RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 FAM26DQ5JW98 314 aa7.82□□□□□ -1.16
NCKAP1-204ENST00000477988 SMG8Q8ND04 991 aaKnown RBP7.82□□□□□ -1.16
NCKAP1-204ENST00000477988 SUGCTQ9HAC7 445 aa7.82□□□□□ -1.16
NCKAP1-204ENST00000477988 NOVA2Q9UNW9 492 aaKnown RBP7.82□□□□□ -1.16
NCKAP1-204ENST00000477988 FAM177BA6PVY3 158 aa7.81□□□□□ -1.16
NCKAP1-204ENST00000477988 CYP2E1P05181 493 aaPredicted RBP7.81□□□□□ -1.16
NCKAP1-204ENST00000477988 CABP4P57796 275 aa7.81□□□□□ -1.16
NCKAP1-204ENST00000477988 NFKBIBQ15653 356 aa7.81□□□□□ -1.16
NCKAP1-204ENST00000477988 PAOXQ6QHF9 649 aa7.81□□□□□ -1.16
NCKAP1-204ENST00000477988 ZAR1Q86SH2 424 aa7.81□□□□□ -1.16
NCKAP1-204ENST00000477988 PRIMPOLQ96LW4 560 aa7.81□□□□□ -1.16
NCKAP1-204ENST00000477988 SAP130Q9H0E3 1048 aa7.81□□□□□ -1.16
NCKAP1-204ENST00000477988 OCLNQ16625 522 aa7.8□□□□□ -1.16
NCKAP1-204ENST00000477988 TNFRSF10BO14763 440 aa7.79□□□□□ -1.16
NCKAP1-204ENST00000477988 FARP2O94887 1054 aaPredicted RBP7.79□□□□□ -1.16
NCKAP1-204ENST00000477988 ELOAQ14241 798 aaKnown RBP7.79□□□□□ -1.16
NCKAP1-204ENST00000477988 NUTM2GQ5VZR2 741 aa7.79□□□□□ -1.16
NCKAP1-204ENST00000477988 C12orf50Q8NA57 414 aaPredicted RBP7.79□□□□□ -1.16
NCKAP1-204ENST00000477988 GATA6Q92908 595 aa7.79□□□□□ -1.16
NCKAP1-204ENST00000477988 ABI2Q9NYB9 513 aaPredicted RBP7.79□□□□□ -1.16
NCKAP1-204ENST00000477988 PRKAG2Q9UGJ0 569 aa7.79□□□□□ -1.16
NCKAP1-204ENST00000477988 NFKBIEO00221 500 aa7.78□□□□□ -1.16
NCKAP1-204ENST00000477988 PRMT3O60678 531 aa7.78□□□□□ -1.16
NCKAP1-204ENST00000477988 ZAP70P43403 619 aa7.78□□□□□ -1.16
NCKAP1-204ENST00000477988 HGSNATQ68CP4 663 aa7.78□□□□□ -1.16
NCKAP1-204ENST00000477988 CDPF1Q6NVV7 123 aa7.78□□□□□ -1.16
NCKAP1-204ENST00000477988 NCAPG2Q86XI2 1143 aa7.78□□□□□ -1.16
NCKAP1-204ENST00000477988 FBLIM1Q8WUP2 373 aa7.78□□□□□ -1.16
NCKAP1-204ENST00000477988 EZH1Q92800 747 aaPredicted RBP7.78□□□□□ -1.16
NCKAP1-204ENST00000477988 TBC1D32Q96NH3 1257 aa7.78□□□□□ -1.16
NCKAP1-204ENST00000477988 ZC3H7BQ9UGR2 993 aaKnown RBP7.78□□□□□ -1.16
NCKAP1-204ENST00000477988 FAM170BA6NMN3 283 aa7.77□□□□□ -1.17
NCKAP1-204ENST00000477988 BIN1O00499 593 aa7.77□□□□□ -1.17
NCKAP1-204ENST00000477988 KRTAP19-4Q3LI73 84 aa7.77□□□□□ -1.17
NCKAP1-204ENST00000477988 WFDC3Q8IUB2 231 aa7.77□□□□□ -1.17
NCKAP1-204ENST00000477988 SLC7A3Q8WY07 619 aa7.77□□□□□ -1.17
NCKAP1-204ENST00000477988 CYP4F12Q9HCS2 524 aa7.77□□□□□ -1.17
NCKAP1-204ENST00000477988 FAM69CQ0P6D2 419 aa7.76□□□□□ -1.17
NCKAP1-204ENST00000477988 C19orf57Q0VDD7 668 aa7.76□□□□□ -1.17
NCKAP1-204ENST00000477988 PDE12Q6L8Q7 609 aaKnown RBP7.76□□□□□ -1.17
NCKAP1-204ENST00000477988 STIM2Q9P246 746 aa7.76□□□□□ -1.17
NCKAP1-204ENST00000477988 SOX13Q9UN79 622 aa7.76□□□□□ -1.17
NCKAP1-204ENST00000477988 ARL4DP49703 201 aa7.75□□□□□ -1.17
NCKAP1-204ENST00000477988 ZNF792Q3KQV3 632 aa7.75□□□□□ -1.17
NCKAP1-204ENST00000477988 CDCA8Q53HL2 280 aa7.75□□□□□ -1.17
NCKAP1-204ENST00000477988 ABTB2Q8N961 1025 aa7.75□□□□□ -1.17
NCKAP1-204ENST00000477988 CXXC1Q9P0U4 656 aaPredicted RBP7.75□□□□□ -1.17
NCKAP1-204ENST00000477988 LOC100289279A0A1B0GTE1 492 aa7.74□□□□□ -1.17
NCKAP1-204ENST00000477988 DLGAP3O95886 979 aa7.74□□□□□ -1.17
NCKAP1-204ENST00000477988 PRKCSHP14314 528 aaPredicted RBP7.74□□□□□ -1.17
NCKAP1-204ENST00000477988 DRD2P14416 443 aa7.74□□□□□ -1.17
NCKAP1-204ENST00000477988 USP11P51784 963 aa7.74□□□□□ -1.17
NCKAP1-204ENST00000477988 PKN1Q16512 942 aa7.74□□□□□ -1.17
NCKAP1-204ENST00000477988 C2CD4AQ8NCU7 369 aaPredicted RBP7.74□□□□□ -1.17
NCKAP1-204ENST00000477988 GPR152Q8TDT2 470 aa7.74□□□□□ -1.17
NCKAP1-204ENST00000477988 BCL7CQ8WUZ0 217 aaPredicted RBP7.74□□□□□ -1.17
NCKAP1-204ENST00000477988 SALL4Q9UJQ4 1053 aa7.74□□□□□ -1.17
NCKAP1-204ENST00000477988 RPLP1P05386 114 aaKnown RBP7.73□□□□□ -1.17
NCKAP1-204ENST00000477988 ACPPP15309 386 aa7.73□□□□□ -1.17
NCKAP1-204ENST00000477988 ATG4DQ86TL0 474 aaPredicted RBP7.73□□□□□ -1.17
NCKAP1-204ENST00000477988 ELP3Q9H9T3 547 aa7.73□□□□□ -1.17
NCKAP1-204ENST00000477988 DZANK1Q9NVP4 752 aa7.73□□□□□ -1.17
NCKAP1-204ENST00000477988 ZMIZ1Q9ULJ6 1067 aa7.73□□□□□ -1.17
NCKAP1-204ENST00000477988 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.73□□□□□ -1.17
NCKAP1-204ENST00000477988 SOX1O00570 391 aaPredicted RBP7.72□□□□□ -1.17
NCKAP1-204ENST00000477988 TMEM132AQ24JP5 1023 aa7.72□□□□□ -1.17
NCKAP1-204ENST00000477988 EXOSC6Q5RKV6 272 aaKnown RBP7.72□□□□□ -1.17
NCKAP1-204ENST00000477988 DUSP27Q5VZP5 1158 aa7.72□□□□□ -1.17
NCKAP1-204ENST00000477988 SLC5A6Q9Y289 635 aa7.72□□□□□ -1.17
NCKAP1-204ENST00000477988 PDE2AO00408 941 aaPredicted RBP7.71□□□□□ -1.18
NCKAP1-204ENST00000477988 NAA30Q147X3 362 aaPredicted RBP7.71□□□□□ -1.18
NCKAP1-204ENST00000477988 PLCL1Q15111 1095 aa7.71□□□□□ -1.18
NCKAP1-204ENST00000477988 XKR5Q6UX68 686 aa7.71□□□□□ -1.18
NCKAP1-204ENST00000477988 ZNF574Q6ZN55 896 aaPredicted RBP7.71□□□□□ -1.18
NCKAP1-204ENST00000477988 SPRED2Q7Z698 418 aa7.71□□□□□ -1.18
NCKAP1-204ENST00000477988 CILP2Q8IUL8 1156 aa7.71□□□□□ -1.18
NCKAP1-204ENST00000477988 KSR1Q8IVT5 923 aa7.71□□□□□ -1.18
NCKAP1-204ENST00000477988 GLIS3Q8NEA6 775 aa7.71□□□□□ -1.18
NCKAP1-204ENST00000477988 TMEM40Q8WWA1 233 aa7.71□□□□□ -1.18
NCKAP1-204ENST00000477988 MKNK1Q9BUB5 465 aa7.71□□□□□ -1.18
NCKAP1-204ENST00000477988 TMEM63CQ9P1W3 806 aa7.71□□□□□ -1.18
NCKAP1-204ENST00000477988 KANSL3Q9P2N6 904 aa7.71□□□□□ -1.18
NCKAP1-204ENST00000477988 ZBTB39O15060 712 aa7.7□□□□□ -1.18
NCKAP1-204ENST00000477988 ZNF865P0CJ78 1059 aaPredicted RBP7.7□□□□□ -1.18
NCKAP1-204ENST00000477988 CYP27A1Q02318 531 aa7.7□□□□□ -1.18
NCKAP1-204ENST00000477988 SOX4Q06945 474 aaPredicted RBP7.7□□□□□ -1.18
NCKAP1-204ENST00000477988 CAPN12Q6ZSI9 719 aa7.7□□□□□ -1.18
NCKAP1-204ENST00000477988 FAM168AQ92567 244 aa7.7□□□□□ -1.18
NCKAP1-204ENST00000477988 YIPF2Q9BWQ6 316 aa7.7□□□□□ -1.18
NCKAP1-204ENST00000477988 LRRC4CQ9HCJ2 640 aa7.7□□□□□ -1.18
NCKAP1-204ENST00000477988 CNTN3Q9P232 1028 aa7.7□□□□□ -1.18
NCKAP1-204ENST00000477988 MESP2Q0VG99 397 aa7.69□□□□□ -1.18
NCKAP1-204ENST00000477988 ZNF765Q7L2R6 523 aa7.69□□□□□ -1.18
NCKAP1-204ENST00000477988 ZNF438Q7Z4V0 828 aa7.69□□□□□ -1.18
NCKAP1-204ENST00000477988 VN1R5Q7Z5H4 357 aa7.69□□□□□ -1.18
NCKAP1-204ENST00000477988 PMEPA1Q969W9 287 aa7.69□□□□□ -1.18
NCKAP1-204ENST00000477988 HHIPQ96QV1 700 aa7.69□□□□□ -1.18
NCKAP1-204ENST00000477988 USP26Q9BXU7 913 aa7.69□□□□□ -1.18
NCKAP1-204ENST00000477988 SOX17Q9H6I2 414 aaPredicted RBP7.69□□□□□ -1.18
NCKAP1-204ENST00000477988 TRPA1O75762 1119 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms