RNA–Protein interactions for RNA: ENST00000477054.6

GSDMB-208, Transcript of gasdermin B, human

TSL 5

Gene GSDMB, Length 4,655 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMB-208	ENST00000477054	SKIL	P12757	684 aa		11.2	□□□□□ -0.62
GSDMB-208	ENST00000477054	ATP2B2	Q01814	1243 aa		11.2	□□□□□ -0.62
GSDMB-208	ENST00000477054	SNW1	Q13573	536 aa	Known RBP	11.2	□□□□□ -0.62
GSDMB-208	ENST00000477054	ANKRD18A	Q8IVF6	992 aa		11.2	□□□□□ -0.62
GSDMB-208	ENST00000477054	ZNF397	Q8NF99	534 aa	Predicted RBP	11.2	□□□□□ -0.62
GSDMB-208	ENST00000477054	CCDC43	Q96MW1	224 aa	Known RBP	11.2	□□□□□ -0.62
GSDMB-208	ENST00000477054	RASSF4	Q9H2L5	321 aa		11.2	□□□□□ -0.62
GSDMB-208	ENST00000477054	COPRS	Q9NQ92	184 aa		11.2	□□□□□ -0.62
GSDMB-208	ENST00000477054	ANKIB1	Q9P2G1	1089 aa		11.2	□□□□□ -0.62
GSDMB-208	ENST00000477054	USP31	Q70CQ4	1352 aa		11.19	□□□□□ -0.62
GSDMB-208	ENST00000477054		H0YHG0	523 aa		11.19	□□□□□ -0.62
GSDMB-208	ENST00000477054	NAA16	Q6N069	864 aa	Predicted RBP	11.19	□□□□□ -0.62
GSDMB-208	ENST00000477054	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.19	□□□□□ -0.62
GSDMB-208	ENST00000477054	ZNF594	Q96JF6	807 aa	Predicted RBP	11.19	□□□□□ -0.62
GSDMB-208	ENST00000477054	SEC63	Q9UGP8	760 aa	Known RBP	11.19	□□□□□ -0.62
GSDMB-208	ENST00000477054	MROH2A	A6NES4	1674 aa		11.19	□□□□□ -0.62
GSDMB-208	ENST00000477054	CCDC194	A0A1B0GVG4	234 aa		11.19	□□□□□ -0.62
GSDMB-208	ENST00000477054	ATP6V1A	P38606	617 aa		11.19	□□□□□ -0.62
GSDMB-208	ENST00000477054	FAM173B	Q6P4H8	233 aa		11.19	□□□□□ -0.62
GSDMB-208	ENST00000477054	GOLGA6L9	A6NEM1	432 aa		11.19	□□□□□ -0.62
GSDMB-208	ENST00000477054	EIF3J	O75822	258 aa	Known RBP	11.19	□□□□□ -0.62
GSDMB-208	ENST00000477054	MARCKS	P29966	332 aa	Predicted RBP	11.19	□□□□□ -0.62
GSDMB-208	ENST00000477054	ISM2	Q6H9L7	571 aa		11.19	□□□□□ -0.62
GSDMB-208	ENST00000477054	RASEF	Q8IZ41	740 aa		11.19	□□□□□ -0.62
GSDMB-208	ENST00000477054	GTF3C6	Q969F1	213 aa		11.19	□□□□□ -0.62
GSDMB-208	ENST00000477054	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.19	□□□□□ -0.62
GSDMB-208	ENST00000477054	BCL2L12	Q9HB09	334 aa		11.19	□□□□□ -0.62
GSDMB-208	ENST00000477054	MTMR6	Q9Y217	621 aa		11.19	□□□□□ -0.62
GSDMB-208	ENST00000477054	PTGS1	P23219	599 aa		11.18	□□□□□ -0.62
GSDMB-208	ENST00000477054	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.18	□□□□□ -0.62
GSDMB-208	ENST00000477054	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.18	□□□□□ -0.62
GSDMB-208	ENST00000477054	MAP4K1	Q92918	833 aa		11.18	□□□□□ -0.62
GSDMB-208	ENST00000477054	LUC7L	Q9NQ29	371 aa	Known RBP	11.18	□□□□□ -0.62
GSDMB-208	ENST00000477054	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.18	□□□□□ -0.62
GSDMB-208	ENST00000477054	NDUFB9	Q9Y6M9	179 aa		11.18	□□□□□ -0.62
GSDMB-208	ENST00000477054	ITGA6	P23229	1130 aa		11.18	□□□□□ -0.62
GSDMB-208	ENST00000477054	URI1	O94763	535 aa	Predicted RBP	11.18	□□□□□ -0.62
GSDMB-208	ENST00000477054	EIF5	P55010	431 aa	Known RBP	11.18	□□□□□ -0.62
GSDMB-208	ENST00000477054	UBASH3A	P57075	661 aa		11.18	□□□□□ -0.62
GSDMB-208	ENST00000477054	EDC3	Q96F86	508 aa	Known RBP	11.18	□□□□□ -0.62
GSDMB-208	ENST00000477054	HAUS7	Q99871	368 aa		11.18	□□□□□ -0.62
GSDMB-208	ENST00000477054	TPCN1	Q9ULQ1	816 aa		11.18	□□□□□ -0.62
GSDMB-208	ENST00000477054	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
GSDMB-208	ENST00000477054	PPL	O60437	1756 aa		11.18	□□□□□ -0.62
GSDMB-208	ENST00000477054	TSPY2	A6NKD2	308 aa		11.18	□□□□□ -0.62
GSDMB-208	ENST00000477054	POLR3G	O15318	223 aa	Predicted RBP	11.18	□□□□□ -0.62
GSDMB-208	ENST00000477054	CASQ1	P31415	396 aa		11.18	□□□□□ -0.62
GSDMB-208	ENST00000477054	MAGEB6	Q8N7X4	407 aa		11.18	□□□□□ -0.62
GSDMB-208	ENST00000477054	SMARCC1	Q92922	1105 aa	Predicted RBP	11.18	□□□□□ -0.62
GSDMB-208	ENST00000477054	ADGRL3	Q9HAR2	1447 aa		11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	CLTC	Q00610	1675 aa	Known RBP	11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	NPHP4	O75161	1426 aa	Predicted RBP	11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	NCAPD2	Q15021	1401 aa		11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	KIF5C	O60282	957 aa		11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	LDHC	P07864	332 aa		11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	PIP4K2B	P78356	416 aa		11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	IFIT1B	Q5T764	474 aa	Known RBP	11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	PI4K2B	Q8TCG2	481 aa		11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	TMEM87B	Q96K49	555 aa		11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	RERE	Q9P2R6	1566 aa		11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	AGL	P35573	1532 aa		11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	RIOK3	O14730	519 aa	Known RBP	11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	HELB	Q8NG08	1087 aa	Predicted RBP	11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	KAT14	Q9H8E8	782 aa		11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	USP32	Q8NFA0	1604 aa		11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	RTL9	Q8NET4	1388 aa		11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	GPAA1	O43292	621 aa		11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	JAK2	O60674	1132 aa		11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	DDB1	Q16531	1140 aa		11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	NCOA5	Q9HCD5	579 aa	Known RBP	11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	PRDM4	Q9UKN5	801 aa		11.17	□□□□□ -0.62
GSDMB-208	ENST00000477054	BAG3	O95817	575 aa		11.16	□□□□□ -0.62
GSDMB-208	ENST00000477054	HMGB2	P26583	209 aa	Known RBP	11.16	□□□□□ -0.62
GSDMB-208	ENST00000477054	PUM3	Q15397	648 aa	Known RBP	11.16	□□□□□ -0.62
GSDMB-208	ENST00000477054	SLF2	Q8IX21	1173 aa		11.16	□□□□□ -0.62
GSDMB-208	ENST00000477054	TANGO6	Q9C0B7	1094 aa		11.16	□□□□□ -0.62
GSDMB-208	ENST00000477054	MAGEB6P1	A0A0J9YX57	407 aa		11.16	□□□□□ -0.62
GSDMB-208	ENST00000477054		E7EWF7	191 aa		11.16	□□□□□ -0.62
GSDMB-208	ENST00000477054	PDE8A	O60658	829 aa		11.16	□□□□□ -0.62
GSDMB-208	ENST00000477054	DDX17	Q92841	729 aa	Known RBP	11.16	□□□□□ -0.62
GSDMB-208	ENST00000477054	TUBB4A	P04350	444 aa		11.16	□□□□□ -0.62
GSDMB-208	ENST00000477054	TCIRG1	Q13488	830 aa		11.16	□□□□□ -0.62
GSDMB-208	ENST00000477054	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.16	□□□□□ -0.62
GSDMB-208	ENST00000477054	ANGEL1	Q9UNK9	670 aa	Known RBP	11.16	□□□□□ -0.62
GSDMB-208	ENST00000477054	CRB1	P82279	1406 aa		11.16	□□□□□ -0.62
GSDMB-208	ENST00000477054	CALM1	P0DP23	149 aa		11.15	□□□□□ -0.62
GSDMB-208	ENST00000477054	CALM2	P0DP24	149 aa		11.15	□□□□□ -0.62
GSDMB-208	ENST00000477054	CALM3	P0DP25	149 aa		11.15	□□□□□ -0.62
GSDMB-208	ENST00000477054	ADCK5	Q3MIX3	580 aa		11.15	□□□□□ -0.62
GSDMB-208	ENST00000477054	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.15	□□□□□ -0.62
GSDMB-208	ENST00000477054	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.15	□□□□□ -0.62
GSDMB-208	ENST00000477054	ERBB3	P21860	1342 aa		11.15	□□□□□ -0.62
GSDMB-208	ENST00000477054		A0A1B0GVL5	298 aa		11.15	□□□□□ -0.62
GSDMB-208	ENST00000477054	IQCE	Q6IPM2	695 aa		11.15	□□□□□ -0.62
GSDMB-208	ENST00000477054	KIAA1328	Q86T90	577 aa		11.15	□□□□□ -0.62
GSDMB-208	ENST00000477054	CBX8	Q9HC52	389 aa		11.15	□□□□□ -0.62
GSDMB-208	ENST00000477054	PATL2	C9JE40	543 aa	Known RBP	11.15	□□□□□ -0.62
GSDMB-208	ENST00000477054	TAF5L	O75529	589 aa		11.15	□□□□□ -0.62
GSDMB-208	ENST00000477054	MBD4	O95243	580 aa		11.15	□□□□□ -0.62
GSDMB-208	ENST00000477054	HSPA2	P54652	639 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms