RNA–Protein interactions for RNA: ENST00000476824.1

ITGA4-208, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,004 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-208ENST00000476824 CD68P34810 354 aaPredicted RBP6.52□□□□□ -1.37
ITGA4-208ENST00000476824 IREB2P48200 963 aaKnown RBP6.52□□□□□ -1.37
ITGA4-208ENST00000476824 CABP4P57796 275 aa6.52□□□□□ -1.37
ITGA4-208ENST00000476824 FAM117BQ6P1L5 589 aa6.52□□□□□ -1.37
ITGA4-208ENST00000476824 IGF2-ASQ6U949 168 aa6.52□□□□□ -1.37
ITGA4-208ENST00000476824 ZSCAN29Q8IWY8 852 aaPredicted RBP6.52□□□□□ -1.37
ITGA4-208ENST00000476824 FOXD4L4Q8WXT5 416 aaPredicted RBP6.52□□□□□ -1.37
ITGA4-208ENST00000476824 GZF1Q9H116 711 aaPredicted RBP6.52□□□□□ -1.37
ITGA4-208ENST00000476824 P4HBP07237 508 aaKnown RBP6.51□□□□□ -1.37
ITGA4-208ENST00000476824 FURINP09958 794 aa6.51□□□□□ -1.37
ITGA4-208ENST00000476824 NLRP12P59046 1061 aa6.51□□□□□ -1.37
ITGA4-208ENST00000476824 FMR1Q06787 632 aaKnown RBP eCLIP6.51□□□□□ -1.37
ITGA4-208ENST00000476824 IKBKEQ14164 716 aa6.51□□□□□ -1.37
ITGA4-208ENST00000476824 GRM2Q14416 872 aa6.51□□□□□ -1.37
ITGA4-208ENST00000476824 ENOX2Q16206 610 aaKnown RBP6.51□□□□□ -1.37
ITGA4-208ENST00000476824 TXNRD3Q86VQ6 643 aa6.51□□□□□ -1.37
ITGA4-208ENST00000476824 MAP4K3Q8IVH8 894 aa6.51□□□□□ -1.37
ITGA4-208ENST00000476824 UBASH3BQ8TF42 649 aa6.51□□□□□ -1.37
ITGA4-208ENST00000476824 WFDC12Q8WWY7 111 aa6.51□□□□□ -1.37
ITGA4-208ENST00000476824 SRA1Q9HD15 236 aaKnown RBP6.51□□□□□ -1.37
ITGA4-208ENST00000476824 SEC31BQ9NQW1 1179 aa6.51□□□□□ -1.37
ITGA4-208ENST00000476824 TPSG1Q9NRR2 321 aa6.51□□□□□ -1.37
ITGA4-208ENST00000476824 F8W735 103 aaPredicted RBP6.5□□□□□ -1.37
ITGA4-208ENST00000476824 ESRRAP11474 423 aaPredicted RBP6.5□□□□□ -1.37
ITGA4-208ENST00000476824 PIP4K2BP78356 416 aa6.5□□□□□ -1.37
ITGA4-208ENST00000476824 NRG1Q02297 640 aaPredicted RBP6.5□□□□□ -1.37
ITGA4-208ENST00000476824 ZNF423Q2M1K9 1284 aa6.5□□□□□ -1.37
ITGA4-208ENST00000476824 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.5□□□□□ -1.37
ITGA4-208ENST00000476824 GLIS3Q8NEA6 775 aa6.5□□□□□ -1.37
ITGA4-208ENST00000476824 MRPL18Q9H0U6 180 aaKnown RBP6.5□□□□□ -1.37
ITGA4-208ENST00000476824 ABCB6Q9NP58 842 aa6.5□□□□□ -1.37
ITGA4-208ENST00000476824 ACAD11Q709F0 780 aa6.49□□□□□ -1.37
ITGA4-208ENST00000476824 KLHL23Q8NBE8 558 aa6.49□□□□□ -1.37
ITGA4-208ENST00000476824 MEGF10Q96KG7 1140 aa6.49□□□□□ -1.37
ITGA4-208ENST00000476824 AKTIPQ9H8T0 292 aa6.49□□□□□ -1.37
ITGA4-208ENST00000476824 ANKRD33BA6NCL7 494 aa6.48□□□□□ -1.37
ITGA4-208ENST00000476824 PCDH1Q08174 1060 aa6.48□□□□□ -1.37
ITGA4-208ENST00000476824 C19orf57Q0VDD7 668 aa6.48□□□□□ -1.37
ITGA4-208ENST00000476824 SUZ12Q15022 739 aaKnown RBP6.48□□□□□ -1.37
ITGA4-208ENST00000476824 DUOXA2Q1HG44 320 aa6.48□□□□□ -1.37
ITGA4-208ENST00000476824 KIAA1211Q6ZU35 1233 aa6.48□□□□□ -1.37
ITGA4-208ENST00000476824 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.48□□□□□ -1.37
ITGA4-208ENST00000476824 BCO2Q9BYV7 579 aa6.48□□□□□ -1.37
ITGA4-208ENST00000476824 OSGEPQ9NPF4 335 aa6.48□□□□□ -1.37
ITGA4-208ENST00000476824 NLRP2Q9NX02 1062 aa6.48□□□□□ -1.37
ITGA4-208ENST00000476824 TMEM238LA0A1B0GVL6 79 aa6.47□□□□□ -1.37
ITGA4-208ENST00000476824 FCGRTP55899 365 aa6.47□□□□□ -1.37
ITGA4-208ENST00000476824 GSTM4Q03013 218 aa6.47□□□□□ -1.37
ITGA4-208ENST00000476824 PRPF40BQ6NWY9 871 aaKnown RBP6.47□□□□□ -1.37
ITGA4-208ENST00000476824 NXPE4Q6UWF7 544 aa6.47□□□□□ -1.37
ITGA4-208ENST00000476824 TMEM130Q8N3G9 435 aa6.47□□□□□ -1.37
ITGA4-208ENST00000476824 WNT8BQ93098 351 aa6.47□□□□□ -1.37
ITGA4-208ENST00000476824 SSBP4Q9BWG4 385 aaPredicted RBP6.47□□□□□ -1.37
ITGA4-208ENST00000476824 CLEC4MQ9H2X3 399 aaPredicted RBP6.47□□□□□ -1.37
ITGA4-208ENST00000476824 ZNF576Q9H609 170 aa6.47□□□□□ -1.37
ITGA4-208ENST00000476824 RNF19AQ9NV58 838 aa6.47□□□□□ -1.37
ITGA4-208ENST00000476824 DLGAP3O95886 979 aa6.46□□□□□ -1.38
ITGA4-208ENST00000476824 ITPKAP23677 461 aa6.46□□□□□ -1.38
ITGA4-208ENST00000476824 ZNF157P51786 506 aaPredicted RBP6.46□□□□□ -1.38
ITGA4-208ENST00000476824 FAAP100Q0VG06 881 aa6.46□□□□□ -1.38
ITGA4-208ENST00000476824 DNAJC14Q6Y2X3 702 aaPredicted RBP6.46□□□□□ -1.38
ITGA4-208ENST00000476824 HOMEZQ8IX15 550 aa6.46□□□□□ -1.38
ITGA4-208ENST00000476824 TP53INP1Q96A56 240 aa6.46□□□□□ -1.38
ITGA4-208ENST00000476824 USP26Q9BXU7 913 aa6.46□□□□□ -1.38
ITGA4-208ENST00000476824 GLB1P16278 677 aa6.45□□□□□ -1.38
ITGA4-208ENST00000476824 ARL4DP49703 201 aa6.45□□□□□ -1.38
ITGA4-208ENST00000476824 RSPO4Q2I0M5 234 aaPredicted RBP6.45□□□□□ -1.38
ITGA4-208ENST00000476824 DCAF11Q8TEB1 546 aa6.45□□□□□ -1.38
ITGA4-208ENST00000476824 UBL7Q96S82 380 aaPredicted RBP6.45□□□□□ -1.38
ITGA4-208ENST00000476824 OSBPL7Q9BZF2 842 aa6.45□□□□□ -1.38
ITGA4-208ENST00000476824 LOC100289279A0A1B0GTE1 492 aa6.44□□□□□ -1.38
ITGA4-208ENST00000476824 ECEL1O95672 775 aa6.44□□□□□ -1.38
ITGA4-208ENST00000476824 LDHBP07195 334 aaKnown RBP6.44□□□□□ -1.38
ITGA4-208ENST00000476824 CTSBP07858 339 aa6.44□□□□□ -1.38
ITGA4-208ENST00000476824 NKAPLQ5M9Q1 402 aa6.44□□□□□ -1.38
ITGA4-208ENST00000476824 DTHD1Q6ZMT9 781 aa6.44□□□□□ -1.38
ITGA4-208ENST00000476824 NPAS4Q8IUM7 802 aa6.44□□□□□ -1.38
ITGA4-208ENST00000476824 TRIM56Q9BRZ2 755 aaKnown RBP6.44□□□□□ -1.38
ITGA4-208ENST00000476824 NRSN2Q9GZP1 204 aa6.44□□□□□ -1.38
ITGA4-208ENST00000476824 TRAK1Q9UPV9 953 aa6.44□□□□□ -1.38
ITGA4-208ENST00000476824 B3GALT4O96024 378 aa6.43□□□□□ -1.38
ITGA4-208ENST00000476824 ITGB7P26010 798 aa6.43□□□□□ -1.38
ITGA4-208ENST00000476824 ALG1LQ6GMV1 187 aa6.43□□□□□ -1.38
ITGA4-208ENST00000476824 Q6ZS46 218 aa6.43□□□□□ -1.38
ITGA4-208ENST00000476824 DZIP1LQ8IYY4 767 aaKnown RBP6.43□□□□□ -1.38
ITGA4-208ENST00000476824 RUSC1Q9BVN2 902 aa6.43□□□□□ -1.38
ITGA4-208ENST00000476824 SEMA6BQ9H3T3 888 aa6.43□□□□□ -1.38
ITGA4-208ENST00000476824 SOX17Q9H6I2 414 aaPredicted RBP6.43□□□□□ -1.38
ITGA4-208ENST00000476824 AKAP2Q9Y2D5 859 aa6.43□□□□□ -1.38
ITGA4-208ENST00000476824 K7ELQ4 463 aaPredicted RBP6.42□□□□□ -1.38
ITGA4-208ENST00000476824 ADAM23O75077 832 aa6.42□□□□□ -1.38
ITGA4-208ENST00000476824 MAOBP27338 520 aa6.42□□□□□ -1.38
ITGA4-208ENST00000476824 ATP2B2Q01814 1243 aa6.42□□□□□ -1.38
ITGA4-208ENST00000476824 TAGLNQ01995 201 aaKnown RBP6.42□□□□□ -1.38
ITGA4-208ENST00000476824 CCDC27Q2M243 656 aa6.42□□□□□ -1.38
ITGA4-208ENST00000476824 C3orf58Q8NDZ4 430 aa6.42□□□□□ -1.38
ITGA4-208ENST00000476824 FBF1Q8TES7 1133 aa6.42□□□□□ -1.38
ITGA4-208ENST00000476824 DYRK3O43781 588 aa6.41□□□□□ -1.38
ITGA4-208ENST00000476824 PTPN12Q05209 780 aaKnown RBP6.41□□□□□ -1.38
ITGA4-208ENST00000476824 EAPPQ56P03 285 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms