RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 TICAM2Q86XR7 235 aa21.26■□□□□ 0.99
UPF3A-206ENST00000480362 ESYT1Q9BSJ8 1104 aa21.26■□□□□ 0.99
UPF3A-206ENST00000480362 FHDC1Q9C0D6 1143 aaPredicted RBP21.26■□□□□ 0.99
UPF3A-206ENST00000480362 COA1Q9GZY4 146 aa21.26■□□□□ 0.99
UPF3A-206ENST00000480362 TSHZ2Q9NRE2 1034 aa21.26■□□□□ 0.99
UPF3A-206ENST00000480362 COL1A1P02452 1464 aaPredicted RBP21.26■□□□□ 0.99
UPF3A-206ENST00000480362 MFAP1P55081 439 aaKnown RBP21.25■□□□□ 0.99
UPF3A-206ENST00000480362 CHAF1AQ13111 956 aaPredicted RBP21.25■□□□□ 0.99
UPF3A-206ENST00000480362 NMIQ13287 307 aaPredicted RBP21.25■□□□□ 0.99
UPF3A-206ENST00000480362 LRRFIP1Q32MZ4 808 aaKnown RBP21.25■□□□□ 0.99
UPF3A-206ENST00000480362 CWC27Q6UX04 472 aaKnown RBP21.25■□□□□ 0.99
UPF3A-206ENST00000480362 RUFY2Q8WXA3 655 aa21.25■□□□□ 0.99
UPF3A-206ENST00000480362 BCS1LQ9Y276 419 aa21.25■□□□□ 0.99
UPF3A-206ENST00000480362 PDS5AQ29RF7 1337 aaKnown RBP21.25■□□□□ 0.99
UPF3A-206ENST00000480362 G3V3G9 751 aa21.24■□□□□ 0.99
UPF3A-206ENST00000480362 RNF113AO15541 343 aaKnown RBP21.24■□□□□ 0.99
UPF3A-206ENST00000480362 EIF5BO60841 1220 aaKnown RBP21.24■□□□□ 0.99
UPF3A-206ENST00000480362 IDH1O75874 414 aaKnown RBP21.24■□□□□ 0.99
UPF3A-206ENST00000480362 DOK7Q18PE1 504 aa21.24■□□□□ 0.99
UPF3A-206ENST00000480362 DCAF8Q5TAQ9 597 aa21.24■□□□□ 0.99
UPF3A-206ENST00000480362 FAM227BQ96M60 508 aa21.24■□□□□ 0.99
UPF3A-206ENST00000480362 PSMD1Q99460 953 aa21.24■□□□□ 0.99
UPF3A-206ENST00000480362 CHGBP05060 677 aa21.23■□□□□ 0.99
UPF3A-206ENST00000480362 ZFYP08048 801 aaPredicted RBP21.23■□□□□ 0.99
UPF3A-206ENST00000480362 ZSCAN25Q6NSZ9 544 aa21.23■□□□□ 0.99
UPF3A-206ENST00000480362 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.23■□□□□ 0.99
UPF3A-206ENST00000480362 LRP2BPQ9P2M1 347 aa21.23■□□□□ 0.99
UPF3A-206ENST00000480362 MYH13Q9UKX3 1938 aa21.22■□□□□ 0.99
UPF3A-206ENST00000480362 SGSM2O43147 1006 aa21.22■□□□□ 0.99
UPF3A-206ENST00000480362 AOC3Q16853 763 aa21.22■□□□□ 0.99
UPF3A-206ENST00000480362 SLFNL1Q499Z3 407 aa21.22■□□□□ 0.99
UPF3A-206ENST00000480362 WDR66Q8TBY9 1149 aa21.22■□□□□ 0.99
UPF3A-206ENST00000480362 IL25Q9H293 177 aa21.22■□□□□ 0.99
UPF3A-206ENST00000480362 ABCF2Q9UG63 623 aa21.22■□□□□ 0.99
UPF3A-206ENST00000480362 JAG2Q9Y219 1238 aa21.22■□□□□ 0.99
UPF3A-206ENST00000480362 A0A0D9SFI3 127 aa21.21■□□□□ 0.99
UPF3A-206ENST00000480362 KIAA2012Q0VF49 1180 aa21.21■□□□□ 0.99
UPF3A-206ENST00000480362 MAP3K12Q12852 859 aa21.21■□□□□ 0.99
UPF3A-206ENST00000480362 ZMYM1Q5SVZ6 1142 aa21.21■□□□□ 0.99
UPF3A-206ENST00000480362 SLC9C2Q5TAH2 1124 aa21.21■□□□□ 0.99
UPF3A-206ENST00000480362 MYO5AQ9Y4I1 1855 aaKnown RBP21.2■□□□□ 0.98
UPF3A-206ENST00000480362 PPIP5K2O43314 1243 aa21.2■□□□□ 0.98
UPF3A-206ENST00000480362 REC8O95072 547 aa21.2■□□□□ 0.98
UPF3A-206ENST00000480362 ADD2P35612 726 aa21.2■□□□□ 0.98
UPF3A-206ENST00000480362 SYT17Q9BSW7 474 aa21.2■□□□□ 0.98
UPF3A-206ENST00000480362 UPF2Q9HAU5 1272 aaKnown RBP21.2■□□□□ 0.98
UPF3A-206ENST00000480362 HELLSQ9NRZ9 838 aa21.2■□□□□ 0.98
UPF3A-206ENST00000480362 PDE6AP16499 860 aa21.19■□□□□ 0.98
UPF3A-206ENST00000480362 ERICH6Q7L0X2 663 aa21.19■□□□□ 0.98
UPF3A-206ENST00000480362 PODNQ7Z5L7 613 aa21.19■□□□□ 0.98
UPF3A-206ENST00000480362 SEC62Q99442 399 aaKnown RBP21.19■□□□□ 0.98
UPF3A-206ENST00000480362 VPS33BQ9H267 617 aa21.19■□□□□ 0.98
UPF3A-206ENST00000480362 DBNDD1Q9H9R9 158 aa21.19■□□□□ 0.98
UPF3A-206ENST00000480362 RAI14Q9P0K7 980 aa21.19■□□□□ 0.98
UPF3A-206ENST00000480362 DOCK2Q92608 1830 aa21.19■□□□□ 0.98
UPF3A-206ENST00000480362 FAM205AQ6ZU69 1335 aa21.19■□□□□ 0.98
UPF3A-206ENST00000480362 SALL1Q9NSC2 1324 aa21.19■□□□□ 0.98
UPF3A-206ENST00000480362 ECE2O60344 883 aa21.18■□□□□ 0.98
UPF3A-206ENST00000480362 GTF2IP78347 998 aa21.18■□□□□ 0.98
UPF3A-206ENST00000480362 UBE3CQ15386 1083 aa21.18■□□□□ 0.98
UPF3A-206ENST00000480362 MCMDC2Q4G0Z9 681 aa21.18■□□□□ 0.98
UPF3A-206ENST00000480362 SPTY2D1Q68D10 685 aaPredicted RBP21.18■□□□□ 0.98
UPF3A-206ENST00000480362 ZGPATQ8N5A5 531 aaKnown RBP21.18■□□□□ 0.98
UPF3A-206ENST00000480362 MAGEB6Q8N7X4 407 aa21.18■□□□□ 0.98
UPF3A-206ENST00000480362 APPBP2Q92624 585 aa21.18■□□□□ 0.98
UPF3A-206ENST00000480362 ZNF277Q9NRM2 450 aaPredicted RBP21.18■□□□□ 0.98
UPF3A-206ENST00000480362 RAD50Q92878 1312 aa21.18■□□□□ 0.98
UPF3A-206ENST00000480362 FBXW7Q969H0 707 aa21.17■□□□□ 0.98
UPF3A-206ENST00000480362 OSBP2Q969R2 916 aa21.17■□□□□ 0.98
UPF3A-206ENST00000480362 USP26Q9BXU7 913 aa21.17■□□□□ 0.98
UPF3A-206ENST00000480362 ANO2Q9NQ90 1003 aa21.17■□□□□ 0.98
UPF3A-206ENST00000480362 ZNF532Q9HCE3 1301 aa21.17■□□□□ 0.98
UPF3A-206ENST00000480362 MYH7P12883 1935 aa21.17■□□□□ 0.98
UPF3A-206ENST00000480362 CHD4Q14839 1912 aa21.16■□□□□ 0.98
UPF3A-206ENST00000480362 TCRBV5S4A2TA0A5A2 114 aa21.16■□□□□ 0.98
UPF3A-206ENST00000480362 KIAA1211Q6ZU35 1233 aa21.16■□□□□ 0.98
UPF3A-206ENST00000480362 LARGE2Q8N3Y3 721 aa21.16■□□□□ 0.98
UPF3A-206ENST00000480362 TBC1D22AQ8WUA7 517 aa21.16■□□□□ 0.98
UPF3A-206ENST00000480362 TAOK3Q9H2K8 898 aa21.16■□□□□ 0.98
UPF3A-206ENST00000480362 FER1L6Q2WGJ9 1857 aa21.15■□□□□ 0.98
UPF3A-206ENST00000480362 M0R2C6 588 aa21.15■□□□□ 0.98
UPF3A-206ENST00000480362 NFKBIEO00221 500 aa21.15■□□□□ 0.98
UPF3A-206ENST00000480362 LDHBP07195 334 aaKnown RBP21.15■□□□□ 0.98
UPF3A-206ENST00000480362 PRDX5P30044 214 aa21.15■□□□□ 0.98
UPF3A-206ENST00000480362 TTLL5Q6EMB2 1281 aa21.15■□□□□ 0.98
UPF3A-206ENST00000480362 CCDC129Q6ZRS4 1044 aa21.15■□□□□ 0.98
UPF3A-206ENST00000480362 ZNF589Q86UQ0 364 aaPredicted RBP21.15■□□□□ 0.98
UPF3A-206ENST00000480362 C22orf23Q9BZE7 217 aa21.15■□□□□ 0.98
UPF3A-206ENST00000480362 KCNQ5Q9NR82 932 aa21.15■□□□□ 0.98
UPF3A-206ENST00000480362 ARFGEF1Q9Y6D6 1849 aa21.15■□□□□ 0.98
UPF3A-206ENST00000480362 MAST3O60307 1309 aa21.14■□□□□ 0.97
UPF3A-206ENST00000480362 CYP7A1P22680 504 aa21.14■□□□□ 0.97
UPF3A-206ENST00000480362 IARSP41252 1262 aaKnown RBP21.14■□□□□ 0.97
UPF3A-206ENST00000480362 MECOMQ03112 1051 aa21.14■□□□□ 0.97
UPF3A-206ENST00000480362 GRIK5Q16478 980 aa21.14■□□□□ 0.97
UPF3A-206ENST00000480362 MFSD14BQ5SR56 506 aa21.14■□□□□ 0.97
UPF3A-206ENST00000480362 NSUN4Q96CB9 384 aaKnown RBP21.14■□□□□ 0.97
UPF3A-206ENST00000480362 LSG1Q9H089 658 aaKnown RBP21.14■□□□□ 0.97
UPF3A-206ENST00000480362 PUS7LQ9H0K6 701 aaKnown RBP21.14■□□□□ 0.97
UPF3A-206ENST00000480362 CCDC171Q6TFL3 1326 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms