RNA–Protein interactions for RNA: ENST00000477794.2

PRKCD-204, Transcript of protein kinase C delta, humanhuman

TSL 3

Gene PRKCD, Length 404 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-204ENST00000477794 MTMR14Q8NCE2 650 aa23.67■■□□□ 1.38
PRKCD-204ENST00000477794 ZBED3Q96IU2 234 aaPredicted RBP23.67■■□□□ 1.38
PRKCD-204ENST00000477794 ZBTB48P10074 688 aaPredicted RBP23.66■■□□□ 1.38
PRKCD-204ENST00000477794 FKBP1AP62942 108 aaKnown RBP23.66■■□□□ 1.38
PRKCD-204ENST00000477794 PRPF38BQ5VTL8 546 aaKnown RBP23.66■■□□□ 1.38
PRKCD-204ENST00000477794 FANCIQ9NVI1 1328 aa23.65■■□□□ 1.38
PRKCD-204ENST00000477794 CCDC57Q2TAC2 916 aa23.65■■□□□ 1.38
PRKCD-204ENST00000477794 OTUD7BQ6GQQ9 843 aa23.64■■□□□ 1.37
PRKCD-204ENST00000477794 WDR63Q8IWG1 891 aa23.64■■□□□ 1.37
PRKCD-204ENST00000477794 IL1R1P14778 569 aa23.63■■□□□ 1.37
PRKCD-204ENST00000477794 IREB2P48200 963 aaKnown RBP23.63■■□□□ 1.37
PRKCD-204ENST00000477794 MAP3K11Q16584 847 aa23.63■■□□□ 1.37
PRKCD-204ENST00000477794 TAF5LO75529 589 aa23.62■■□□□ 1.37
PRKCD-204ENST00000477794 RBM5P52756 815 aaKnown RBP eCLIP23.62■■□□□ 1.37
PRKCD-204ENST00000477794 TNFAIP1Q13829 316 aa23.62■■□□□ 1.37
PRKCD-204ENST00000477794 HELBQ8NG08 1087 aaPredicted RBP23.62■■□□□ 1.37
PRKCD-204ENST00000477794 SPDYE2BA6NHP3 402 aa23.61■■□□□ 1.37
PRKCD-204ENST00000477794 F8W031 263 aaPredicted RBP23.61■■□□□ 1.37
PRKCD-204ENST00000477794 SPDYE6P0CI01 402 aa23.61■■□□□ 1.37
PRKCD-204ENST00000477794 CFAP100Q494V2 611 aa23.61■■□□□ 1.37
PRKCD-204ENST00000477794 LDHAL6AQ6ZMR3 332 aa23.61■■□□□ 1.37
PRKCD-204ENST00000477794 VEZTQ9HBM0 779 aa23.61■■□□□ 1.37
PRKCD-204ENST00000477794 CNNM1Q9NRU3 951 aa23.61■■□□□ 1.37
PRKCD-204ENST00000477794 CACNA1FO60840 1977 aa23.6■■□□□ 1.37
PRKCD-204ENST00000477794 VAMP4O75379 141 aa23.6■■□□□ 1.37
PRKCD-204ENST00000477794 FOXO4P98177 505 aa23.6■■□□□ 1.37
PRKCD-204ENST00000477794 LMBR1LQ6UX01 489 aa23.6■■□□□ 1.37
PRKCD-204ENST00000477794 IFNL1Q8IU54 200 aa23.6■■□□□ 1.37
PRKCD-204ENST00000477794 CERS5Q8N5B7 392 aa23.6■■□□□ 1.37
PRKCD-204ENST00000477794 MRS2Q9HD23 443 aa23.6■■□□□ 1.37
PRKCD-204ENST00000477794 C9orf78Q9NZ63 289 aaPredicted RBP23.6■■□□□ 1.37
PRKCD-204ENST00000477794 ZNF646O15015 1829 aaPredicted RBP23.59■■□□□ 1.37
PRKCD-204ENST00000477794 GRM8O00222 908 aa23.59■■□□□ 1.37
PRKCD-204ENST00000477794 WNK4Q96J92 1243 aa23.59■■□□□ 1.37
PRKCD-204ENST00000477794 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.59■■□□□ 1.37
PRKCD-204ENST00000477794 CLRN2A0PK11 232 aa23.58■■□□□ 1.37
PRKCD-204ENST00000477794 BEND3Q5T5X7 828 aa23.58■■□□□ 1.37
PRKCD-204ENST00000477794 INTS3Q68E01 1043 aaKnown RBP23.58■■□□□ 1.37
PRKCD-204ENST00000477794 IRS2Q9Y4H2 1338 aa23.58■■□□□ 1.36
PRKCD-204ENST00000477794 PLIN1O60240 522 aa23.57■■□□□ 1.36
PRKCD-204ENST00000477794 EXOSC9Q06265 439 aaKnown RBP23.57■■□□□ 1.36
PRKCD-204ENST00000477794 ANKRD13AQ8IZ07 590 aa23.57■■□□□ 1.36
PRKCD-204ENST00000477794 ERO1AQ96HE7 468 aa23.57■■□□□ 1.36
PRKCD-204ENST00000477794 F6X3S4 739 aa23.56■■□□□ 1.36
PRKCD-204ENST00000477794 SNAP23O00161 211 aa23.56■■□□□ 1.36
PRKCD-204ENST00000477794 CCDC184Q52MB2 194 aa23.56■■□□□ 1.36
PRKCD-204ENST00000477794 PRMT6Q96LA8 375 aaPredicted RBP23.56■■□□□ 1.36
PRKCD-204ENST00000477794 TRIM17Q9Y577 477 aa23.56■■□□□ 1.36
PRKCD-204ENST00000477794 ALDH1L1O75891 902 aa23.55■■□□□ 1.36
PRKCD-204ENST00000477794 UBE4AQ14139 1066 aa23.55■■□□□ 1.36
PRKCD-204ENST00000477794 RASA3Q14644 834 aa23.55■■□□□ 1.36
PRKCD-204ENST00000477794 CLMNQ96JQ2 1002 aa23.55■■□□□ 1.36
PRKCD-204ENST00000477794 SERPINA10Q9UK55 444 aa23.55■■□□□ 1.36
PRKCD-204ENST00000477794 FAM205AQ6ZU69 1335 aa23.55■■□□□ 1.36
PRKCD-204ENST00000477794 HIBADHP31937 336 aaKnown RBP23.54■■□□□ 1.36
PRKCD-204ENST00000477794 ARHGEF6Q15052 776 aa23.54■■□□□ 1.36
PRKCD-204ENST00000477794 MFSD14BQ5SR56 506 aa23.54■■□□□ 1.36
PRKCD-204ENST00000477794 FZD1Q9UP38 647 aa23.54■■□□□ 1.36
PRKCD-204ENST00000477794 SALL2Q9Y467 1007 aaPredicted RBP23.54■■□□□ 1.36
PRKCD-204ENST00000477794 TNNI2P48788 182 aa23.53■■□□□ 1.36
PRKCD-204ENST00000477794 NBPF12Q5TAG4 269 aaPredicted RBP23.53■■□□□ 1.36
PRKCD-204ENST00000477794 VPS37DQ86XT2 251 aa23.53■■□□□ 1.36
PRKCD-204ENST00000477794 GCC1Q96CN9 775 aa23.53■■□□□ 1.36
PRKCD-204ENST00000477794 SRCIN1Q9C0H9 1055 aa23.53■■□□□ 1.36
PRKCD-204ENST00000477794 R3HDMLQ9H3Y0 253 aa23.53■■□□□ 1.36
PRKCD-204ENST00000477794 TTF2Q9UNY4 1162 aaKnown RBP23.53■■□□□ 1.36
PRKCD-204ENST00000477794 ANP32CO43423 234 aa23.52■■□□□ 1.36
PRKCD-204ENST00000477794 WDHD1O75717 1129 aaPredicted RBP23.52■■□□□ 1.36
PRKCD-204ENST00000477794 JAG2Q9Y219 1238 aa23.52■■□□□ 1.36
PRKCD-204ENST00000477794 SSC5DA1L4H1 1573 aa23.52■■□□□ 1.36
PRKCD-204ENST00000477794 IGF2BP3O00425 579 aaKnown RBP eCLIP23.51■■□□□ 1.35
PRKCD-204ENST00000477794 SPDYE2Q495Y8 402 aa23.51■■□□□ 1.35
PRKCD-204ENST00000477794 SLC4A10Q6U841 1118 aa23.51■■□□□ 1.35
PRKCD-204ENST00000477794 OTOP1Q7RTM1 612 aa23.51■■□□□ 1.35
PRKCD-204ENST00000477794 TDRD7Q8NHU6 1098 aaKnown RBP23.51■■□□□ 1.35
PRKCD-204ENST00000477794 ZNF594Q96JF6 807 aaPredicted RBP23.51■■□□□ 1.35
PRKCD-204ENST00000477794 ECM29Q5VYK3 1845 aa23.5■■□□□ 1.35
PRKCD-204ENST00000477794 USP2O75604 605 aaPredicted RBP23.5■■□□□ 1.35
PRKCD-204ENST00000477794 ZNF70Q9UC06 446 aaPredicted RBP23.5■■□□□ 1.35
PRKCD-204ENST00000477794 PCDHAC2Q9Y5I4 1007 aa23.5■■□□□ 1.35
PRKCD-204ENST00000477794 MROH5Q6ZUA9 1318 aa23.5■■□□□ 1.35
PRKCD-204ENST00000477794 FRAT2O75474 233 aaPredicted RBP23.49■■□□□ 1.35
PRKCD-204ENST00000477794 CRHR2Q13324 411 aa23.49■■□□□ 1.35
PRKCD-204ENST00000477794 EPHA10Q5JZY3 1008 aa23.49■■□□□ 1.35
PRKCD-204ENST00000477794 TBC1D22AQ8WUA7 517 aa23.49■■□□□ 1.35
PRKCD-204ENST00000477794 EFCC1Q9HA90 598 aa23.49■■□□□ 1.35
PRKCD-204ENST00000477794 SP3Q02447 781 aa23.48■■□□□ 1.35
PRKCD-204ENST00000477794 CAVIN4Q5BKX8 364 aa23.48■■□□□ 1.35
PRKCD-204ENST00000477794 DZIP1LQ8IYY4 767 aaKnown RBP23.48■■□□□ 1.35
PRKCD-204ENST00000477794 CSADQ9Y600 493 aa23.48■■□□□ 1.35
PRKCD-204ENST00000477794 GYG1P46976 350 aa23.47■■□□□ 1.35
PRKCD-204ENST00000477794 OPTNQ96CV9 577 aa23.47■■□□□ 1.35
PRKCD-204ENST00000477794 HOOK2Q96ED9 719 aa23.47■■□□□ 1.35
PRKCD-204ENST00000477794 TDRD3Q9H7E2 651 aaKnown RBP23.47■■□□□ 1.35
PRKCD-204ENST00000477794 TMOD2Q9NZR1 351 aa23.47■■□□□ 1.35
PRKCD-204ENST00000477794 TESPA1A2RU30 521 aaPredicted RBP23.46■■□□□ 1.35
PRKCD-204ENST00000477794 GTF2A2P52657 109 aa23.46■■□□□ 1.35
PRKCD-204ENST00000477794 FAM84BQ96KN1 310 aaPredicted RBP23.46■■□□□ 1.35
PRKCD-204ENST00000477794 ELP3Q9H9T3 547 aa23.46■■□□□ 1.35
PRKCD-204ENST00000477794 PTPN22Q9Y2R2 807 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms