RNA–Protein interactions for RNA: ENST00000479866.5

RAPGEF3-209, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,917 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-209ENST00000479866 UFL1O94874 794 aa13.51□□□□□ -0.25
RAPGEF3-209ENST00000479866 EN1Q05925 392 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF3-209ENST00000479866 PRPF40AO75400 957 aaKnown RBP13.5□□□□□ -0.25
RAPGEF3-209ENST00000479866 MBD4O95243 580 aa13.5□□□□□ -0.25
RAPGEF3-209ENST00000479866 CCDC144CPQ8IYA2 1237 aa13.5□□□□□ -0.25
RAPGEF3-209ENST00000479866 ARMT1Q9H993 441 aa13.5□□□□□ -0.25
RAPGEF3-209ENST00000479866 ZNF532Q9HCE3 1301 aa13.5□□□□□ -0.25
RAPGEF3-209ENST00000479866 ERICH2A1L162 156 aa13.5□□□□□ -0.25
RAPGEF3-209ENST00000479866 HSPA4P34932 840 aa13.5□□□□□ -0.25
RAPGEF3-209ENST00000479866 CEBPZQ03701 1054 aaKnown RBP13.5□□□□□ -0.25
RAPGEF3-209ENST00000479866 TNPO1Q92973 898 aaKnown RBP13.5□□□□□ -0.25
RAPGEF3-209ENST00000479866 LSG1Q9H089 658 aaKnown RBP13.5□□□□□ -0.25
RAPGEF3-209ENST00000479866 NUP133Q8WUM0 1156 aa13.5□□□□□ -0.25
RAPGEF3-209ENST00000479866 SNX21Q969T3 373 aa13.5□□□□□ -0.25
RAPGEF3-209ENST00000479866 SLC4A4Q9Y6R1 1079 aa13.5□□□□□ -0.25
RAPGEF3-209ENST00000479866 FIBPO43427 364 aa13.49□□□□□ -0.25
RAPGEF3-209ENST00000479866 HIBADHP31937 336 aaKnown RBP13.49□□□□□ -0.25
RAPGEF3-209ENST00000479866 LARP1BQ659C4 914 aaKnown RBP13.49□□□□□ -0.25
RAPGEF3-209ENST00000479866 MARF1Q9Y4F3 1742 aaKnown RBP13.49□□□□□ -0.25
RAPGEF3-209ENST00000479866 DDX11L8A8MPP1 907 aa13.49□□□□□ -0.25
RAPGEF3-209ENST00000479866 NTSR2O95665 410 aa13.49□□□□□ -0.25
RAPGEF3-209ENST00000479866 ZFYP08048 801 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF3-209ENST00000479866 MCAMP43121 646 aa13.49□□□□□ -0.25
RAPGEF3-209ENST00000479866 ANAPC15P60006 121 aa13.49□□□□□ -0.25
RAPGEF3-209ENST00000479866 NAA16Q6N069 864 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF3-209ENST00000479866 GDPD2Q9HCC8 539 aa13.49□□□□□ -0.25
RAPGEF3-209ENST00000479866 RIPOR2Q9Y4F9 1068 aa13.49□□□□□ -0.25
RAPGEF3-209ENST00000479866 CDHR2Q9BYE9 1310 aa13.49□□□□□ -0.25
RAPGEF3-209ENST00000479866 GUCY1B3Q02153 619 aa13.49□□□□□ -0.25
RAPGEF3-209ENST00000479866 GPATCH11Q8N954 259 aa13.49□□□□□ -0.25
RAPGEF3-209ENST00000479866 PIBF1Q8WXW3 757 aa13.49□□□□□ -0.25
RAPGEF3-209ENST00000479866 STK32BQ9NY57 414 aa13.49□□□□□ -0.25
RAPGEF3-209ENST00000479866 CSF1RP07333 972 aa13.48□□□□□ -0.25
RAPGEF3-209ENST00000479866 AMOTL1Q8IY63 956 aa13.48□□□□□ -0.25
RAPGEF3-209ENST00000479866 MCM4P33991 863 aa13.48□□□□□ -0.25
RAPGEF3-209ENST00000479866 USP5P45974 858 aa13.48□□□□□ -0.25
RAPGEF3-209ENST00000479866 Q6ZUG5 572 aa13.48□□□□□ -0.25
RAPGEF3-209ENST00000479866 C3orf67Q6ZVT6 689 aa13.48□□□□□ -0.25
RAPGEF3-209ENST00000479866 BANK1Q8NDB2 785 aa13.48□□□□□ -0.25
RAPGEF3-209ENST00000479866 LRRC4BQ9NT99 713 aa13.48□□□□□ -0.25
RAPGEF3-209ENST00000479866 APPBP2Q92624 585 aa13.48□□□□□ -0.25
RAPGEF3-209ENST00000479866 BCL9LQ86UU0 1499 aa13.48□□□□□ -0.25
RAPGEF3-209ENST00000479866 TRAK2O60296 914 aa13.47□□□□□ -0.25
RAPGEF3-209ENST00000479866 RANBP6O60518 1105 aaKnown RBP13.47□□□□□ -0.25
RAPGEF3-209ENST00000479866 MMP10P09238 476 aa13.47□□□□□ -0.25
RAPGEF3-209ENST00000479866 ANKRD1Q15327 319 aa13.47□□□□□ -0.25
RAPGEF3-209ENST00000479866 TICAM2Q86XR7 235 aa13.47□□□□□ -0.25
RAPGEF3-209ENST00000479866 OSBP2Q969R2 916 aa13.47□□□□□ -0.25
RAPGEF3-209ENST00000479866 LTBP4Q8N2S1 1624 aa13.47□□□□□ -0.25
RAPGEF3-209ENST00000479866 KCNA4P22459 653 aa13.47□□□□□ -0.25
RAPGEF3-209ENST00000479866 RASGRF1Q13972 1273 aa13.47□□□□□ -0.25
RAPGEF3-209ENST00000479866 CPLX2Q6PUV4 134 aaKnown RBP13.47□□□□□ -0.25
RAPGEF3-209ENST00000479866 HMG20BQ9P0W2 317 aa13.47□□□□□ -0.25
RAPGEF3-209ENST00000479866 XIRP1Q702N8 1843 aaKnown RBP13.47□□□□□ -0.25
RAPGEF3-209ENST00000479866 TRIM34Q9BYJ4 488 aa13.47□□□□□ -0.25
RAPGEF3-209ENST00000479866 ZC3H12CQ9C0D7 883 aaKnown RBP13.47□□□□□ -0.25
RAPGEF3-209ENST00000479866 CWC22Q9HCG8 908 aaKnown RBP13.47□□□□□ -0.25
RAPGEF3-209ENST00000479866 GPR108Q9NPR9 543 aa13.47□□□□□ -0.25
RAPGEF3-209ENST00000479866 RXRAP19793 462 aa13.46□□□□□ -0.25
RAPGEF3-209ENST00000479866 ANKRD2Q9GZV1 360 aa13.46□□□□□ -0.25
RAPGEF3-209ENST00000479866 PUS7LQ9H0K6 701 aaKnown RBP13.46□□□□□ -0.25
RAPGEF3-209ENST00000479866 SALL3Q9BXA9 1300 aa13.46□□□□□ -0.25
RAPGEF3-209ENST00000479866 WTIPA6NIX2 430 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF3-209ENST00000479866 TAF3Q5VWG9 929 aa13.46□□□□□ -0.25
RAPGEF3-209ENST00000479866 CHAMP1Q96JM3 812 aa13.46□□□□□ -0.25
RAPGEF3-209ENST00000479866 PIH1D3Q9NQM4 214 aaKnown RBP13.46□□□□□ -0.25
RAPGEF3-209ENST00000479866 HELLSQ9NRZ9 838 aa13.46□□□□□ -0.25
RAPGEF3-209ENST00000479866 PDE6AP16499 860 aa13.46□□□□□ -0.26
RAPGEF3-209ENST00000479866 RBM17Q96I25 401 aaKnown RBP13.46□□□□□ -0.26
RAPGEF3-209ENST00000479866 KIF2CQ99661 725 aa13.46□□□□□ -0.26
RAPGEF3-209ENST00000479866 ZKSCAN3Q9BRR0 538 aa13.46□□□□□ -0.26
RAPGEF3-209ENST00000479866 MINPP1Q9UNW1 487 aa13.46□□□□□ -0.26
RAPGEF3-209ENST00000479866 KIF3AQ9Y496 699 aa13.46□□□□□ -0.26
RAPGEF3-209ENST00000479866 M0R2C6 588 aa13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 HSPD1P10809 573 aaKnown RBP13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 ATP2B1P20020 1258 aa13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 GJB2P29033 226 aa13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 APOBRQ0VD83 1088 aa13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 RUFY3Q7L099 469 aa13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 COL14A1Q05707 1796 aaKnown RBP13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 DISP2A7MBM2 1401 aa13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 MICU3Q86XE3 530 aa13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 MAST3O60307 1309 aa13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 CYP2E1P05181 493 aaPredicted RBP13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 ATP2B2Q01814 1243 aa13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 AKAP17AQ02040 695 aaKnown RBP13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 PKP1Q13835 747 aa13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 SART3Q15020 963 aaKnown RBP13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 DEFB132Q7Z7B7 95 aa13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 ZSCAN31Q96LW9 406 aaPredicted RBP13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 PLA2G12BQ9BX93 195 aa13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 AATFQ9NY61 560 aaKnown RBP eCLIP13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 PRDM1O75626 825 aa13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 CLSTN1O94985 981 aa13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 RC3H1Q5TC82 1133 aaKnown RBP13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 SDR42E1Q8WUS8 393 aa13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 UBAC1Q9BSL1 405 aa13.45□□□□□ -0.26
RAPGEF3-209ENST00000479866 SLIT2O94813 1529 aa13.44□□□□□ -0.26
RAPGEF3-209ENST00000479866 MAGEB6P1A0A0J9YX57 407 aa13.44□□□□□ -0.26
RAPGEF3-209ENST00000479866 IFIT3O14879 490 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms