RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 SEC62Q99442 399 aaKnown RBP13.16□□□□□ -0.3
VTI1A-204ENST00000480057 ZMYM6O95789 1325 aa13.15□□□□□ -0.3
VTI1A-204ENST00000480057 TCRBV5S4A2TA0A5A2 114 aa13.15□□□□□ -0.3
VTI1A-204ENST00000480057 M0R2C6 588 aa13.15□□□□□ -0.3
VTI1A-204ENST00000480057 PDE6AP16499 860 aa13.15□□□□□ -0.3
VTI1A-204ENST00000480057 BCAMP50895 628 aa13.15□□□□□ -0.3
VTI1A-204ENST00000480057 SLC9C2Q5TAH2 1124 aa13.15□□□□□ -0.3
VTI1A-204ENST00000480057 BLOC1S2Q6QNY1 142 aa13.15□□□□□ -0.3
VTI1A-204ENST00000480057 CCDC129Q6ZRS4 1044 aa13.15□□□□□ -0.3
VTI1A-204ENST00000480057 BRIP1Q9BX63 1249 aa13.15□□□□□ -0.3
VTI1A-204ENST00000480057 UPF3BQ9BZI7 483 aaKnown RBP13.15□□□□□ -0.3
VTI1A-204ENST00000480057 PDRG1Q9NUG6 133 aa13.15□□□□□ -0.3
VTI1A-204ENST00000480057 LIMCH1Q9UPQ0 1083 aa13.15□□□□□ -0.3
VTI1A-204ENST00000480057 LRRC37AA6NMS7 1700 aa13.15□□□□□ -0.3
VTI1A-204ENST00000480057 DUOX1Q9NRD9 1551 aa13.15□□□□□ -0.3
VTI1A-204ENST00000480057 XDHP47989 1333 aa13.14□□□□□ -0.31
VTI1A-204ENST00000480057 PNPLA7Q6ZV29 1317 aa13.14□□□□□ -0.31
VTI1A-204ENST00000480057 IRS2Q9Y4H2 1338 aa13.14□□□□□ -0.31
VTI1A-204ENST00000480057 IDH1O75874 414 aaKnown RBP13.14□□□□□ -0.31
VTI1A-204ENST00000480057 AK2P54819 239 aa13.14□□□□□ -0.31
VTI1A-204ENST00000480057 NUCB2P80303 420 aa13.14□□□□□ -0.31
VTI1A-204ENST00000480057 ADCK5Q3MIX3 580 aa13.14□□□□□ -0.31
VTI1A-204ENST00000480057 FAM84BQ96KN1 310 aaPredicted RBP13.14□□□□□ -0.31
VTI1A-204ENST00000480057 CAMKK2Q96RR4 588 aa13.14□□□□□ -0.31
VTI1A-204ENST00000480057 SH2B1Q9NRF2 756 aaPredicted RBP13.14□□□□□ -0.31
VTI1A-204ENST00000480057 ZNF532Q9HCE3 1301 aa13.13□□□□□ -0.31
VTI1A-204ENST00000480057 ANKRD31Q8N7Z5 1873 aa13.13□□□□□ -0.31
VTI1A-204ENST00000480057 SNAP23O00161 211 aa13.13□□□□□ -0.31
VTI1A-204ENST00000480057 GPAA1O43292 621 aa13.13□□□□□ -0.31
VTI1A-204ENST00000480057 CHGBP05060 677 aa13.13□□□□□ -0.31
VTI1A-204ENST00000480057 CYP21A2P08686 494 aa13.13□□□□□ -0.31
VTI1A-204ENST00000480057 GNAT2P19087 354 aa13.13□□□□□ -0.31
VTI1A-204ENST00000480057 RPS6KB1P23443 525 aa13.13□□□□□ -0.31
VTI1A-204ENST00000480057 ATP2B4P23634 1241 aa13.13□□□□□ -0.31
VTI1A-204ENST00000480057 HIBADHP31937 336 aaKnown RBP13.13□□□□□ -0.31
VTI1A-204ENST00000480057 RAB3GAP1Q15042 981 aa13.13□□□□□ -0.31
VTI1A-204ENST00000480057 NFKBIBQ15653 356 aa13.13□□□□□ -0.31
VTI1A-204ENST00000480057 VPS37DQ86XT2 251 aa13.13□□□□□ -0.31
VTI1A-204ENST00000480057 CCDC24Q8N4L8 307 aa13.13□□□□□ -0.31
VTI1A-204ENST00000480057 SPRYD3Q8NCJ5 442 aa13.13□□□□□ -0.31
VTI1A-204ENST00000480057 NEK1Q96PY6 1258 aa13.13□□□□□ -0.31
VTI1A-204ENST00000480057 PUS7LQ9H0K6 701 aaKnown RBP13.13□□□□□ -0.31
VTI1A-204ENST00000480057 MYH13Q9UKX3 1938 aa13.12□□□□□ -0.31
VTI1A-204ENST00000480057 PDE6BP35913 854 aa13.12□□□□□ -0.31
VTI1A-204ENST00000480057 GYG1P46976 350 aa13.12□□□□□ -0.31
VTI1A-204ENST00000480057 ALX1Q15699 326 aa13.12□□□□□ -0.31
VTI1A-204ENST00000480057 STK32BQ9NY57 414 aa13.12□□□□□ -0.31
VTI1A-204ENST00000480057 PODXL2Q9NZ53 605 aa13.12□□□□□ -0.31
VTI1A-204ENST00000480057 WWC3Q9ULE0 1092 aa13.12□□□□□ -0.31
VTI1A-204ENST00000480057 PARP3Q9Y6F1 533 aa13.12□□□□□ -0.31
VTI1A-204ENST00000480057 MYO5AQ9Y4I1 1855 aaKnown RBP13.12□□□□□ -0.31
VTI1A-204ENST00000480057 MAST2Q6P0Q8 1798 aa13.12□□□□□ -0.31
VTI1A-204ENST00000480057 SALL1Q9NSC2 1324 aa13.12□□□□□ -0.31
VTI1A-204ENST00000480057 SLC15A2Q16348 729 aa13.11□□□□□ -0.31
VTI1A-204ENST00000480057 IMMTQ16891 758 aaKnown RBP13.11□□□□□ -0.31
VTI1A-204ENST00000480057 SLFNL1Q499Z3 407 aa13.11□□□□□ -0.31
VTI1A-204ENST00000480057 CLEC17AQ6ZS10 378 aa13.11□□□□□ -0.31
VTI1A-204ENST00000480057 MAGEB6Q8N7X4 407 aa13.11□□□□□ -0.31
VTI1A-204ENST00000480057 LRP2BPQ9P2M1 347 aa13.11□□□□□ -0.31
VTI1A-204ENST00000480057 LAMA4Q16363 1823 aa13.11□□□□□ -0.31
VTI1A-204ENST00000480057 KIAA1551Q9HCM1 1747 aa13.1□□□□□ -0.31
VTI1A-204ENST00000480057 COL1A1P02452 1464 aaPredicted RBP13.1□□□□□ -0.31
VTI1A-204ENST00000480057 FOXP2O15409 715 aa13.1□□□□□ -0.31
VTI1A-204ENST00000480057 MMP10P09238 476 aa13.1□□□□□ -0.31
VTI1A-204ENST00000480057 PDIA4P13667 645 aaKnown RBP13.1□□□□□ -0.31
VTI1A-204ENST00000480057 NPR1P16066 1061 aa13.1□□□□□ -0.31
VTI1A-204ENST00000480057 ALDH1B1P30837 517 aa13.1□□□□□ -0.31
VTI1A-204ENST00000480057 BAG6P46379 1132 aa13.1□□□□□ -0.31
VTI1A-204ENST00000480057 SF3B2Q13435 895 aaKnown RBP13.1□□□□□ -0.31
VTI1A-204ENST00000480057 SP8Q8IXZ3 490 aa13.1□□□□□ -0.31
VTI1A-204ENST00000480057 FBXL16Q8N461 479 aa13.1□□□□□ -0.31
VTI1A-204ENST00000480057 ZGPATQ8N5A5 531 aaKnown RBP13.1□□□□□ -0.31
VTI1A-204ENST00000480057 CNKSR2Q8WXI2 1034 aa13.1□□□□□ -0.31
VTI1A-204ENST00000480057 AIDAQ96BJ3 306 aa13.1□□□□□ -0.31
VTI1A-204ENST00000480057 STRBPQ96SI9 672 aaKnown RBP13.1□□□□□ -0.31
VTI1A-204ENST00000480057 ANKIB1Q9P2G1 1089 aa13.1□□□□□ -0.31
VTI1A-204ENST00000480057 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.1□□□□□ -0.31
VTI1A-204ENST00000480057 LTBP1Q14766 1721 aa13.1□□□□□ -0.31
VTI1A-204ENST00000480057 WDR19Q8NEZ3 1342 aa13.1□□□□□ -0.31
VTI1A-204ENST00000480057 FGAP02671 866 aa13.09□□□□□ -0.31
VTI1A-204ENST00000480057 SRGNP10124 158 aa13.09□□□□□ -0.31
VTI1A-204ENST00000480057 SPTY2D1Q68D10 685 aaPredicted RBP13.09□□□□□ -0.31
VTI1A-204ENST00000480057 DHX32Q7L7V1 743 aaKnown RBP13.09□□□□□ -0.31
VTI1A-204ENST00000480057 ZNF804AQ7Z570 1209 aa13.09□□□□□ -0.31
VTI1A-204ENST00000480057 CHMP4CQ96CF2 233 aa13.09□□□□□ -0.31
VTI1A-204ENST00000480057 CACNA1SQ13698 1873 aa13.08□□□□□ -0.32
VTI1A-204ENST00000480057 PATL2C9JE40 543 aaKnown RBP13.08□□□□□ -0.32
VTI1A-204ENST00000480057 E7EWF7 191 aa13.08□□□□□ -0.32
VTI1A-204ENST00000480057 ZNF213O14771 459 aa13.08□□□□□ -0.32
VTI1A-204ENST00000480057 PTMSP20962 102 aa13.08□□□□□ -0.32
VTI1A-204ENST00000480057 GPSM2P81274 684 aa13.08□□□□□ -0.32
VTI1A-204ENST00000480057 EXOSC10Q01780 885 aaKnown RBP13.08□□□□□ -0.32
VTI1A-204ENST00000480057 EZH2Q15910 746 aaKnown RBP13.08□□□□□ -0.32
VTI1A-204ENST00000480057 TDRD7Q8NHU6 1098 aaKnown RBP13.08□□□□□ -0.32
VTI1A-204ENST00000480057 WDR66Q8TBY9 1149 aa13.08□□□□□ -0.32
VTI1A-204ENST00000480057 GBP4Q96PP9 640 aa13.08□□□□□ -0.32
VTI1A-204ENST00000480057 AGXT2Q9BYV1 514 aa13.08□□□□□ -0.32
VTI1A-204ENST00000480057 GGA1Q9UJY5 639 aa13.08□□□□□ -0.32
VTI1A-204ENST00000480057 ATP6V0A2Q9Y487 856 aa13.08□□□□□ -0.32
VTI1A-204ENST00000480057 TAF6LQ9Y6J9 622 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms