RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 PNPLA7Q6ZV29 1317 aa17.22■□□□□ 0.35
CLDN18-203ENST00000479660 MYO5AQ9Y4I1 1855 aaKnown RBP17.22■□□□□ 0.35
CLDN18-203ENST00000479660 EZH2Q15910 746 aaKnown RBP17.21■□□□□ 0.35
CLDN18-203ENST00000479660 BLOC1S2Q6QNY1 142 aa17.21■□□□□ 0.35
CLDN18-203ENST00000479660 FBXO33Q7Z6M2 555 aa17.21■□□□□ 0.35
CLDN18-203ENST00000479660 CWC22Q9HCG8 908 aaKnown RBP17.21■□□□□ 0.35
CLDN18-203ENST00000479660 KLRK1P26718 216 aa17.21■□□□□ 0.35
CLDN18-203ENST00000479660 CUL4AQ13619 759 aa17.21■□□□□ 0.35
CLDN18-203ENST00000479660 ZGPATQ8N5A5 531 aaKnown RBP17.21■□□□□ 0.35
CLDN18-203ENST00000479660 MAGEB6Q8N7X4 407 aa17.21■□□□□ 0.35
CLDN18-203ENST00000479660 CAMKK2Q96RR4 588 aa17.21■□□□□ 0.35
CLDN18-203ENST00000479660 LIMCH1Q9UPQ0 1083 aa17.21■□□□□ 0.35
CLDN18-203ENST00000479660 TCRBV5S4A2TA0A5A2 114 aa17.2■□□□□ 0.34
CLDN18-203ENST00000479660 LRP2BPQ9P2M1 347 aa17.2■□□□□ 0.34
CLDN18-203ENST00000479660 DENND2AQ9ULE3 1009 aa17.2■□□□□ 0.34
CLDN18-203ENST00000479660 RGPD3A6NKT7 1758 aaPredicted RBP17.2■□□□□ 0.34
CLDN18-203ENST00000479660 RGPD4Q7Z3J3 1758 aa17.2■□□□□ 0.34
CLDN18-203ENST00000479660 KLRG2A4D1S0 409 aaPredicted RBP17.2■□□□□ 0.34
CLDN18-203ENST00000479660 FRAT2O75474 233 aaPredicted RBP17.2■□□□□ 0.34
CLDN18-203ENST00000479660 HIBADHP31937 336 aaKnown RBP17.2■□□□□ 0.34
CLDN18-203ENST00000479660 NEK1Q96PY6 1258 aa17.2■□□□□ 0.34
CLDN18-203ENST00000479660 LARP6Q9BRS8 491 aaKnown RBP17.2■□□□□ 0.34
CLDN18-203ENST00000479660 CTNNA3Q9UI47 895 aa17.2■□□□□ 0.34
CLDN18-203ENST00000479660 BBOX1O75936 387 aa17.19■□□□□ 0.34
CLDN18-203ENST00000479660 MMP10P09238 476 aa17.19■□□□□ 0.34
CLDN18-203ENST00000479660 RPS6KB1P23443 525 aa17.19■□□□□ 0.34
CLDN18-203ENST00000479660 HOXA10P31260 410 aaPredicted RBP17.19■□□□□ 0.34
CLDN18-203ENST00000479660 ABCF2Q9UG63 623 aa17.19■□□□□ 0.34
CLDN18-203ENST00000479660 LEMD3Q9Y2U8 911 aa17.19■□□□□ 0.34
CLDN18-203ENST00000479660 FOXP2O15409 715 aa17.18■□□□□ 0.34
CLDN18-203ENST00000479660 COL9A3Q14050 684 aaPredicted RBP17.18■□□□□ 0.34
CLDN18-203ENST00000479660 AIDAQ96BJ3 306 aa17.18■□□□□ 0.34
CLDN18-203ENST00000479660 INTS4Q96HW7 963 aaKnown RBP17.18■□□□□ 0.34
CLDN18-203ENST00000479660 BRIP1Q9BX63 1249 aa17.18■□□□□ 0.34
CLDN18-203ENST00000479660 PARP3Q9Y6F1 533 aa17.18■□□□□ 0.34
CLDN18-203ENST00000479660 XDHP47989 1333 aa17.18■□□□□ 0.34
CLDN18-203ENST00000479660 SEMA3EO15041 775 aa17.18■□□□□ 0.34
CLDN18-203ENST00000479660 FGAP02671 866 aa17.18■□□□□ 0.34
CLDN18-203ENST00000479660 SLC15A2Q16348 729 aa17.18■□□□□ 0.34
CLDN18-203ENST00000479660 MSL1Q68DK7 614 aa17.18■□□□□ 0.34
CLDN18-203ENST00000479660 TTLL5Q6EMB2 1281 aa17.18■□□□□ 0.34
CLDN18-203ENST00000479660 SLC51AQ86UW1 340 aa17.18■□□□□ 0.34
CLDN18-203ENST00000479660 CRAMP1Q96RY5 1269 aa17.18■□□□□ 0.34
CLDN18-203ENST00000479660 ANO8Q9HCE9 1232 aaPredicted RBP17.18■□□□□ 0.34
CLDN18-203ENST00000479660 RAB3GAP1Q15042 981 aa17.17■□□□□ 0.34
CLDN18-203ENST00000479660 TXNRD3Q86VQ6 643 aa17.17■□□□□ 0.34
CLDN18-203ENST00000479660 TCEANC2Q96MN5 208 aa17.17■□□□□ 0.34
CLDN18-203ENST00000479660 DOCK2Q92608 1830 aa17.17■□□□□ 0.34
CLDN18-203ENST00000479660 A0A0G2JLW4 131 aa17.16■□□□□ 0.34
CLDN18-203ENST00000479660 STOX1Q6ZVD7 989 aa17.16■□□□□ 0.34
CLDN18-203ENST00000479660 ALDH8A1Q9H2A2 487 aaPredicted RBP17.16■□□□□ 0.34
CLDN18-203ENST00000479660 STK32BQ9NY57 414 aa17.16■□□□□ 0.34
CLDN18-203ENST00000479660 NSFL1CQ9UNZ2 370 aaKnown RBP17.16■□□□□ 0.34
CLDN18-203ENST00000479660 COL1A1P02452 1464 aaPredicted RBP17.16■□□□□ 0.34
CLDN18-203ENST00000479660 SF3B2Q13435 895 aaKnown RBP17.16■□□□□ 0.34
CLDN18-203ENST00000479660 ANKRD1Q15327 319 aa17.16■□□□□ 0.34
CLDN18-203ENST00000479660 IMMTQ16891 758 aaKnown RBP17.16■□□□□ 0.34
CLDN18-203ENST00000479660 ZSCAN31Q96LW9 406 aaPredicted RBP17.16■□□□□ 0.34
CLDN18-203ENST00000479660 STRBPQ96SI9 672 aaKnown RBP17.16■□□□□ 0.34
CLDN18-203ENST00000479660 RAI14Q9P0K7 980 aa17.16■□□□□ 0.34
CLDN18-203ENST00000479660 IRS2Q9Y4H2 1338 aa17.15■□□□□ 0.34
CLDN18-203ENST00000479660 E7EWF7 191 aa17.15■□□□□ 0.34
CLDN18-203ENST00000479660 APPP05067 770 aa17.15■□□□□ 0.34
CLDN18-203ENST00000479660 HMGB1P09429 215 aaKnown RBP17.15■□□□□ 0.34
CLDN18-203ENST00000479660 NUCB2P80303 420 aa17.15■□□□□ 0.34
CLDN18-203ENST00000479660 GPSM2P81274 684 aa17.15■□□□□ 0.34
CLDN18-203ENST00000479660 TNPO1Q92973 898 aaKnown RBP17.14■□□□□ 0.34
CLDN18-203ENST00000479660 SH2B1Q9NRF2 756 aaPredicted RBP17.14■□□□□ 0.34
CLDN18-203ENST00000479660 PDS5AQ29RF7 1337 aaKnown RBP17.14■□□□□ 0.33
CLDN18-203ENST00000479660 MBD4O95243 580 aa17.14■□□□□ 0.33
CLDN18-203ENST00000479660 SRGNP10124 158 aa17.14■□□□□ 0.33
CLDN18-203ENST00000479660 PDE6BP35913 854 aa17.14■□□□□ 0.33
CLDN18-203ENST00000479660 HAND2P61296 217 aa17.14■□□□□ 0.33
CLDN18-203ENST00000479660 TPCN1Q9ULQ1 816 aa17.14■□□□□ 0.33
CLDN18-203ENST00000479660 NRXN2Q9P2S2 1712 aa17.14■□□□□ 0.33
CLDN18-203ENST00000479660 ZNF213O14771 459 aa17.13■□□□□ 0.33
CLDN18-203ENST00000479660 LARGE1O95461 756 aa17.13■□□□□ 0.33
CLDN18-203ENST00000479660 CYP7A1P22680 504 aa17.13■□□□□ 0.33
CLDN18-203ENST00000479660 ATP2B4P23634 1241 aa17.13■□□□□ 0.33
CLDN18-203ENST00000479660 BAG6P46379 1132 aa17.13■□□□□ 0.33
CLDN18-203ENST00000479660 DHX32Q7L7V1 743 aaKnown RBP17.13■□□□□ 0.33
CLDN18-203ENST00000479660 ARMT1Q9H993 441 aa17.13■□□□□ 0.33
CLDN18-203ENST00000479660 GGA1Q9UJY5 639 aa17.13■□□□□ 0.33
CLDN18-203ENST00000479660 PATL2C9JE40 543 aaKnown RBP17.13■□□□□ 0.33
CLDN18-203ENST00000479660 UFL1O94874 794 aa17.13■□□□□ 0.33
CLDN18-203ENST00000479660 CHAF1AQ13111 956 aaPredicted RBP17.13■□□□□ 0.33
CLDN18-203ENST00000479660 TOB2Q14106 344 aaPredicted RBP17.13■□□□□ 0.33
CLDN18-203ENST00000479660 ME3Q16798 604 aa17.13■□□□□ 0.33
CLDN18-203ENST00000479660 TMC4Q7Z404 712 aa17.13■□□□□ 0.33
CLDN18-203ENST00000479660 ZBTB22O15209 634 aa17.12■□□□□ 0.33
CLDN18-203ENST00000479660 NPR1P16066 1061 aa17.12■□□□□ 0.33
CLDN18-203ENST00000479660 Q6ZUG5 572 aa17.12■□□□□ 0.33
CLDN18-203ENST00000479660 C15orf52Q6ZUT6 534 aaKnown RBP17.12■□□□□ 0.33
CLDN18-203ENST00000479660 MIGA1Q8NAN2 632 aa17.12■□□□□ 0.33
CLDN18-203ENST00000479660 PODXL2Q9NZ53 605 aa17.12■□□□□ 0.33
CLDN18-203ENST00000479660 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.12■□□□□ 0.33
CLDN18-203ENST00000479660 ANKRD31Q8N7Z5 1873 aa17.12■□□□□ 0.33
CLDN18-203ENST00000479660 PPEF1O14829 653 aaPredicted RBP17.11■□□□□ 0.33
CLDN18-203ENST00000479660 PKP1Q13835 747 aa17.11■□□□□ 0.33
CLDN18-203ENST00000479660 ZNF804AQ7Z570 1209 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms