RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 USP17L11C9JVI0 530 aa5.38□□□□□ -1.55
COPS7B-220ENST00000479430 USP17L21D6R901 530 aa5.38□□□□□ -1.55
COPS7B-220ENST00000479430 USP17L18D6R9N7 530 aa5.38□□□□□ -1.55
COPS7B-220ENST00000479430 USP17L22D6RA61 530 aa5.38□□□□□ -1.55
COPS7B-220ENST00000479430 USP17L17D6RBQ6 530 aa5.38□□□□□ -1.55
COPS7B-220ENST00000479430 USP17L19D6RCP7 530 aa5.38□□□□□ -1.55
COPS7B-220ENST00000479430 USP17L20D6RJB6 530 aa5.38□□□□□ -1.55
COPS7B-220ENST00000479430 RNMTO43148 476 aaKnown RBP5.38□□□□□ -1.55
COPS7B-220ENST00000479430 ACTN4O43707 911 aaKnown RBP5.38□□□□□ -1.55
COPS7B-220ENST00000479430 RASA1P20936 1047 aa5.38□□□□□ -1.55
COPS7B-220ENST00000479430 MAP2K1Q02750 393 aaPredicted RBP5.38□□□□□ -1.55
COPS7B-220ENST00000479430 USP17L24Q0WX57 530 aa5.38□□□□□ -1.55
COPS7B-220ENST00000479430 PTK7Q13308 1070 aa5.38□□□□□ -1.55
COPS7B-220ENST00000479430 Q3C1V9 767 aa5.38□□□□□ -1.55
COPS7B-220ENST00000479430 DNAJC14Q6Y2X3 702 aaPredicted RBP5.38□□□□□ -1.55
COPS7B-220ENST00000479430 PLEKHM2Q8IWE5 1019 aa5.38□□□□□ -1.55
COPS7B-220ENST00000479430 PHTF2Q8N3S3 785 aa5.38□□□□□ -1.55
COPS7B-220ENST00000479430 NGEFQ8N5V2 710 aa5.38□□□□□ -1.55
COPS7B-220ENST00000479430 FAM200AQ8TCP9 573 aa5.38□□□□□ -1.55
COPS7B-220ENST00000479430 SLC4A5Q9BY07 1137 aa5.38□□□□□ -1.55
COPS7B-220ENST00000479430 SCAF8Q9UPN6 1271 aaKnown RBP5.38□□□□□ -1.55
COPS7B-220ENST00000479430 VPS9D1Q9Y2B5 631 aa5.38□□□□□ -1.55
COPS7B-220ENST00000479430 ZC3H4Q9UPT8 1303 aaKnown RBP5.38□□□□□ -1.55
COPS7B-220ENST00000479430 FAM196BA6NMK8 535 aa5.37□□□□□ -1.55
COPS7B-220ENST00000479430 CELF2O95319 508 aaKnown RBP5.37□□□□□ -1.55
COPS7B-220ENST00000479430 F12P00748 615 aaPredicted RBP5.37□□□□□ -1.55
COPS7B-220ENST00000479430 SRGNP10124 158 aa5.37□□□□□ -1.55
COPS7B-220ENST00000479430 PDE6BP35913 854 aa5.37□□□□□ -1.55
COPS7B-220ENST00000479430 KCNH2Q12809 1159 aa5.37□□□□□ -1.55
COPS7B-220ENST00000479430 NCOA4Q13772 614 aa5.37□□□□□ -1.55
COPS7B-220ENST00000479430 KMT5BQ4FZB7 885 aa5.37□□□□□ -1.55
COPS7B-220ENST00000479430 LHX8Q68G74 356 aa5.37□□□□□ -1.55
COPS7B-220ENST00000479430 BRICD5Q6PL45 260 aa5.37□□□□□ -1.55
COPS7B-220ENST00000479430 CNBD1Q8NA66 436 aa5.37□□□□□ -1.55
COPS7B-220ENST00000479430 C7orf43Q8WVR3 580 aa5.37□□□□□ -1.55
COPS7B-220ENST00000479430 ZNF496Q96IT1 587 aaPredicted RBP5.37□□□□□ -1.55
COPS7B-220ENST00000479430 USB1Q9BQ65 265 aaKnown RBP5.37□□□□□ -1.55
COPS7B-220ENST00000479430 SLC52A2Q9HAB3 445 aa5.37□□□□□ -1.55
COPS7B-220ENST00000479430 IQCA1LA6NCM1 817 aa5.36□□□□□ -1.55
COPS7B-220ENST00000479430 CAMTA2O94983 1202 aa5.36□□□□□ -1.55
COPS7B-220ENST00000479430 HSP90AB1P08238 724 aaKnown RBP5.36□□□□□ -1.55
COPS7B-220ENST00000479430 CTHP32929 405 aa5.36□□□□□ -1.55
COPS7B-220ENST00000479430 IARSP41252 1262 aaKnown RBP5.36□□□□□ -1.55
COPS7B-220ENST00000479430 SERPINB4P48594 390 aa5.36□□□□□ -1.55
COPS7B-220ENST00000479430 SCNN1DP51172 638 aa5.36□□□□□ -1.55
COPS7B-220ENST00000479430 EIF5P55010 431 aaKnown RBP5.36□□□□□ -1.55
COPS7B-220ENST00000479430 HLFQ16534 295 aa5.36□□□□□ -1.55
COPS7B-220ENST00000479430 MTHFSDQ2M296 383 aaKnown RBP5.36□□□□□ -1.55
COPS7B-220ENST00000479430 MASTLQ96GX5 879 aa5.36□□□□□ -1.55
COPS7B-220ENST00000479430 ZFRQ96KR1 1074 aaKnown RBP5.36□□□□□ -1.55
COPS7B-220ENST00000479430 OCSTAMPQ9BR26 566 aa5.36□□□□□ -1.55
COPS7B-220ENST00000479430 BRIP1Q9BX63 1249 aa5.36□□□□□ -1.55
COPS7B-220ENST00000479430 SCUBE2Q9NQ36 999 aa5.36□□□□□ -1.55
COPS7B-220ENST00000479430 KIAA1522Q9P206 1035 aaPredicted RBP5.36□□□□□ -1.55
COPS7B-220ENST00000479430 USP16Q9Y5T5 823 aa5.36□□□□□ -1.55
COPS7B-220ENST00000479430 PAPPA2Q9BXP8 1791 aa5.36□□□□□ -1.55
COPS7B-220ENST00000479430 DLG5Q8TDM6 1919 aa5.35□□□□□ -1.55
COPS7B-220ENST00000479430 KIF24Q5T7B8 1368 aa5.35□□□□□ -1.55
COPS7B-220ENST00000479430 LTBP3Q9NS15 1303 aa5.35□□□□□ -1.55
COPS7B-220ENST00000479430 SOWAHDA6NJG2 315 aa5.35□□□□□ -1.55
COPS7B-220ENST00000479430 BHMG1C9JSJ3 638 aaPredicted RBP5.35□□□□□ -1.55
COPS7B-220ENST00000479430 TRPA1O75762 1119 aa5.35□□□□□ -1.55
COPS7B-220ENST00000479430 HMGB2P26583 209 aaKnown RBP5.35□□□□□ -1.55
COPS7B-220ENST00000479430 HIRAP54198 1017 aaPredicted RBP5.35□□□□□ -1.55
COPS7B-220ENST00000479430 ST5P78524 1137 aa5.35□□□□□ -1.55
COPS7B-220ENST00000479430 FKBP4Q02790 459 aaKnown RBP eCLIP5.35□□□□□ -1.55
COPS7B-220ENST00000479430 SLFNL1Q499Z3 407 aa5.35□□□□□ -1.55
COPS7B-220ENST00000479430 CCDC93Q567U6 631 aa5.35□□□□□ -1.55
COPS7B-220ENST00000479430 STYK1Q6J9G0 422 aa5.35□□□□□ -1.55
COPS7B-220ENST00000479430 USP48Q86UV5 1035 aa5.35□□□□□ -1.55
COPS7B-220ENST00000479430 NBPF5PQ86XG9 351 aaPredicted RBP5.35□□□□□ -1.55
COPS7B-220ENST00000479430 DZIP3Q86Y13 1208 aaKnown RBP5.35□□□□□ -1.55
COPS7B-220ENST00000479430 ANKMY2Q8IV38 441 aa5.35□□□□□ -1.55
COPS7B-220ENST00000479430 SCUBE3Q8IX30 993 aa5.35□□□□□ -1.55
COPS7B-220ENST00000479430 TRPM4Q8TD43 1214 aa5.35□□□□□ -1.55
COPS7B-220ENST00000479430 CNKSR1Q969H4 720 aa5.35□□□□□ -1.55
COPS7B-220ENST00000479430 MRRFQ96E11 262 aaKnown RBP5.35□□□□□ -1.55
COPS7B-220ENST00000479430 PUS7Q96PZ0 661 aaKnown RBP5.35□□□□□ -1.55
COPS7B-220ENST00000479430 SETDB2Q96T68 719 aa5.35□□□□□ -1.55
COPS7B-220ENST00000479430 IGSF5Q9NSI5 407 aa5.35□□□□□ -1.55
COPS7B-220ENST00000479430 TLL2Q9Y6L7 1015 aa5.35□□□□□ -1.55
COPS7B-220ENST00000479430 SCN9AQ15858 1988 aa5.35□□□□□ -1.55
COPS7B-220ENST00000479430 COL4A1P02462 1669 aa5.34□□□□□ -1.55
COPS7B-220ENST00000479430 MKI67P46013 3256 aaKnown RBP5.34□□□□□ -1.55
COPS7B-220ENST00000479430 ABCC12Q96J65 1359 aa5.34□□□□□ -1.55
COPS7B-220ENST00000479430 ASTN2O75129 1339 aaPredicted RBP5.34□□□□□ -1.55
COPS7B-220ENST00000479430 FZD9O00144 591 aa5.34□□□□□ -1.55
COPS7B-220ENST00000479430 SNPHO15079 494 aa5.34□□□□□ -1.55
COPS7B-220ENST00000479430 IL13P35225 146 aa5.34□□□□□ -1.55
COPS7B-220ENST00000479430 DPYDQ12882 1025 aa5.34□□□□□ -1.55
COPS7B-220ENST00000479430 AOC3Q16853 763 aa5.34□□□□□ -1.55
COPS7B-220ENST00000479430 AKAP4Q5JQC9 854 aa5.34□□□□□ -1.55
COPS7B-220ENST00000479430 VARS2Q5ST30 1063 aaKnown RBP5.34□□□□□ -1.55
COPS7B-220ENST00000479430 SAPCD2Q86UD0 394 aa5.34□□□□□ -1.55
COPS7B-220ENST00000479430 LAPTM4BQ86VI4 370 aa5.34□□□□□ -1.55
COPS7B-220ENST00000479430 RNF135Q8IUD6 432 aa5.34□□□□□ -1.55
COPS7B-220ENST00000479430 OGFOD1Q8N543 542 aa5.34□□□□□ -1.55
COPS7B-220ENST00000479430 PLPP7Q8NBV4 271 aa5.34□□□□□ -1.55
COPS7B-220ENST00000479430 CLP1Q92989 425 aaKnown RBP5.34□□□□□ -1.55
COPS7B-220ENST00000479430 THAP11Q96EK4 314 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms