RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 TEX13AQ9BXU3 409 aaPredicted RBP8.18□□□□□ -1.1
UBR4-212ENST00000475973 UPF3BQ9BZI7 483 aaKnown RBP8.18□□□□□ -1.1
UBR4-212ENST00000475973 FAM117AQ9C073 453 aa8.18□□□□□ -1.1
UBR4-212ENST00000475973 ECHDC1Q9NTX5 307 aa8.18□□□□□ -1.1
UBR4-212ENST00000475973 SRP68Q9UHB9 627 aaKnown RBP8.18□□□□□ -1.1
UBR4-212ENST00000475973 ZBTB1Q9Y2K1 713 aa8.18□□□□□ -1.1
UBR4-212ENST00000475973 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.18□□□□□ -1.1
UBR4-212ENST00000475973 COL5A3P25940 1745 aaPredicted RBP8.17□□□□□ -1.1
UBR4-212ENST00000475973 A0A087WZG4 1122 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 PI4KAP2A4QPH2 592 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 APBB1O00213 710 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 SRGAP3O43295 1099 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 AP5Z1O43299 807 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 LARGE1O95461 756 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 DPEP1P16444 411 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 PTH1RQ03431 593 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 ZNF790Q6PG37 636 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 KSR2Q6VAB6 950 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 LRP10Q7Z4F1 713 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 NUTM1Q86Y26 1132 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 PARP9Q8IXQ6 854 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 PI4KAP1Q8N8J0 262 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 KIAA1524Q8TCG1 905 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 RUFY2Q8WXA3 655 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 RILPL2Q969X0 211 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 EVI5LQ96CN4 794 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 FMNL2Q96PY5 1086 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 IL1RAPL2Q9NP60 686 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 NPDC1Q9NQX5 325 aaPredicted RBP8.17□□□□□ -1.1
UBR4-212ENST00000475973 NARFQ9UHQ1 456 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 HDAC5Q9UQL6 1122 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 ATP6V1DQ9Y5K8 247 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 C4AP0C0L4 1744 aa8.17□□□□□ -1.1
UBR4-212ENST00000475973 A0A0G2JLW4 131 aa8.16□□□□□ -1.1
UBR4-212ENST00000475973 BTBD11A6QL63 1104 aa8.16□□□□□ -1.1
UBR4-212ENST00000475973 TRIM6-TRIM34B2RNG4 842 aa8.16□□□□□ -1.1
UBR4-212ENST00000475973 HIP1O00291 1037 aa8.16□□□□□ -1.1
UBR4-212ENST00000475973 POLRMTO00411 1230 aaKnown RBP8.16□□□□□ -1.1
UBR4-212ENST00000475973 SASH1O94885 1247 aa8.16□□□□□ -1.1
UBR4-212ENST00000475973 TPM3P06753 285 aa8.16□□□□□ -1.1
UBR4-212ENST00000475973 NCLP19338 710 aaKnown RBP8.16□□□□□ -1.1
UBR4-212ENST00000475973 TJP1Q07157 1748 aa8.16□□□□□ -1.1
UBR4-212ENST00000475973 DDR1Q08345 913 aa8.16□□□□□ -1.1
UBR4-212ENST00000475973 KIAA2012Q0VF49 1180 aa8.16□□□□□ -1.1
UBR4-212ENST00000475973 LINS1Q8NG48 757 aa8.16□□□□□ -1.1
UBR4-212ENST00000475973 PIM2Q9P1W9 311 aa8.16□□□□□ -1.1
UBR4-212ENST00000475973 DBF4Q9UBU7 674 aaPredicted RBP8.16□□□□□ -1.1
UBR4-212ENST00000475973 ZNF330Q9Y3S2 320 aaPredicted RBP8.16□□□□□ -1.1
UBR4-212ENST00000475973 NPHP1O15259 732 aa8.15□□□□□ -1.1
UBR4-212ENST00000475973 CTIFO43310 598 aaKnown RBP8.15□□□□□ -1.1
UBR4-212ENST00000475973 NOLC1Q14978 699 aaKnown RBP eCLIP8.15□□□□□ -1.1
UBR4-212ENST00000475973 ME3Q16798 604 aa8.15□□□□□ -1.1
UBR4-212ENST00000475973 ADCK5Q3MIX3 580 aa8.15□□□□□ -1.1
UBR4-212ENST00000475973 DALRD3Q5D0E6 543 aaKnown RBP8.15□□□□□ -1.1
UBR4-212ENST00000475973 ARHGAP27Q6ZUM4 889 aa8.15□□□□□ -1.1
UBR4-212ENST00000475973 FBXL16Q8N461 479 aa8.15□□□□□ -1.1
UBR4-212ENST00000475973 RGS22Q8NE09 1264 aa8.15□□□□□ -1.1
UBR4-212ENST00000475973 ZNF526Q8TF50 670 aaPredicted RBP8.15□□□□□ -1.1
UBR4-212ENST00000475973 ZNF496Q96IT1 587 aaPredicted RBP8.15□□□□□ -1.1
UBR4-212ENST00000475973 AGXT2Q9BYV1 514 aa8.15□□□□□ -1.1
UBR4-212ENST00000475973 CHPF2Q9P2E5 772 aa8.15□□□□□ -1.1
UBR4-212ENST00000475973 CNPY2Q9Y2B0 182 aa8.15□□□□□ -1.1
UBR4-212ENST00000475973 R3HCC1Q9Y3T6 440 aaKnown RBP8.15□□□□□ -1.1
UBR4-212ENST00000475973 PCDHGA4Q9Y5G9 962 aa8.15□□□□□ -1.1
UBR4-212ENST00000475973 PCDHGA10Q9Y5H3 936 aa8.15□□□□□ -1.1
UBR4-212ENST00000475973 TCHHQ07283 1943 aa8.15□□□□□ -1.11
UBR4-212ENST00000475973 SCN11AQ9UI33 1791 aa8.15□□□□□ -1.11
UBR4-212ENST00000475973 UTRNP46939 3433 aa8.15□□□□□ -1.11
UBR4-212ENST00000475973 UQCRHLA0A096LP55 91 aa8.14□□□□□ -1.11
UBR4-212ENST00000475973 KCNQ3O43525 872 aa8.14□□□□□ -1.11
UBR4-212ENST00000475973 ADCY5O95622 1261 aa8.14□□□□□ -1.11
UBR4-212ENST00000475973 UQCRHP07919 91 aa8.14□□□□□ -1.11
UBR4-212ENST00000475973 IL6STP40189 918 aaPredicted RBP8.14□□□□□ -1.11
UBR4-212ENST00000475973 RFX5P48382 616 aaPredicted RBP8.14□□□□□ -1.11
UBR4-212ENST00000475973 NFIXQ14938 502 aa8.14□□□□□ -1.11
UBR4-212ENST00000475973 SYCP1Q15431 976 aa8.14□□□□□ -1.11
UBR4-212ENST00000475973 RABL6Q3YEC7 729 aaPredicted RBP8.14□□□□□ -1.11
UBR4-212ENST00000475973 CREB3L3Q68CJ9 461 aa8.14□□□□□ -1.11
UBR4-212ENST00000475973 TTC6Q86TZ1 520 aa8.14□□□□□ -1.11
UBR4-212ENST00000475973 ZNF710Q8N1W2 664 aa8.14□□□□□ -1.11
UBR4-212ENST00000475973 CLASRPQ8N2M8 674 aaKnown RBP8.14□□□□□ -1.11
UBR4-212ENST00000475973 EAF2Q96CJ1 260 aaPredicted RBP8.14□□□□□ -1.11
UBR4-212ENST00000475973 KCNF1Q9H3M0 494 aa8.14□□□□□ -1.11
UBR4-212ENST00000475973 GDPD2Q9HCC8 539 aa8.14□□□□□ -1.11
UBR4-212ENST00000475973 COPRSQ9NQ92 184 aa8.14□□□□□ -1.11
UBR4-212ENST00000475973 DDX21Q9NR30 783 aaKnown RBP eCLIP8.14□□□□□ -1.11
UBR4-212ENST00000475973 KCND1Q9NSA2 647 aa8.14□□□□□ -1.11
UBR4-212ENST00000475973 PDRG1Q9NUG6 133 aa8.14□□□□□ -1.11
UBR4-212ENST00000475973 HMG20BQ9P0W2 317 aa8.14□□□□□ -1.11
UBR4-212ENST00000475973 SMC3Q9UQE7 1217 aa8.14□□□□□ -1.11
UBR4-212ENST00000475973 CARMIL3Q8ND23 1372 aa8.13□□□□□ -1.11
UBR4-212ENST00000475973 SLC27A2O14975 620 aa8.13□□□□□ -1.11
UBR4-212ENST00000475973 SERPINB2P05120 415 aa8.13□□□□□ -1.11
UBR4-212ENST00000475973 RPS6KB1P23443 525 aa8.13□□□□□ -1.11
UBR4-212ENST00000475973 GJB2P29033 226 aa8.13□□□□□ -1.11
UBR4-212ENST00000475973 TM4SF1P30408 202 aa8.13□□□□□ -1.11
UBR4-212ENST00000475973 EIF5P55010 431 aaKnown RBP8.13□□□□□ -1.11
UBR4-212ENST00000475973 TOB2Q14106 344 aaPredicted RBP8.13□□□□□ -1.11
UBR4-212ENST00000475973 ANKRD1Q15327 319 aa8.13□□□□□ -1.11
UBR4-212ENST00000475973 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms