RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 ASAP3Q8TDY4 903 aa8.19□□□□□ -1.1
SDHB-205ENST00000475506 GTPBP3Q969Y2 492 aaKnown RBP8.19□□□□□ -1.1
SDHB-205ENST00000475506 POP1Q99575 1024 aaKnown RBP8.19□□□□□ -1.1
SDHB-205ENST00000475506 PBX4Q9BYU1 374 aa8.19□□□□□ -1.1
SDHB-205ENST00000475506 MUC3BQ9H195 1237 aa8.19□□□□□ -1.1
SDHB-205ENST00000475506 AAASQ9NRG9 546 aa8.19□□□□□ -1.1
SDHB-205ENST00000475506 ANKRD62A6NC57 917 aa8.18□□□□□ -1.1
SDHB-205ENST00000475506 K7ELQ4 463 aaPredicted RBP8.18□□□□□ -1.1
SDHB-205ENST00000475506 KLF4O43474 513 aa8.18□□□□□ -1.1
SDHB-205ENST00000475506 ZNF157P51786 506 aaPredicted RBP8.18□□□□□ -1.1
SDHB-205ENST00000475506 CTBSQ01459 385 aa8.18□□□□□ -1.1
SDHB-205ENST00000475506 RPS26P11Q5JNZ5 115 aaPredicted RBP8.18□□□□□ -1.1
SDHB-205ENST00000475506 SNAP47Q5SQN1 464 aa8.18□□□□□ -1.1
SDHB-205ENST00000475506 NBPF6Q5VWK0 638 aa8.18□□□□□ -1.1
SDHB-205ENST00000475506 PCNX4Q63HM2 1172 aa8.18□□□□□ -1.1
SDHB-205ENST00000475506 BNC2Q6ZN30 1099 aaPredicted RBP8.18□□□□□ -1.1
SDHB-205ENST00000475506 ANKS3Q6ZW76 656 aa8.18□□□□□ -1.1
SDHB-205ENST00000475506 NBPF4Q96M43 638 aa8.18□□□□□ -1.1
SDHB-205ENST00000475506 ZFYVE1Q9HBF4 777 aa8.18□□□□□ -1.1
SDHB-205ENST00000475506 ATXN7L1Q9ULK2 861 aaPredicted RBP8.18□□□□□ -1.1
SDHB-205ENST00000475506 PCDHB5Q9Y5E4 795 aa8.18□□□□□ -1.1
SDHB-205ENST00000475506 FGFR3P22607 806 aa8.17□□□□□ -1.1
SDHB-205ENST00000475506 APOBRQ0VD83 1088 aa8.17□□□□□ -1.1
SDHB-205ENST00000475506 FAM182BQ5T319 152 aa8.17□□□□□ -1.1
SDHB-205ENST00000475506 EGFLAMQ63HQ2 1017 aa8.17□□□□□ -1.1
SDHB-205ENST00000475506 KANK3Q6NY19 840 aa8.17□□□□□ -1.1
SDHB-205ENST00000475506 FAM196AQ6ZSG2 479 aa8.17□□□□□ -1.1
SDHB-205ENST00000475506 SLITRK4Q8IW52 837 aa8.17□□□□□ -1.1
SDHB-205ENST00000475506 SPACA7Q96KW9 195 aa8.17□□□□□ -1.1
SDHB-205ENST00000475506 PPM1GO15355 546 aaPredicted RBP8.16□□□□□ -1.1
SDHB-205ENST00000475506 F13A1P00488 732 aa8.16□□□□□ -1.1
SDHB-205ENST00000475506 BMP6P22004 513 aa8.16□□□□□ -1.1
SDHB-205ENST00000475506 ITGA6P23229 1130 aa8.16□□□□□ -1.1
SDHB-205ENST00000475506 RPS26P62854 115 aaKnown RBP8.16□□□□□ -1.1
SDHB-205ENST00000475506 COL9A2Q14055 689 aaPredicted RBP8.16□□□□□ -1.1
SDHB-205ENST00000475506 TCEAL1Q15170 157 aa8.16□□□□□ -1.1
SDHB-205ENST00000475506 CCDC81Q6ZN84 652 aa8.16□□□□□ -1.1
SDHB-205ENST00000475506 TRIM42Q8IWZ5 723 aa8.16□□□□□ -1.1
SDHB-205ENST00000475506 HNRNPLLQ8WVV9 542 aaKnown RBP8.16□□□□□ -1.1
SDHB-205ENST00000475506 NKD1Q969G9 470 aa8.16□□□□□ -1.1
SDHB-205ENST00000475506 PLD4Q96BZ4 506 aa8.16□□□□□ -1.1
SDHB-205ENST00000475506 SHDQ96IW2 340 aa8.16□□□□□ -1.1
SDHB-205ENST00000475506 DNAJB12Q9NXW2 375 aaKnown RBP8.16□□□□□ -1.1
SDHB-205ENST00000475506 GPN3Q9UHW5 284 aaPredicted RBP8.16□□□□□ -1.1
SDHB-205ENST00000475506 STRIP2Q9ULQ0 834 aa8.16□□□□□ -1.1
SDHB-205ENST00000475506 PPT2Q9UMR5 302 aa8.16□□□□□ -1.1
SDHB-205ENST00000475506 SBNO2Q9Y2G9 1366 aa8.16□□□□□ -1.1
SDHB-205ENST00000475506 MRPL42Q9Y6G3 142 aaKnown RBP8.16□□□□□ -1.1
SDHB-205ENST00000475506 TLR3O15455 904 aaKnown RBP8.15□□□□□ -1.1
SDHB-205ENST00000475506 RGS20O76081 388 aa8.15□□□□□ -1.1
SDHB-205ENST00000475506 ZNF423Q2M1K9 1284 aa8.15□□□□□ -1.1
SDHB-205ENST00000475506 SEZ6Q53EL9 994 aa8.15□□□□□ -1.1
SDHB-205ENST00000475506 FAM169BQ8N8A8 192 aa8.15□□□□□ -1.1
SDHB-205ENST00000475506 STK35Q8TDR2 534 aa8.15□□□□□ -1.1
SDHB-205ENST00000475506 ANAPC16Q96DE5 110 aa8.15□□□□□ -1.1
SDHB-205ENST00000475506 IGFLR1Q9H665 355 aa8.15□□□□□ -1.1
SDHB-205ENST00000475506 TMEM39AQ9NV64 488 aa8.15□□□□□ -1.1
SDHB-205ENST00000475506 FAM221AA4D161 298 aa8.14□□□□□ -1.11
SDHB-205ENST00000475506 GPR25O00155 361 aa8.14□□□□□ -1.11
SDHB-205ENST00000475506 NRG2O14511 850 aaPredicted RBP8.14□□□□□ -1.11
SDHB-205ENST00000475506 C2CD2LO14523 706 aa8.14□□□□□ -1.11
SDHB-205ENST00000475506 GFRA3O60609 400 aa8.14□□□□□ -1.11
SDHB-205ENST00000475506 CDK11BP21127 795 aaKnown RBP8.14□□□□□ -1.11
SDHB-205ENST00000475506 RAB33AQ14088 237 aa8.14□□□□□ -1.11
SDHB-205ENST00000475506 VN1R5Q7Z5H4 357 aa8.14□□□□□ -1.11
SDHB-205ENST00000475506 SRRTQ9BXP5 876 aaKnown RBP8.14□□□□□ -1.11
SDHB-205ENST00000475506 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.14□□□□□ -1.11
SDHB-205ENST00000475506 SEPT6Q14141 434 aa8.13□□□□□ -1.11
SDHB-205ENST00000475506 NFE2L2Q16236 605 aa8.13□□□□□ -1.11
SDHB-205ENST00000475506 CEP135Q66GS9 1140 aa8.13□□□□□ -1.11
SDHB-205ENST00000475506 SYT9Q86SS6 491 aa8.13□□□□□ -1.11
SDHB-205ENST00000475506 MKL1Q969V6 931 aa8.13□□□□□ -1.11
SDHB-205ENST00000475506 GMCL1Q96IK5 515 aa8.13□□□□□ -1.11
SDHB-205ENST00000475506 LRRC3Q9BY71 257 aa8.13□□□□□ -1.11
SDHB-205ENST00000475506 CLEC4MQ9H2X3 399 aaPredicted RBP8.13□□□□□ -1.11
SDHB-205ENST00000475506 PRKAG3Q9UGI9 489 aa8.13□□□□□ -1.11
SDHB-205ENST00000475506 FAM221BA6H8Z2 402 aa8.12□□□□□ -1.11
SDHB-205ENST00000475506 SMAD7O15105 426 aaKnown RBP8.12□□□□□ -1.11
SDHB-205ENST00000475506 EIF2AK2P19525 551 aaKnown RBP8.12□□□□□ -1.11
SDHB-205ENST00000475506 PCDH1Q08174 1060 aa8.12□□□□□ -1.11
SDHB-205ENST00000475506 GRIN3AQ8TCU5 1115 aa8.12□□□□□ -1.11
SDHB-205ENST00000475506 CPLX3Q8WVH0 158 aa8.12□□□□□ -1.11
SDHB-205ENST00000475506 GATAD2BQ8WXI9 593 aa8.12□□□□□ -1.11
SDHB-205ENST00000475506 BSNDQ8WZ55 320 aa8.12□□□□□ -1.11
SDHB-205ENST00000475506 JARID2Q92833 1246 aaPredicted RBP8.12□□□□□ -1.11
SDHB-205ENST00000475506 MRFAP1L1Q96HT8 127 aa8.12□□□□□ -1.11
SDHB-205ENST00000475506 SIRPGQ9P1W8 387 aa8.12□□□□□ -1.11
SDHB-205ENST00000475506 NAGPAQ9UK23 515 aa8.12□□□□□ -1.11
SDHB-205ENST00000475506 SOX13Q9UN79 622 aa8.12□□□□□ -1.11
SDHB-205ENST00000475506 ROBO2Q9HCK4 1378 aa8.11□□□□□ -1.11
SDHB-205ENST00000475506 B3GALT4O96024 378 aa8.11□□□□□ -1.11
SDHB-205ENST00000475506 GHRHP01286 108 aa8.11□□□□□ -1.11
SDHB-205ENST00000475506 PCBP4P57723 403 aaKnown RBP8.11□□□□□ -1.11
SDHB-205ENST00000475506 TBC1D8BQ0IIM8 1120 aa8.11□□□□□ -1.11
SDHB-205ENST00000475506 RASA3Q14644 834 aa8.11□□□□□ -1.11
SDHB-205ENST00000475506 ZNF468Q5VIY5 522 aaPredicted RBP8.11□□□□□ -1.11
SDHB-205ENST00000475506 CCDC84Q86UT8 332 aaPredicted RBP8.11□□□□□ -1.11
SDHB-205ENST00000475506 CELF2-AS1Q8N7Q2 184 aa8.11□□□□□ -1.11
SDHB-205ENST00000475506 UBE2OQ9C0C9 1292 aaKnown RBP8.11□□□□□ -1.11
SDHB-205ENST00000475506 SNTG2Q9NY99 539 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms