RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 TRIM35Q9UPQ4 493 aa18■□□□□ 0.47
FAM3A-218ENST00000475657 NBPF12Q5TAG4 269 aaPredicted RBP17.99■□□□□ 0.47
FAM3A-218ENST00000475657 ANKRD2Q9GZV1 360 aa17.99■□□□□ 0.47
FAM3A-218ENST00000475657 PRO3102Q9H379 93 aa17.99■□□□□ 0.47
FAM3A-218ENST00000475657 GREM2Q9H772 168 aa17.99■□□□□ 0.47
FAM3A-218ENST00000475657 PHAXQ9H814 394 aaKnown RBP17.99■□□□□ 0.47
FAM3A-218ENST00000475657 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.99■□□□□ 0.47
FAM3A-218ENST00000475657 GNRH1P01148 92 aa17.98■□□□□ 0.47
FAM3A-218ENST00000475657 OPTNQ96CV9 577 aa17.98■□□□□ 0.47
FAM3A-218ENST00000475657 SPDYE2BA6NHP3 402 aa17.97■□□□□ 0.47
FAM3A-218ENST00000475657 DDX58O95786 925 aaKnown RBP17.97■□□□□ 0.47
FAM3A-218ENST00000475657 SPDYE6P0CI01 402 aa17.97■□□□□ 0.47
FAM3A-218ENST00000475657 PRMT2P55345 433 aa17.97■□□□□ 0.47
FAM3A-218ENST00000475657 TAF1CQ15572 869 aaPredicted RBP17.97■□□□□ 0.47
FAM3A-218ENST00000475657 NEUROD2Q15784 382 aa17.97■□□□□ 0.47
FAM3A-218ENST00000475657 CCDC146Q8IYE0 955 aa17.97■□□□□ 0.47
FAM3A-218ENST00000475657 CERS5Q8N5B7 392 aa17.97■□□□□ 0.47
FAM3A-218ENST00000475657 BRI3BPQ8WY22 251 aa17.97■□□□□ 0.47
FAM3A-218ENST00000475657 CD209Q9NNX6 404 aa17.97■□□□□ 0.47
FAM3A-218ENST00000475657 IGHMBP2P38935 993 aaKnown RBP17.96■□□□□ 0.47
FAM3A-218ENST00000475657 FKBP1AP62942 108 aaKnown RBP17.96■□□□□ 0.47
FAM3A-218ENST00000475657 RASA3Q14644 834 aa17.96■□□□□ 0.47
FAM3A-218ENST00000475657 DPF3Q92784 378 aa17.96■□□□□ 0.47
FAM3A-218ENST00000475657 PRMT6Q96LA8 375 aaPredicted RBP17.96■□□□□ 0.47
FAM3A-218ENST00000475657 WDHD1O75717 1129 aaPredicted RBP17.95■□□□□ 0.46
FAM3A-218ENST00000475657 KLRK1P26718 216 aa17.95■□□□□ 0.46
FAM3A-218ENST00000475657 GTF2A2P52657 109 aa17.95■□□□□ 0.46
FAM3A-218ENST00000475657 CFAP100Q494V2 611 aa17.95■□□□□ 0.46
FAM3A-218ENST00000475657 NKX2-3Q8TAU0 364 aa17.95■□□□□ 0.46
FAM3A-218ENST00000475657 SH3TC2Q8TF17 1288 aa17.95■□□□□ 0.46
FAM3A-218ENST00000475657 ELP3Q9H9T3 547 aa17.95■□□□□ 0.46
FAM3A-218ENST00000475657 ZCCHC17Q9NP64 241 aaKnown RBP17.95■□□□□ 0.46
FAM3A-218ENST00000475657 CCL15-CCL14A0A0B4J2E2 113 aa17.94■□□□□ 0.46
FAM3A-218ENST00000475657 A0A1W2PPC1 479 aa17.94■□□□□ 0.46
FAM3A-218ENST00000475657 CLRN2A0PK11 232 aa17.94■□□□□ 0.46
FAM3A-218ENST00000475657 TNFAIP1Q13829 316 aa17.94■□□□□ 0.46
FAM3A-218ENST00000475657 KIF22Q14807 665 aa17.94■□□□□ 0.46
FAM3A-218ENST00000475657 RALBP1Q15311 655 aa17.94■□□□□ 0.46
FAM3A-218ENST00000475657 CCL15Q16663 113 aa17.94■□□□□ 0.46
FAM3A-218ENST00000475657 C15orf52Q6ZUT6 534 aaKnown RBP17.94■□□□□ 0.46
FAM3A-218ENST00000475657 CHMP4AQ9BY43 222 aa17.94■□□□□ 0.46
FAM3A-218ENST00000475657 VEZTQ9HBM0 779 aa17.94■□□□□ 0.46
FAM3A-218ENST00000475657 PCDHAC2Q9Y5I4 1007 aa17.94■□□□□ 0.46
FAM3A-218ENST00000475657 COL6A3P12111 3177 aa17.94■□□□□ 0.46
FAM3A-218ENST00000475657 TLR2O60603 784 aa17.93■□□□□ 0.46
FAM3A-218ENST00000475657 MYCP01106 439 aaPredicted RBP17.93■□□□□ 0.46
FAM3A-218ENST00000475657 LACTBP83111 547 aaPredicted RBP17.93■□□□□ 0.46
FAM3A-218ENST00000475657 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.93■□□□□ 0.46
FAM3A-218ENST00000475657 UBE2Q1Q7Z7E8 422 aa17.93■□□□□ 0.46
FAM3A-218ENST00000475657 FAM43AQ8N2R8 423 aa17.93■□□□□ 0.46
FAM3A-218ENST00000475657 SHISA4Q96DD7 197 aa17.93■□□□□ 0.46
FAM3A-218ENST00000475657 HTATIP2Q9BUP3 242 aa17.93■□□□□ 0.46
FAM3A-218ENST00000475657 MBIPQ9NS73 344 aa17.93■□□□□ 0.46
FAM3A-218ENST00000475657 IGKV5-2P06315 115 aa17.92■□□□□ 0.46
FAM3A-218ENST00000475657 ZNF853P0CG23 659 aa17.92■□□□□ 0.46
FAM3A-218ENST00000475657 MNX1P50219 401 aaPredicted RBP17.92■□□□□ 0.46
FAM3A-218ENST00000475657 RUNDC1Q96C34 613 aa17.92■□□□□ 0.46
FAM3A-218ENST00000475657 NR2E3Q9Y5X4 410 aa17.92■□□□□ 0.46
FAM3A-218ENST00000475657 IRS2Q9Y4H2 1338 aa17.92■□□□□ 0.46
FAM3A-218ENST00000475657 ECM29Q5VYK3 1845 aa17.91■□□□□ 0.46
FAM3A-218ENST00000475657 IL1R1P14778 569 aa17.91■□□□□ 0.46
FAM3A-218ENST00000475657 KCNJ4P48050 445 aa17.91■□□□□ 0.46
FAM3A-218ENST00000475657 MAP3K9P80192 1104 aa17.91■□□□□ 0.46
FAM3A-218ENST00000475657 KSR2Q6VAB6 950 aa17.91■□□□□ 0.46
FAM3A-218ENST00000475657 MPHOSPH8Q99549 860 aa17.91■□□□□ 0.46
FAM3A-218ENST00000475657 PLA2G12BQ9BX93 195 aa17.91■□□□□ 0.46
FAM3A-218ENST00000475657 MAP3K2Q9Y2U5 619 aa17.91■□□□□ 0.46
FAM3A-218ENST00000475657 H7C1W4 665 aa17.9■□□□□ 0.46
FAM3A-218ENST00000475657 GJA8P48165 433 aa17.9■□□□□ 0.46
FAM3A-218ENST00000475657 HELBQ8NG08 1087 aaPredicted RBP17.9■□□□□ 0.46
FAM3A-218ENST00000475657 TEPSINQ96N21 525 aa17.9■□□□□ 0.46
FAM3A-218ENST00000475657 ARHGAP39Q9C0H5 1083 aa17.9■□□□□ 0.46
FAM3A-218ENST00000475657 AOX1Q06278 1338 aa17.9■□□□□ 0.46
FAM3A-218ENST00000475657 F8W031 263 aaPredicted RBP17.89■□□□□ 0.45
FAM3A-218ENST00000475657 GJB1P08034 283 aa17.89■□□□□ 0.45
FAM3A-218ENST00000475657 ITGA6P23229 1130 aa17.89■□□□□ 0.45
FAM3A-218ENST00000475657 CHRNDQ07001 517 aa17.89■□□□□ 0.45
FAM3A-218ENST00000475657 NEXNQ0ZGT2 675 aa17.89■□□□□ 0.45
FAM3A-218ENST00000475657 VGLL4Q14135 290 aa17.89■□□□□ 0.45
FAM3A-218ENST00000475657 SPDYE2Q495Y8 402 aa17.89■□□□□ 0.45
FAM3A-218ENST00000475657 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.89■□□□□ 0.453e-8■■■□□ 15.3
FAM3A-218ENST00000475657 CNKSR2Q8WXI2 1034 aa17.89■□□□□ 0.45
FAM3A-218ENST00000475657 CSADQ9Y600 493 aa17.89■□□□□ 0.45
FAM3A-218ENST00000475657 LAMA3Q16787 3333 aa17.88■□□□□ 0.45
FAM3A-218ENST00000475657 PI4KAP2A4QPH2 592 aa17.88■□□□□ 0.45
FAM3A-218ENST00000475657 SPDYE5A6NIY4 337 aa17.88■□□□□ 0.45
FAM3A-218ENST00000475657 CSF1RP07333 972 aa17.88■□□□□ 0.45
FAM3A-218ENST00000475657 CETPP11597 493 aa17.88■□□□□ 0.45
FAM3A-218ENST00000475657 MTFR1Q15390 333 aa17.88■□□□□ 0.45
FAM3A-218ENST00000475657 CCDC30Q5VVM6 783 aa17.88■□□□□ 0.45
FAM3A-218ENST00000475657 PI4KAP1Q8N8J0 262 aa17.88■□□□□ 0.45
FAM3A-218ENST00000475657 MYBBP1AQ9BQG0 1328 aaKnown RBP17.88■□□□□ 0.45
FAM3A-218ENST00000475657 MYH3P11055 1940 aa17.88■□□□□ 0.45
FAM3A-218ENST00000475657 NEURL1BA8MQ27 555 aa17.87■□□□□ 0.45
FAM3A-218ENST00000475657 ZBTB7BO15156 539 aaPredicted RBP17.87■□□□□ 0.45
FAM3A-218ENST00000475657 RBM5P52756 815 aaKnown RBP eCLIP17.87■□□□□ 0.45
FAM3A-218ENST00000475657 ZNF804AQ7Z570 1209 aa17.87■□□□□ 0.45
FAM3A-218ENST00000475657 IFT57Q9NWB7 429 aa17.87■□□□□ 0.45
FAM3A-218ENST00000475657 ZNF70Q9UC06 446 aaPredicted RBP17.87■□□□□ 0.45
FAM3A-218ENST00000475657 SRRDQ9UH36 339 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms