP23O00161 211 aa19.84■□□□□ 0.77
SH3D21-203ENST00000480549 HS1BP3Q53T59 392 aa19.84■□□□□ 0.77
SH3D21-203ENST00000480549 CERKQ8TCT0 537 aa19.84■□□□□ 0.77
SH3D21-203ENST00000480549 UQCRFS1P1P0C7P4 283 aa19.84■□□□□ 0.77
SH3D21-203ENST00000480549 RPS6KA4O75676 772 aa19.83■□□□□ 0.77
SH3D21-203ENST00000480549 ADD2P35612 726 aa19.83■□□□□ 0.77
SH3D21-203ENST00000480549 Q6ZUG5 572 aa19.83■□□□□ 0.77
SH3D21-203ENST00000480549 C3orf67Q6ZVT6 689 aa19.83■□□□□ 0.77
SH3D21-203ENST00000480549 C4AP0C0L4 1744 aa19.83■□□□□ 0.77
SH3D21-203ENST00000480549 C4BP0C0L5 1744 aa19.83■□□□□ 0.77
SH3D21-203ENST00000480549 SLC5A1P13866 664 aa19.83■□□□□ 0.76
SH3D21-203ENST00000480549 TTF1Q15361 905 aaPredicted RBP19.83■□□□□ 0.76
SH3D21-203ENST00000480549 TBC1D9BQ66K14 1250 aa19.83■□□□□ 0.76
SH3D21-203ENST00000480549 IGHMBP2P38935 993 aaKnown RBP19.83■□□□□ 0.76
SH3D21-203ENST00000480549 TTLL5Q6EMB2 1281 aa19.83■□□□□ 0.76
SH3D21-203ENST00000480549 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.83■□□□□ 0.763e-7■■■□□ 17.8
SH3D21-203ENST00000480549 E7EWF7 191 aa19.82■□□□□ 0.76
SH3D21-203ENST00000480549 HMGB1P09429 215 aaKnown RBP19.82■□□□□ 0.76
SH3D21-203ENST00000480549 ZNF710Q8N1W2 664 aa19.82■□□□□ 0.76
SH3D21-203ENST00000480549 NARFQ9UHQ1 456 aa19.82■□□□□ 0.76
SH3D21-203ENST00000480549 AFF2P51816 1311 aa19.82■□□□□ 0.76
SH3D21-203ENST00000480549 HSPA1LP34931 641 aa19.82■□□□□ 0.76
SH3D21-203ENST00000480549 EXOSC10Q01780 885 aaKnown RBP19.81■□□□□ 0.76
SH3D21-203ENST00000480549 SF3B3Q15393 1217 aaKnown RBP19.81■□□□□ 0.76
SH3D21-203ENST00000480549 MEX3CQ5U5Q3 659 aaKnown RBP19.81■□□□□ 0.76
SH3D21-203ENST00000480549 DHX32Q7L7V1 743 aaKnown RBP19.81■□□□□ 0.76
SH3D21-203ENST00000480549 CCNL1Q9UK58 526 aaPredicted RBP19.81■□□□□ 0.76
SH3D21-203ENST00000480549 MTMR6Q9Y217 621 aa19.81■□□□□ 0.76
SH3D21-203ENST00000480549 ONECUT3O60422 494 aaPredicted RBP19.81■□□□□ 0.76
SH3D21-203ENST00000480549 F13A1P00488 732 aa19.81■□□□□ 0.76
SH3D21-203ENST00000480549 AMIGO3Q86WK7 504 aa19.81■□□□□ 0.76
SH3D21-203ENST00000480549 GPAA1O43292 621 aa19.81■□□□□ 0.76
SH3D21-203ENST00000480549 ZSCAN25Q6NSZ9 544 aa19.81■□□□□ 0.76
SH3D21-203ENST00000480549 ZNF771Q7L3S4 317 aaPredicted RBP19.81■□□□□ 0.76
SH3D21-203ENST00000480549 SRP68Q9UHB9 627 aaKnown RBP19.81■□□□□ 0.76
SH3D21-203ENST00000480549 CHRNDQ07001 517 aa19.8■□□□□ 0.76
SH3D21-203ENST00000480549 SLC9C2Q5TAH2 1124 aa19.8■□□□□ 0.76
SH3D21-203ENST00000480549 AGXT2Q9BYV1 514 aa19.8■□□□□ 0.76
SH3D21-203ENST00000480549 RASGRF1Q13972 1273 aa19.8■□□□□ 0.76
SH3D21-203ENST00000480549 UBE3CQ15386 1083 aa19.8■□□□□ 0.76
SH3D21-203ENST00000480549 FOXD4L6Q3SYB3 417 aaPredicted RBP19.8■□□□□ 0.76
SH3D21-203ENST00000480549 FOXD4L3Q6VB84 417 aaPredicted RBP19.8■□□□□ 0.76
SH3D21-203ENST00000480549 GTF3C6Q969F1 213 aa19.8■□□□□ 0.76
SH3D21-203ENST00000480549 LRRC2Q9BYS8 371 aa19.8■□□□□ 0.76
SH3D21-203ENST00000480549 NSFL1CQ9UNZ2 370 aaKnown RBP19.8■□□□□ 0.76
SH3D21-203ENST00000480549 GNPATO15228 680 aa19.79■□□□□ 0.76
SH3D21-203ENST00000480549 SLC10A5Q5PT55 438 aa19.79■□□□□ 0.76
SH3D21-203ENST00000480549 BICDL1Q6ZP65 573 aa19.79■□□□□ 0.76
SH3D21-203ENST00000480549 SPATA5Q8NB90 893 aa19.79■□□□□ 0.76
SH3D21-203ENST00000480549 TCRBV5S4A2TA0A5A2 114 aa19.79■□□□□ 0.76
SH3D21-203ENST00000480549 FGAP02671 866 aa19.79■□□□□ 0.76
SH3D21-203ENST00000480549 STK3Q13188 491 aa19.79■□□□□ 0.76
SH3D21-203ENST00000480549 CAVIN1Q6NZI2 390 aaKnown RBP19.79■□□□□ 0.76
SH3D21-203ENST00000480549 TAF3Q5VWG9 929 aa19.79■□□□□ 0.76
SH3D21-203ENST00000480549 BRF1Q92994 677 aa19.79■□□□□ 0.76
SH3D21-203ENST00000480549 CDC5LQ99459 802 aaKnown RBP19.79■□□□□ 0.76
SH3D21-203ENST00000480549 RBSNQ9H1K0 784 aa19.79■□□□□ 0.76
SH3D21-203ENST00000480549 CTNNA3Q9UI47 895 aa19.79■□□□□ 0.76
SH3D21-203ENST00000480549 WWC3Q9ULE0 1092 aa19.79■□□□□ 0.76
SH3D21-203ENST00000480549 IDH1O75874 414 aaKnown RBP19.78■□□□□ 0.76
SH3D21-203ENST00000480549 MYRIPQ8NFW9 859 aa19.78■□□□□ 0.76
SH3D21-203ENST00000480549 ZFP91Q96JP5 570 aaPredicted RBP19.78■□□□□ 0.76
SH3D21-203ENST00000480549 PDE6AP16499 860 aa19.78■□□□□ 0.76
SH3D21-203ENST00000480549 ZNF532Q9HCE3 1301 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms