RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 SUPT20HL1Q3ZLR7 823 aa18.56■□□□□ 0.56
USP11-207ENST00000478596 BABAM1Q9NWV8 329 aa18.56■□□□□ 0.56
USP11-207ENST00000478596 ZBED9Q6R2W3 1325 aa18.55■□□□□ 0.56
USP11-207ENST00000478596 CCDC27Q2M243 656 aa18.55■□□□□ 0.56
USP11-207ENST00000478596 WWC1Q8IX03 1113 aa18.55■□□□□ 0.56
USP11-207ENST00000478596 ANKRD13AQ8IZ07 590 aa18.55■□□□□ 0.56
USP11-207ENST00000478596 TRIM35Q9UPQ4 493 aa18.55■□□□□ 0.56
USP11-207ENST00000478596 ZNF646O15015 1829 aaPredicted RBP18.55■□□□□ 0.56
USP11-207ENST00000478596 GJA8P48165 433 aa18.54■□□□□ 0.56
USP11-207ENST00000478596 MTFR1Q15390 333 aa18.54■□□□□ 0.56
USP11-207ENST00000478596 TAF1CQ15572 869 aaPredicted RBP18.54■□□□□ 0.56
USP11-207ENST00000478596 CCDC152Q4G0S7 254 aa18.54■□□□□ 0.56
USP11-207ENST00000478596 COA1Q9GZY4 146 aa18.54■□□□□ 0.56
USP11-207ENST00000478596 ZNF804BA4D1E1 1349 aa18.53■□□□□ 0.56
USP11-207ENST00000478596 USP2O75604 605 aaPredicted RBP18.53■□□□□ 0.56
USP11-207ENST00000478596 KIAA0825Q8IV33 1275 aa18.53■□□□□ 0.56
USP11-207ENST00000478596 ZBTB38Q8NAP3 1195 aaPredicted RBP18.53■□□□□ 0.56
USP11-207ENST00000478596 BRI3BPQ8WY22 251 aa18.53■□□□□ 0.56
USP11-207ENST00000478596 FBXW7Q969H0 707 aa18.53■□□□□ 0.56
USP11-207ENST00000478596 GJB1P08034 283 aa18.52■□□□□ 0.56
USP11-207ENST00000478596 LACTBP83111 547 aaPredicted RBP18.52■□□□□ 0.56
USP11-207ENST00000478596 KIF22Q14807 665 aa18.52■□□□□ 0.56
USP11-207ENST00000478596 ANKRD18AQ8IVF6 992 aa18.52■□□□□ 0.56
USP11-207ENST00000478596 DEFB123Q8N688 67 aa18.52■□□□□ 0.56
USP11-207ENST00000478596 MTMR14Q8NCE2 650 aa18.52■□□□□ 0.56
USP11-207ENST00000478596 OPTNQ96CV9 577 aa18.52■□□□□ 0.56
USP11-207ENST00000478596 ARHGAP39Q9C0H5 1083 aa18.52■□□□□ 0.56
USP11-207ENST00000478596 VCANP13611 3396 aa18.51■□□□□ 0.55
USP11-207ENST00000478596 NCBP3Q53F19 620 aaKnown RBP18.51■□□□□ 0.55
USP11-207ENST00000478596 NBPF12Q5TAG4 269 aaPredicted RBP18.51■□□□□ 0.55
USP11-207ENST00000478596 TTLL5Q6EMB2 1281 aa18.51■□□□□ 0.55
USP11-207ENST00000478596 CHPF2Q9P2E5 772 aa18.51■□□□□ 0.55
USP11-207ENST00000478596 TLR2O60603 784 aa18.5■□□□□ 0.55
USP11-207ENST00000478596 GNAI1P63096 354 aa18.5■□□□□ 0.55
USP11-207ENST00000478596 GOLGA2Q08379 1002 aa18.5■□□□□ 0.55
USP11-207ENST00000478596 DLGAP5Q15398 846 aa18.5■□□□□ 0.55
USP11-207ENST00000478596 FAM43AQ8N2R8 423 aa18.5■□□□□ 0.55
USP11-207ENST00000478596 MYH16Q9H6N6 1097 aa18.5■□□□□ 0.55
USP11-207ENST00000478596 CCL15-CCL14A0A0B4J2E2 113 aa18.49■□□□□ 0.55
USP11-207ENST00000478596 GTF2A2P52657 109 aa18.49■□□□□ 0.55
USP11-207ENST00000478596 CCL15Q16663 113 aa18.49■□□□□ 0.55
USP11-207ENST00000478596 WDR63Q8IWG1 891 aa18.49■□□□□ 0.55
USP11-207ENST00000478596 ELP3Q9H9T3 547 aa18.49■□□□□ 0.55
USP11-207ENST00000478596 IFT57Q9NWB7 429 aa18.49■□□□□ 0.55
USP11-207ENST00000478596 STAP2Q9UGK3 403 aa18.49■□□□□ 0.55
USP11-207ENST00000478596 PDE8AO60658 829 aa18.48■□□□□ 0.55
USP11-207ENST00000478596 WDHD1O75717 1129 aaPredicted RBP18.48■□□□□ 0.55
USP11-207ENST00000478596 ZCCHC17Q9NP64 241 aaKnown RBP18.48■□□□□ 0.55
USP11-207ENST00000478596 IL16Q14005 1332 aa18.48■□□□□ 0.55
USP11-207ENST00000478596 SPTBN5Q9NRC6 3674 aaKnown RBP18.47■□□□□ 0.55
USP11-207ENST00000478596 EVI5O60447 810 aa18.47■□□□□ 0.55
USP11-207ENST00000478596 FARP2O94887 1054 aaPredicted RBP18.47■□□□□ 0.55
USP11-207ENST00000478596 CCL5P13501 91 aa18.47■□□□□ 0.55
USP11-207ENST00000478596 BMP8BP34820 402 aa18.47■□□□□ 0.55
USP11-207ENST00000478596 CCT4P50991 539 aaKnown RBP18.47■□□□□ 0.55
USP11-207ENST00000478596 TXNRD3Q86VQ6 643 aa18.47■□□□□ 0.55
USP11-207ENST00000478596 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.47■□□□□ 0.55
USP11-207ENST00000478596 BSDC1Q9NW68 430 aaPredicted RBP18.47■□□□□ 0.55
USP11-207ENST00000478596 MTMR10Q9NXD2 777 aa18.47■□□□□ 0.55
USP11-207ENST00000478596 MINPP1Q9UNW1 487 aa18.47■□□□□ 0.55
USP11-207ENST00000478596 E9PSI1 815 aa18.46■□□□□ 0.55
USP11-207ENST00000478596 MYO1BO43795 1136 aa18.46■□□□□ 0.55
USP11-207ENST00000478596 GRK4P32298 578 aa18.46■□□□□ 0.55
USP11-207ENST00000478596 Q7L0L9 218 aa18.46■□□□□ 0.55
USP11-207ENST00000478596 CDC5LQ99459 802 aaKnown RBP18.46■□□□□ 0.55
USP11-207ENST00000478596 DBF4Q9UBU7 674 aaPredicted RBP18.46■□□□□ 0.55
USP11-207ENST00000478596 SRRDQ9UH36 339 aa18.46■□□□□ 0.55
USP11-207ENST00000478596 ZNF521Q96K83 1311 aa18.46■□□□□ 0.55
USP11-207ENST00000478596 SPDYE2BA6NHP3 402 aa18.45■□□□□ 0.54
USP11-207ENST00000478596 PCCAP05165 728 aaPredicted RBP18.45■□□□□ 0.54
USP11-207ENST00000478596 SPDYE6P0CI01 402 aa18.45■□□□□ 0.54
USP11-207ENST00000478596 GTF2IP78347 998 aa18.45■□□□□ 0.54
USP11-207ENST00000478596 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.45■□□□□ 0.54
USP11-207ENST00000478596 HELBQ8NG08 1087 aaPredicted RBP18.45■□□□□ 0.54
USP11-207ENST00000478596 U2AF1L4Q8WU68 220 aaKnown RBP18.45■□□□□ 0.54
USP11-207ENST00000478596 TSR2Q969E8 191 aaKnown RBP18.45■□□□□ 0.54
USP11-207ENST00000478596 CCDC85AQ96PX6 553 aaPredicted RBP18.45■□□□□ 0.54
USP11-207ENST00000478596 RNF208Q9H0X6 261 aa18.45■□□□□ 0.54
USP11-207ENST00000478596 RIPOR2Q9Y4F9 1068 aa18.45■□□□□ 0.54
USP11-207ENST00000478596 CLRN2A0PK11 232 aa18.44■□□□□ 0.54
USP11-207ENST00000478596 RASA3Q14644 834 aa18.44■□□□□ 0.54
USP11-207ENST00000478596 LRIT3Q3SXY7 679 aa18.44■□□□□ 0.54
USP11-207ENST00000478596 CNKSR2Q8WXI2 1034 aa18.44■□□□□ 0.54
USP11-207ENST00000478596 GDF15Q99988 308 aa18.44■□□□□ 0.54
USP11-207ENST00000478596 LEMD3Q9Y2U8 911 aa18.44■□□□□ 0.54
USP11-207ENST00000478596 FANCIQ9NVI1 1328 aa18.44■□□□□ 0.54
USP11-207ENST00000478596 CAPN2P17655 700 aa18.43■□□□□ 0.54
USP11-207ENST00000478596 HDGFL1Q5TGJ6 251 aa18.43■□□□□ 0.54
USP11-207ENST00000478596 PRMT6Q96LA8 375 aaPredicted RBP18.43■□□□□ 0.54
USP11-207ENST00000478596 VEZTQ9HBM0 779 aa18.43■□□□□ 0.54
USP11-207ENST00000478596 PRDM6Q9NQX0 595 aa18.43■□□□□ 0.54
USP11-207ENST00000478596 MBIPQ9NS73 344 aa18.43■□□□□ 0.54
USP11-207ENST00000478596 HYPKQ9NX55 129 aa18.43■□□□□ 0.54
USP11-207ENST00000478596 PCDHAC2Q9Y5I4 1007 aa18.43■□□□□ 0.54
USP11-207ENST00000478596 ZSWIM8A7E2V4 1837 aa18.42■□□□□ 0.54
USP11-207ENST00000478596 HOXB7P09629 217 aa18.42■□□□□ 0.54
USP11-207ENST00000478596 HOXD10P28358 340 aa18.42■□□□□ 0.54
USP11-207ENST00000478596 CTGFP29279 349 aa18.42■□□□□ 0.54
USP11-207ENST00000478596 VGLL4Q14135 290 aa18.42■□□□□ 0.54
USP11-207ENST00000478596 KRT24Q2M2I5 525 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms