RNA–Protein interactions for RNA: ENST00000476068.1

C1GALT1-207, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best)

Gene C1GALT1, Length 1,186 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-207ENST00000476068 UNCXA6NJT0 531 aa16.51■□□□□ 0.23
C1GALT1-207ENST00000476068 USP2O75604 605 aaPredicted RBP16.51■□□□□ 0.23
C1GALT1-207ENST00000476068 IREB2P48200 963 aaKnown RBP16.51■□□□□ 0.23
C1GALT1-207ENST00000476068 DUSP27Q5VZP5 1158 aa16.51■□□□□ 0.23
C1GALT1-207ENST00000476068 OPTNQ96CV9 577 aa16.51■□□□□ 0.23
C1GALT1-207ENST00000476068 SHISA4Q96DD7 197 aa16.51■□□□□ 0.23
C1GALT1-207ENST00000476068 MS4A4AQ96JQ5 239 aa16.51■□□□□ 0.23
C1GALT1-207ENST00000476068 GREM2Q9H772 168 aa16.51■□□□□ 0.23
C1GALT1-207ENST00000476068 A0A0C4DFX4 3053 aa16.51■□□□□ 0.23
C1GALT1-207ENST00000476068 ARHGEF6Q15052 776 aa16.5■□□□□ 0.23
C1GALT1-207ENST00000476068 TAF1CQ15572 869 aaPredicted RBP16.5■□□□□ 0.23
C1GALT1-207ENST00000476068 SUPT20HL1Q3ZLR7 823 aa16.5■□□□□ 0.23
C1GALT1-207ENST00000476068 ANKRD13AQ8IZ07 590 aa16.5■□□□□ 0.23
C1GALT1-207ENST00000476068 CERS5Q8N5B7 392 aa16.5■□□□□ 0.23
C1GALT1-207ENST00000476068 DPF3Q92784 378 aa16.5■□□□□ 0.23
C1GALT1-207ENST00000476068 ELP3Q9H9T3 547 aa16.5■□□□□ 0.23
C1GALT1-207ENST00000476068 MTMR14Q8NCE2 650 aa16.49■□□□□ 0.23
C1GALT1-207ENST00000476068 TTLL11Q8NHH1 800 aa16.49■□□□□ 0.23
C1GALT1-207ENST00000476068 CNKSR2Q8WXI2 1034 aa16.49■□□□□ 0.23
C1GALT1-207ENST00000476068 BRI3BPQ8WY22 251 aa16.49■□□□□ 0.23
C1GALT1-207ENST00000476068 ARHGAP39Q9C0H5 1083 aa16.49■□□□□ 0.23
C1GALT1-207ENST00000476068 PRO3102Q9H379 93 aa16.49■□□□□ 0.23
C1GALT1-207ENST00000476068 VEZTQ9HBM0 779 aa16.49■□□□□ 0.23
C1GALT1-207ENST00000476068 ZFYVE28Q9HCC9 887 aa16.49■□□□□ 0.23
C1GALT1-207ENST00000476068 LEMD3Q9Y2U8 911 aa16.49■□□□□ 0.23
C1GALT1-207ENST00000476068 FAM43AQ8N2R8 423 aa16.48■□□□□ 0.23
C1GALT1-207ENST00000476068 TRIM35Q9UPQ4 493 aa16.48■□□□□ 0.23
C1GALT1-207ENST00000476068 A0A1B0GUL6 1792 aa16.48■□□□□ 0.23
C1GALT1-207ENST00000476068 CCL15-CCL14A0A0B4J2E2 113 aa16.47■□□□□ 0.23
C1GALT1-207ENST00000476068 SPDYE2BA6NHP3 402 aa16.47■□□□□ 0.23
C1GALT1-207ENST00000476068 F8W031 263 aaPredicted RBP16.47■□□□□ 0.23
C1GALT1-207ENST00000476068 SPDYE6P0CI01 402 aa16.47■□□□□ 0.23
C1GALT1-207ENST00000476068 CCL15Q16663 113 aa16.47■□□□□ 0.23
C1GALT1-207ENST00000476068 CFAP100Q494V2 611 aa16.47■□□□□ 0.23
C1GALT1-207ENST00000476068 CCDC146Q8IYE0 955 aa16.47■□□□□ 0.23
C1GALT1-207ENST00000476068 PRMT6Q96LA8 375 aaPredicted RBP16.47■□□□□ 0.23
C1GALT1-207ENST00000476068 METTL22Q9BUU2 404 aaPredicted RBP16.47■□□□□ 0.23
C1GALT1-207ENST00000476068 MYO1BO43795 1136 aa16.46■□□□□ 0.23
C1GALT1-207ENST00000476068 RASA3Q14644 834 aa16.46■□□□□ 0.23
C1GALT1-207ENST00000476068 MTFR1Q15390 333 aa16.46■□□□□ 0.23
C1GALT1-207ENST00000476068 CD209Q9NNX6 404 aa16.46■□□□□ 0.23
C1GALT1-207ENST00000476068 LAMA3Q16787 3333 aa16.46■□□□□ 0.23
C1GALT1-207ENST00000476068 ARAP2Q8WZ64 1704 aa16.45■□□□□ 0.22
C1GALT1-207ENST00000476068 SOX1O00570 391 aaPredicted RBP16.45■□□□□ 0.22
C1GALT1-207ENST00000476068 ECM2O94769 699 aaPredicted RBP16.44■□□□□ 0.22
C1GALT1-207ENST00000476068 IGHMBP2P38935 993 aaKnown RBP16.44■□□□□ 0.22
C1GALT1-207ENST00000476068 GTF2A2P52657 109 aa16.44■□□□□ 0.22
C1GALT1-207ENST00000476068 LACTBP83111 547 aaPredicted RBP16.44■□□□□ 0.22
C1GALT1-207ENST00000476068 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.44■□□□□ 0.22
C1GALT1-207ENST00000476068 CDAN1Q8IWY9 1227 aa16.44■□□□□ 0.22
C1GALT1-207ENST00000476068 MBIPQ9NS73 344 aa16.44■□□□□ 0.22
C1GALT1-207ENST00000476068 SNAP23O00161 211 aa16.43■□□□□ 0.22
C1GALT1-207ENST00000476068 IGKV5-2P06315 115 aa16.43■□□□□ 0.22
C1GALT1-207ENST00000476068 KCNJ4P48050 445 aa16.43■□□□□ 0.22
C1GALT1-207ENST00000476068 VGLL4Q14135 290 aa16.43■□□□□ 0.22
C1GALT1-207ENST00000476068 UBE2Q1Q7Z7E8 422 aa16.43■□□□□ 0.22
C1GALT1-207ENST00000476068 LRCH3Q96II8 777 aa16.43■□□□□ 0.22
C1GALT1-207ENST00000476068 ANKRD2Q9GZV1 360 aa16.43■□□□□ 0.22
C1GALT1-207ENST00000476068 MAP3K2Q9Y2U5 619 aa16.43■□□□□ 0.22
C1GALT1-207ENST00000476068 IRS2Q9Y4H2 1338 aa16.43■□□□□ 0.22
C1GALT1-207ENST00000476068 ELL2O00472 640 aaPredicted RBP16.42■□□□□ 0.22
C1GALT1-207ENST00000476068 TLR2O60603 784 aa16.42■□□□□ 0.22
C1GALT1-207ENST00000476068 RBM5P52756 815 aaKnown RBP eCLIP16.42■□□□□ 0.22
C1GALT1-207ENST00000476068 KIF22Q14807 665 aa16.42■□□□□ 0.22
C1GALT1-207ENST00000476068 HTATIP2Q9BUP3 242 aa16.42■□□□□ 0.22
C1GALT1-207ENST00000476068 JAG2Q9Y219 1238 aa16.42■□□□□ 0.22
C1GALT1-207ENST00000476068 MNX1P50219 401 aaPredicted RBP16.41■□□□□ 0.22
C1GALT1-207ENST00000476068 CHRNDQ07001 517 aa16.41■□□□□ 0.22
C1GALT1-207ENST00000476068 ZBTB7BO15156 539 aaPredicted RBP16.4■□□□□ 0.22
C1GALT1-207ENST00000476068 DDX58O95786 925 aaKnown RBP16.4■□□□□ 0.22
C1GALT1-207ENST00000476068 ITGA6P23229 1130 aa16.4■□□□□ 0.22
C1GALT1-207ENST00000476068 CTGFP29279 349 aa16.4■□□□□ 0.22
C1GALT1-207ENST00000476068 TEPSINQ96N21 525 aa16.4■□□□□ 0.22
C1GALT1-207ENST00000476068 MPHOSPH8Q99549 860 aa16.4■□□□□ 0.22
C1GALT1-207ENST00000476068 GNRH1P01148 92 aa16.39■□□□□ 0.21
C1GALT1-207ENST00000476068 GJA8P48165 433 aa16.39■□□□□ 0.21
C1GALT1-207ENST00000476068 PRMT2P55345 433 aa16.39■□□□□ 0.21
C1GALT1-207ENST00000476068 MAP3K9P80192 1104 aa16.39■□□□□ 0.21
C1GALT1-207ENST00000476068 TNFAIP1Q13829 316 aa16.39■□□□□ 0.21
C1GALT1-207ENST00000476068 CWF19L2Q2TBE0 894 aaKnown RBP16.39■□□□□ 0.21
C1GALT1-207ENST00000476068 SPDYE2Q495Y8 402 aa16.39■□□□□ 0.21
C1GALT1-207ENST00000476068 UBE3BQ7Z3V4 1068 aa16.39■□□□□ 0.21
C1GALT1-207ENST00000476068 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.39■□□□□ 0.21
C1GALT1-207ENST00000476068 NKX2-3Q8TAU0 364 aa16.39■□□□□ 0.21
C1GALT1-207ENST00000476068 ZNF70Q9UC06 446 aaPredicted RBP16.39■□□□□ 0.21
C1GALT1-207ENST00000476068 NR2E3Q9Y5X4 410 aa16.39■□□□□ 0.21
C1GALT1-207ENST00000476068 ALPK3Q96L96 1907 aa16.39■□□□□ 0.21
C1GALT1-207ENST00000476068 BTBD19C9JJ37 291 aa16.38■□□□□ 0.21
C1GALT1-207ENST00000476068 TAF5LO75529 589 aa16.38■□□□□ 0.21
C1GALT1-207ENST00000476068 WDHD1O75717 1129 aaPredicted RBP16.38■□□□□ 0.21
C1GALT1-207ENST00000476068 CCL5P13501 91 aa16.38■□□□□ 0.21
C1GALT1-207ENST00000476068 IL1R1P14778 569 aa16.38■□□□□ 0.21
C1GALT1-207ENST00000476068 FKBP1AP62942 108 aaKnown RBP16.38■□□□□ 0.21
C1GALT1-207ENST00000476068 TMEM39BQ9GZU3 492 aa16.38■□□□□ 0.21
C1GALT1-207ENST00000476068 TDRD3Q9H7E2 651 aaKnown RBP16.38■□□□□ 0.21
C1GALT1-207ENST00000476068 CSADQ9Y600 493 aa16.38■□□□□ 0.21
C1GALT1-207ENST00000476068 A0A1W2PPC1 479 aa16.37■□□□□ 0.21
C1GALT1-207ENST00000476068 PI4KAP2A4QPH2 592 aa16.37■□□□□ 0.21
C1GALT1-207ENST00000476068 SPDYE5A6NIY4 337 aa16.37■□□□□ 0.21
C1GALT1-207ENST00000476068 NEURL1BA8MQ27 555 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms