RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 EFCC1Q9HA90 598 aa9.78□□□□□ -0.84
HMGCL-205ENST00000479458 UNCXA6NJT0 531 aa9.77□□□□□ -0.85
HMGCL-205ENST00000479458 CT47B1P0C2W7 299 aaPredicted RBP9.77□□□□□ -0.85
HMGCL-205ENST00000479458 ZBTB48P10074 688 aaPredicted RBP9.77□□□□□ -0.85
HMGCL-205ENST00000479458 ARHGEF6Q15052 776 aa9.77□□□□□ -0.85
HMGCL-205ENST00000479458 SF3B3Q15393 1217 aaKnown RBP9.77□□□□□ -0.85
HMGCL-205ENST00000479458 LDLRAD1Q5T700 205 aa9.77□□□□□ -0.85
HMGCL-205ENST00000479458 SPRYD7Q5W111 196 aa9.77□□□□□ -0.85
HMGCL-205ENST00000479458 MRPL50Q8N5N7 158 aaKnown RBP9.77□□□□□ -0.85
HMGCL-205ENST00000479458 LINS1Q8NG48 757 aa9.77□□□□□ -0.85
HMGCL-205ENST00000479458 SSH1Q8WYL5 1049 aa9.77□□□□□ -0.85
HMGCL-205ENST00000479458 JARID2Q92833 1246 aaPredicted RBP9.77□□□□□ -0.85
HMGCL-205ENST00000479458 COL25A1Q9BXS0 654 aaPredicted RBP9.77□□□□□ -0.85
HMGCL-205ENST00000479458 STXBP5LQ9Y2K9 1186 aa9.77□□□□□ -0.85
HMGCL-205ENST00000479458 ASTN2O75129 1339 aaPredicted RBP9.77□□□□□ -0.85
HMGCL-205ENST00000479458 ECE2O60344 883 aa9.76□□□□□ -0.85
HMGCL-205ENST00000479458 NF2P35240 595 aa9.76□□□□□ -0.85
HMGCL-205ENST00000479458 MMP14P50281 582 aa9.76□□□□□ -0.85
HMGCL-205ENST00000479458 ALDH1L2Q3SY69 923 aa9.76□□□□□ -0.85
HMGCL-205ENST00000479458 BEND3Q5T5X7 828 aa9.76□□□□□ -0.85
HMGCL-205ENST00000479458 MOB2Q70IA6 237 aa9.76□□□□□ -0.85
HMGCL-205ENST00000479458 DDX46Q7L014 1031 aaKnown RBP9.76□□□□□ -0.85
HMGCL-205ENST00000479458 EYA3Q99504 573 aa9.76□□□□□ -0.85
HMGCL-205ENST00000479458 DBNDD1Q9H9R9 158 aa9.76□□□□□ -0.85
HMGCL-205ENST00000479458 COL4A1P02462 1669 aa9.75□□□□□ -0.85
HMGCL-205ENST00000479458 H7C1W4 665 aa9.75□□□□□ -0.85
HMGCL-205ENST00000479458 PDE8AO60658 829 aa9.75□□□□□ -0.85
HMGCL-205ENST00000479458 HSP90B1P14625 803 aaKnown RBP9.75□□□□□ -0.85
HMGCL-205ENST00000479458 CASP7P55210 303 aa9.75□□□□□ -0.85
HMGCL-205ENST00000479458 SP3Q02447 781 aa9.75□□□□□ -0.85
HMGCL-205ENST00000479458 GCKRQ14397 625 aa9.75□□□□□ -0.85
HMGCL-205ENST00000479458 MAP3K11Q16584 847 aa9.75□□□□□ -0.85
HMGCL-205ENST00000479458 ARMC9Q7Z3E5 817 aa9.75□□□□□ -0.85
HMGCL-205ENST00000479458 UBE2Q1Q7Z7E8 422 aa9.75□□□□□ -0.85
HMGCL-205ENST00000479458 GMLQ99445 158 aa9.75□□□□□ -0.85
HMGCL-205ENST00000479458 MYH3P11055 1940 aa9.75□□□□□ -0.85
HMGCL-205ENST00000479458 PTPRCP08575 1304 aa9.75□□□□□ -0.85
HMGCL-205ENST00000479458 ZBED9Q6R2W3 1325 aa9.75□□□□□ -0.85
HMGCL-205ENST00000479458 CTSWP56202 376 aa9.74□□□□□ -0.85
HMGCL-205ENST00000479458 PTPN12Q05209 780 aaKnown RBP9.74□□□□□ -0.85
HMGCL-205ENST00000479458 GSE1Q14687 1217 aa9.74□□□□□ -0.85
HMGCL-205ENST00000479458 SLC4A8Q2Y0W8 1093 aa9.74□□□□□ -0.85
HMGCL-205ENST00000479458 SLC9C1Q4G0N8 1177 aa9.74□□□□□ -0.85
HMGCL-205ENST00000479458 OTUD7BQ6GQQ9 843 aa9.74□□□□□ -0.85
HMGCL-205ENST00000479458 RSBN1LQ6PCB5 846 aaPredicted RBP9.74□□□□□ -0.85
HMGCL-205ENST00000479458 UBE3BQ7Z3V4 1068 aa9.74□□□□□ -0.85
HMGCL-205ENST00000479458 CD99L2Q8TCZ2 262 aa9.74□□□□□ -0.85
HMGCL-205ENST00000479458 CELF1Q92879 486 aaKnown RBP9.74□□□□□ -0.85
HMGCL-205ENST00000479458 FAM212AQ96EL1 285 aa9.74□□□□□ -0.85
HMGCL-205ENST00000479458 HTATIP2Q9BUP3 242 aa9.74□□□□□ -0.85
HMGCL-205ENST00000479458 PLA2G12BQ9BX93 195 aa9.74□□□□□ -0.85
HMGCL-205ENST00000479458 MYOZ2Q9NPC6 264 aa9.74□□□□□ -0.85
HMGCL-205ENST00000479458 KCNQ5Q9NR82 932 aa9.74□□□□□ -0.85
HMGCL-205ENST00000479458 SMC4Q9NTJ3 1288 aa9.74□□□□□ -0.85
HMGCL-205ENST00000479458 NR2E3Q9Y5X4 410 aa9.74□□□□□ -0.85
HMGCL-205ENST00000479458 TESPA1A2RU30 521 aaPredicted RBP9.73□□□□□ -0.85
HMGCL-205ENST00000479458 IGF2BP3O00425 579 aaKnown RBP eCLIP9.73□□□□□ -0.85
HMGCL-205ENST00000479458 ALDH1L1O75891 902 aa9.73□□□□□ -0.85
HMGCL-205ENST00000479458 CAPN2P17655 700 aa9.73□□□□□ -0.85
HMGCL-205ENST00000479458 RARSP54136 660 aaKnown RBP9.73□□□□□ -0.85
HMGCL-205ENST00000479458 CCDC152Q4G0S7 254 aa9.73□□□□□ -0.85
HMGCL-205ENST00000479458 NKX2-3Q8TAU0 364 aa9.73□□□□□ -0.85
HMGCL-205ENST00000479458 SEC31BQ9NQW1 1179 aa9.73□□□□□ -0.85
HMGCL-205ENST00000479458 PRDM6Q9NQX0 595 aa9.73□□□□□ -0.85
HMGCL-205ENST00000479458 PODXL2Q9NZ53 605 aa9.73□□□□□ -0.85
HMGCL-205ENST00000479458 POLLQ9UGP5 575 aa9.73□□□□□ -0.85
HMGCL-205ENST00000479458 GRM8O00222 908 aa9.72□□□□□ -0.85
HMGCL-205ENST00000479458 SOX1O00570 391 aaPredicted RBP9.72□□□□□ -0.85
HMGCL-205ENST00000479458 USP17L8P0C7I0 530 aa9.72□□□□□ -0.85
HMGCL-205ENST00000479458 CRHR2Q13324 411 aa9.72□□□□□ -0.85
HMGCL-205ENST00000479458 TTLL12Q14166 644 aaPredicted RBP9.72□□□□□ -0.85
HMGCL-205ENST00000479458 DCAF8Q5TAQ9 597 aa9.72□□□□□ -0.85
HMGCL-205ENST00000479458 POTEHQ6S545 545 aa9.72□□□□□ -0.85
HMGCL-205ENST00000479458 SLC4A10Q6U841 1118 aa9.72□□□□□ -0.85
HMGCL-205ENST00000479458 TTLL11Q8NHH1 800 aa9.72□□□□□ -0.85
HMGCL-205ENST00000479458 DPF3Q92784 378 aa9.72□□□□□ -0.85
HMGCL-205ENST00000479458 CCDC85AQ96PX6 553 aaPredicted RBP9.72□□□□□ -0.85
HMGCL-205ENST00000479458 SRCIN1Q9C0H9 1055 aa9.72□□□□□ -0.85
HMGCL-205ENST00000479458 CIZ1Q9ULV3 898 aaPredicted RBP9.72□□□□□ -0.85
HMGCL-205ENST00000479458 NSFL1CQ9UNZ2 370 aaKnown RBP9.72□□□□□ -0.85
HMGCL-205ENST00000479458 SPTBN5Q9NRC6 3674 aaKnown RBP9.72□□□□□ -0.85
HMGCL-205ENST00000479458 COL1A1P02452 1464 aaPredicted RBP9.72□□□□□ -0.85
HMGCL-205ENST00000479458 C19orf67A6NJJ6 358 aa9.71□□□□□ -0.86
HMGCL-205ENST00000479458 ZBTB7BO15156 539 aaPredicted RBP9.71□□□□□ -0.86
HMGCL-205ENST00000479458 GNRH1P01148 92 aa9.71□□□□□ -0.86
HMGCL-205ENST00000479458 BMP8BP34820 402 aa9.71□□□□□ -0.86
HMGCL-205ENST00000479458 PRMT2P55345 433 aa9.71□□□□□ -0.86
HMGCL-205ENST00000479458 RPS8P62241 208 aaKnown RBP9.71□□□□□ -0.86
HMGCL-205ENST00000479458 CAP1Q01518 475 aa9.71□□□□□ -0.86
HMGCL-205ENST00000479458 MKRN3Q13064 507 aaKnown RBP9.71□□□□□ -0.86
HMGCL-205ENST00000479458 TBC1D16Q8TBP0 767 aa9.71□□□□□ -0.86
HMGCL-205ENST00000479458 LRCH3Q96II8 777 aa9.71□□□□□ -0.86
HMGCL-205ENST00000479458 ZC3H12CQ9C0D7 883 aaKnown RBP9.71□□□□□ -0.86
HMGCL-205ENST00000479458 GREM2Q9H772 168 aa9.71□□□□□ -0.86
HMGCL-205ENST00000479458 PTCH2Q9Y6C5 1203 aa9.71□□□□□ -0.86
HMGCL-205ENST00000479458 MUC3AQ02505 3323 aa9.7□□□□□ -0.86
HMGCL-205ENST00000479458 TTC28Q96AY4 2481 aa9.7□□□□□ -0.86
HMGCL-205ENST00000479458 C6orf229H3BNL8 230 aa9.7□□□□□ -0.86
HMGCL-205ENST00000479458 CSF1RP07333 972 aa9.7□□□□□ -0.86
HMGCL-205ENST00000479458 SHISA4Q96DD7 197 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms