RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 MEGF10Q96KG7 1140 aa9.7□□□□□ -0.86
COMMD3-212ENST00000479958 TRAIPQ9BWF2 469 aa9.7□□□□□ -0.86
COMMD3-212ENST00000479958 LIN7BQ9HAP6 207 aa9.7□□□□□ -0.86
COMMD3-212ENST00000479958 KIAA0319Q5VV43 1072 aa9.69□□□□□ -0.86
COMMD3-212ENST00000479958 KCNK4Q9NYG8 393 aa9.69□□□□□ -0.86
COMMD3-212ENST00000479958 SOX1O00570 391 aaPredicted RBP9.68□□□□□ -0.86
COMMD3-212ENST00000479958 ORC1Q13415 861 aa9.68□□□□□ -0.86
COMMD3-212ENST00000479958 VN1R5Q7Z5H4 357 aa9.68□□□□□ -0.86
COMMD3-212ENST00000479958 CCNJLQ8IV13 435 aa9.68□□□□□ -0.86
COMMD3-212ENST00000479958 AGGF1Q8N302 714 aaeCLIP9.68□□□□□ -0.86
COMMD3-212ENST00000479958 CCDC180Q9P1Z9 1646 aa9.68□□□□□ -0.86
COMMD3-212ENST00000479958 A0A096LPE4 126 aa9.67□□□□□ -0.86
COMMD3-212ENST00000479958 A0A1W2PPZ6 126 aa9.67□□□□□ -0.86
COMMD3-212ENST00000479958 EIF1AYO14602 144 aaKnown RBP9.67□□□□□ -0.86
COMMD3-212ENST00000479958 DDX3YO15523 660 aaKnown RBP9.67□□□□□ -0.86
COMMD3-212ENST00000479958 USPL1Q5W0Q7 1092 aa9.67□□□□□ -0.86
COMMD3-212ENST00000479958 ALKBH8Q96BT7 664 aaKnown RBP9.67□□□□□ -0.86
COMMD3-212ENST00000479958 EHD4Q9H223 541 aa9.67□□□□□ -0.86
COMMD3-212ENST00000479958 SOX17Q9H6I2 414 aaPredicted RBP9.67□□□□□ -0.86
COMMD3-212ENST00000479958 PPP4R2Q9NY27 417 aa9.67□□□□□ -0.86
COMMD3-212ENST00000479958 TM4SF5O14894 197 aa9.66□□□□□ -0.86
COMMD3-212ENST00000479958 MAPK1P28482 360 aa9.66□□□□□ -0.86
COMMD3-212ENST00000479958 NLRP12P59046 1061 aa9.66□□□□□ -0.86
COMMD3-212ENST00000479958 PLCB3Q01970 1234 aa9.66□□□□□ -0.86
COMMD3-212ENST00000479958 Q6ZS46 218 aa9.66□□□□□ -0.86
COMMD3-212ENST00000479958 DDX54Q8TDD1 881 aaKnown RBP9.66□□□□□ -0.86
COMMD3-212ENST00000479958 CCDC74AQ96AQ1 378 aa9.66□□□□□ -0.86
COMMD3-212ENST00000479958 IVNS1ABPQ9Y6Y0 642 aa9.66□□□□□ -0.86
COMMD3-212ENST00000479958 GPR182O15218 404 aa9.65□□□□□ -0.86
COMMD3-212ENST00000479958 WISP1O95388 367 aa9.65□□□□□ -0.86
COMMD3-212ENST00000479958 KIAA1211Q6ZU35 1233 aa9.65□□□□□ -0.86
COMMD3-212ENST00000479958 FOXD4L4Q8WXT5 416 aaPredicted RBP9.65□□□□□ -0.86
COMMD3-212ENST00000479958 CSRNP1Q96S65 589 aa9.65□□□□□ -0.86
COMMD3-212ENST00000479958 RNF208Q9H0X6 261 aa9.65□□□□□ -0.86
COMMD3-212ENST00000479958 SART1O43290 800 aaKnown RBP9.65□□□□□ -0.87
COMMD3-212ENST00000479958 GADD45BO75293 160 aaPredicted RBP9.65□□□□□ -0.87
COMMD3-212ENST00000479958 ESRRAP11474 423 aaPredicted RBP9.65□□□□□ -0.87
COMMD3-212ENST00000479958 PRSS36Q5K4E3 855 aa9.65□□□□□ -0.87
COMMD3-212ENST00000479958 SLC51AQ86UW1 340 aa9.65□□□□□ -0.87
COMMD3-212ENST00000479958 ZSCAN29Q8IWY8 852 aaPredicted RBP9.65□□□□□ -0.87
COMMD3-212ENST00000479958 TCF12Q99081 682 aa9.65□□□□□ -0.87
COMMD3-212ENST00000479958 RUSC1Q9BVN2 902 aa9.65□□□□□ -0.87
COMMD3-212ENST00000479958 CLEC4MQ9H2X3 399 aaPredicted RBP9.65□□□□□ -0.87
COMMD3-212ENST00000479958 NPHS2Q9NP85 383 aa9.65□□□□□ -0.87
COMMD3-212ENST00000479958 METTL12A8MUP2 240 aa9.64□□□□□ -0.87
COMMD3-212ENST00000479958 ADAM11O75078 769 aa9.64□□□□□ -0.87
COMMD3-212ENST00000479958 IGHA2P01877 340 aa9.64□□□□□ -0.87
COMMD3-212ENST00000479958 PRR23CQ6ZRP0 262 aa9.64□□□□□ -0.87
COMMD3-212ENST00000479958 TMC7Q7Z402 723 aa9.64□□□□□ -0.87
COMMD3-212ENST00000479958 UBASH3BQ8TF42 649 aa9.64□□□□□ -0.87
COMMD3-212ENST00000479958 NLRP2Q9NX02 1062 aa9.64□□□□□ -0.87
COMMD3-212ENST00000479958 TRAK1Q9UPV9 953 aa9.64□□□□□ -0.87
COMMD3-212ENST00000479958 GSTM4Q03013 218 aa9.63□□□□□ -0.87
COMMD3-212ENST00000479958 PCDH1Q08174 1060 aa9.63□□□□□ -0.87
COMMD3-212ENST00000479958 SPRED3Q2MJR0 410 aa9.63□□□□□ -0.87
COMMD3-212ENST00000479958 UVSSAQ2YD98 709 aa9.63□□□□□ -0.87
COMMD3-212ENST00000479958 ANKRD34AQ69YU3 496 aa9.63□□□□□ -0.87
COMMD3-212ENST00000479958 UBL7Q96S82 380 aaPredicted RBP9.63□□□□□ -0.87
COMMD3-212ENST00000479958 ZFYVE1Q9HBF4 777 aa9.63□□□□□ -0.87
COMMD3-212ENST00000479958 MEGF11A6BM72 1044 aa9.62□□□□□ -0.87
COMMD3-212ENST00000479958 DHX15O43143 795 aaKnown RBP9.62□□□□□ -0.87
COMMD3-212ENST00000479958 GRIA4P48058 902 aa9.62□□□□□ -0.87
COMMD3-212ENST00000479958 HGSNATQ68CP4 663 aa9.62□□□□□ -0.87
COMMD3-212ENST00000479958 PDIA4P13667 645 aaKnown RBP9.61□□□□□ -0.87
COMMD3-212ENST00000479958 ZMYM1Q5SVZ6 1142 aa9.61□□□□□ -0.87
COMMD3-212ENST00000479958 NUTM2GQ5VZR2 741 aa9.61□□□□□ -0.87
COMMD3-212ENST00000479958 FDX2Q6P4F2 183 aa9.61□□□□□ -0.87
COMMD3-212ENST00000479958 USP26Q9BXU7 913 aa9.61□□□□□ -0.87
COMMD3-212ENST00000479958 STOML1Q9UBI4 398 aa9.61□□□□□ -0.87
COMMD3-212ENST00000479958 RAXQ9Y2V3 346 aa9.61□□□□□ -0.87
COMMD3-212ENST00000479958 CYP11A1P05108 521 aa9.6□□□□□ -0.87
COMMD3-212ENST00000479958 ITGB7P26010 798 aa9.6□□□□□ -0.87
COMMD3-212ENST00000479958 PTPN12Q05209 780 aaKnown RBP9.6□□□□□ -0.87
COMMD3-212ENST00000479958 UTP4Q969X6 686 aaKnown RBP9.6□□□□□ -0.87
COMMD3-212ENST00000479958 CYP4F12Q9HCS2 524 aa9.6□□□□□ -0.87
COMMD3-212ENST00000479958 EXOSC6Q5RKV6 272 aaKnown RBP9.59□□□□□ -0.87
COMMD3-212ENST00000479958 HP1BP3Q5SSJ5 553 aaPredicted RBP9.59□□□□□ -0.87
COMMD3-212ENST00000479958 ITPKAP23677 461 aa9.58□□□□□ -0.88
COMMD3-212ENST00000479958 ZNF423Q2M1K9 1284 aa9.58□□□□□ -0.88
COMMD3-212ENST00000479958 C12orf50Q8NA57 414 aaPredicted RBP9.58□□□□□ -0.88
COMMD3-212ENST00000479958 FAM46AQ96IP4 442 aaKnown RBP9.58□□□□□ -0.88
COMMD3-212ENST00000479958 TMEM238LA0A1B0GVL6 79 aa9.57□□□□□ -0.88
COMMD3-212ENST00000479958 GSC2O15499 205 aa9.57□□□□□ -0.88
COMMD3-212ENST00000479958 TREHO43280 583 aa9.57□□□□□ -0.88
COMMD3-212ENST00000479958 DSC3Q14574 896 aa9.57□□□□□ -0.88
COMMD3-212ENST00000479958 PRPF40BQ6NWY9 871 aaKnown RBP9.57□□□□□ -0.88
COMMD3-212ENST00000479958 EPS8L3Q8TE67 593 aaKnown RBP9.57□□□□□ -0.88
COMMD3-212ENST00000479958 LOC100289279A0A1B0GTE1 492 aa9.56□□□□□ -0.88
COMMD3-212ENST00000479958 RPS26P11Q5JNZ5 115 aaPredicted RBP9.56□□□□□ -0.88
COMMD3-212ENST00000479958 GAS2O43903 313 aaKnown RBP9.56□□□□□ -0.88
COMMD3-212ENST00000479958 XP32Q5T750 250 aa9.56□□□□□ -0.88
COMMD3-212ENST00000479958 ARMC10Q8N2F6 343 aa9.56□□□□□ -0.88
COMMD3-212ENST00000479958 SMG8Q8ND04 991 aaKnown RBP9.56□□□□□ -0.88
COMMD3-212ENST00000479958 MYRFLQ96LU7 910 aa9.56□□□□□ -0.88
COMMD3-212ENST00000479958 TMPRSS13Q9BYE2 586 aa9.56□□□□□ -0.88
COMMD3-212ENST00000479958 ZNF576Q9H609 170 aa9.56□□□□□ -0.88
COMMD3-212ENST00000479958 SUGCTQ9HAC7 445 aa9.56□□□□□ -0.88
COMMD3-212ENST00000479958 HIF3AQ9Y2N7 669 aa9.56□□□□□ -0.88
COMMD3-212ENST00000479958 PNMA6FA0A0J9YX94 578 aa9.55□□□□□ -0.88
COMMD3-212ENST00000479958 B3GALT4O96024 378 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms