RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 KCNJ4P48050 445 aa24.95■■□□□ 1.58
SH3D21-202ENST00000474766 DDR1Q08345 913 aa24.95■■□□□ 1.58
SH3D21-202ENST00000474766 TSGA10IPQ3SY00 556 aa24.95■■□□□ 1.58
SH3D21-202ENST00000474766 OGFRQ9NZT2 677 aa24.95■■□□□ 1.58
SH3D21-202ENST00000474766 RNF20Q5VTR2 975 aa24.94■■□□□ 1.58
SH3D21-202ENST00000474766 ALDH8A1Q9H2A2 487 aaPredicted RBP24.94■■□□□ 1.58
SH3D21-202ENST00000474766 TM4SF1P30408 202 aa24.93■■□□□ 1.58
SH3D21-202ENST00000474766 FOXO4P98177 505 aa24.93■■□□□ 1.58
SH3D21-202ENST00000474766 NFIXQ14938 502 aa24.93■■□□□ 1.58
SH3D21-202ENST00000474766 ZBTB3Q9H5J0 574 aa24.93■■□□□ 1.58
SH3D21-202ENST00000474766 MAP3K15Q6ZN16 1313 aa24.93■■□□□ 1.58
SH3D21-202ENST00000474766 ST3GAL1Q11201 340 aa24.93■■□□□ 1.58
SH3D21-202ENST00000474766 HLFQ16534 295 aa24.93■■□□□ 1.58
SH3D21-202ENST00000474766 ME3Q16798 604 aa24.93■■□□□ 1.58
SH3D21-202ENST00000474766 CCDC83Q8IWF9 413 aa24.93■■□□□ 1.58
SH3D21-202ENST00000474766 AP5Z1O43299 807 aa24.92■■□□□ 1.58
SH3D21-202ENST00000474766 TAF5LO75529 589 aa24.92■■□□□ 1.58
SH3D21-202ENST00000474766 TBC1D9BQ66K14 1250 aa24.92■■□□□ 1.58
SH3D21-202ENST00000474766 GIMAP6Q6P9H5 292 aa24.92■■□□□ 1.58
SH3D21-202ENST00000474766 LMBR1LQ6UX01 489 aa24.92■■□□□ 1.58
SH3D21-202ENST00000474766 ZNF589Q86UQ0 364 aaPredicted RBP24.92■■□□□ 1.58
SH3D21-202ENST00000474766 HMG20BQ9P0W2 317 aa24.92■■□□□ 1.58
SH3D21-202ENST00000474766 GJB2P29033 226 aa24.91■■□□□ 1.58
SH3D21-202ENST00000474766 KIF6Q6ZMV9 814 aa24.91■■□□□ 1.58
SH3D21-202ENST00000474766 EDC3Q96F86 508 aaKnown RBP24.91■■□□□ 1.58
SH3D21-202ENST00000474766 FHDC1Q9C0D6 1143 aaPredicted RBP24.91■■□□□ 1.58
SH3D21-202ENST00000474766 TAF7LQ5H9L4 462 aa24.91■■□□□ 1.58
SH3D21-202ENST00000474766 BICDL1Q6ZP65 573 aa24.91■■□□□ 1.58
SH3D21-202ENST00000474766 FAM200AQ8TCP9 573 aa24.91■■□□□ 1.58
SH3D21-202ENST00000474766 TPCN1Q9ULQ1 816 aa24.91■■□□□ 1.58
SH3D21-202ENST00000474766 FAM177BA6PVY3 158 aa24.9■■□□□ 1.58
SH3D21-202ENST00000474766 ERVV-1B6SEH8 477 aa24.9■■□□□ 1.58
SH3D21-202ENST00000474766 POLRMTO00411 1230 aaKnown RBP24.9■■□□□ 1.58
SH3D21-202ENST00000474766 HAUS7Q99871 368 aa24.9■■□□□ 1.58
SH3D21-202ENST00000474766 NRXN2Q9P2S2 1712 aa24.9■■□□□ 1.58
SH3D21-202ENST00000474766 SMTNL1A8MU46 457 aa24.9■■□□□ 1.58
SH3D21-202ENST00000474766 FIBPO43427 364 aa24.9■■□□□ 1.58
SH3D21-202ENST00000474766 GABPB1Q06547 395 aaPredicted RBP24.9■■□□□ 1.58
SH3D21-202ENST00000474766 DBNDD2Q9BQY9 259 aa24.9■■□□□ 1.58
SH3D21-202ENST00000474766 CWC25Q9NXE8 425 aaPredicted RBP24.9■■□□□ 1.58
SH3D21-202ENST00000474766 MTMR6Q9Y217 621 aa24.89■■□□□ 1.57
SH3D21-202ENST00000474766 KIF13BQ9NQT8 1826 aa24.88■■□□□ 1.57
SH3D21-202ENST00000474766 COL9A3Q14050 684 aaPredicted RBP24.88■■□□□ 1.57
SH3D21-202ENST00000474766 ANKRD1Q15327 319 aa24.88■■□□□ 1.57
SH3D21-202ENST00000474766 BLOC1S2Q6QNY1 142 aa24.88■■□□□ 1.57
SH3D21-202ENST00000474766 CLEC4GQ6UXB4 293 aa24.88■■□□□ 1.57
SH3D21-202ENST00000474766 GIGYF2Q6Y7W6 1299 aaKnown RBP24.88■■□□□ 1.57
SH3D21-202ENST00000474766 PARP3Q9Y6F1 533 aa24.88■■□□□ 1.57
SH3D21-202ENST00000474766 RPS6KB1P23443 525 aa24.88■■□□□ 1.57
SH3D21-202ENST00000474766 U2AF2P26368 475 aaKnown RBP eCLIP24.88■■□□□ 1.57
SH3D21-202ENST00000474766 PLCB2Q00722 1185 aa24.88■■□□□ 1.57
SH3D21-202ENST00000474766 ATG9AQ7Z3C6 839 aa24.88■■□□□ 1.57
SH3D21-202ENST00000474766 GPR108Q9NPR9 543 aa24.88■■□□□ 1.57
SH3D21-202ENST00000474766 SPDYE4A6NLX3 237 aa24.87■■□□□ 1.57
SH3D21-202ENST00000474766 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.87■■□□□ 1.57
SH3D21-202ENST00000474766 PAXBP1Q9Y5B6 917 aa24.87■■□□□ 1.57
SH3D21-202ENST00000474766 TAF6LQ9Y6J9 622 aa24.87■■□□□ 1.57
SH3D21-202ENST00000474766 NCBP1Q09161 790 aaKnown RBP24.86■■□□□ 1.57
SH3D21-202ENST00000474766 CCDC191Q8NCU4 936 aa24.86■■□□□ 1.57
SH3D21-202ENST00000474766 CGNQ9P2M7 1197 aaKnown RBP24.86■■□□□ 1.57
SH3D21-202ENST00000474766 ZNF652Q9Y2D9 606 aa24.86■■□□□ 1.57
SH3D21-202ENST00000474766 ANKRD36CQ5JPF3 1778 aa24.86■■□□□ 1.57
SH3D21-202ENST00000474766 RGL2O15211 777 aa24.86■■□□□ 1.57
SH3D21-202ENST00000474766 SYT17Q9BSW7 474 aa24.86■■□□□ 1.57
SH3D21-202ENST00000474766 ZNF609O15014 1411 aa24.86■■□□□ 1.57
SH3D21-202ENST00000474766 TICAM2Q86XR7 235 aa24.85■■□□□ 1.57
SH3D21-202ENST00000474766 NECAB1Q8N987 351 aa24.85■■□□□ 1.57
SH3D21-202ENST00000474766 C10orf71Q711Q0 1435 aa24.85■■□□□ 1.57
SH3D21-202ENST00000474766 ELP1O95163 1332 aa24.85■■□□□ 1.57
SH3D21-202ENST00000474766 KRT32Q14532 448 aa24.85■■□□□ 1.57
SH3D21-202ENST00000474766 CARMIL3Q8ND23 1372 aa24.84■■□□□ 1.57
SH3D21-202ENST00000474766 TOB2Q14106 344 aaPredicted RBP24.84■■□□□ 1.57
SH3D21-202ENST00000474766 SPC24Q8NBT2 197 aa24.84■■□□□ 1.57
SH3D21-202ENST00000474766 CTNNA3Q9UI47 895 aa24.84■■□□□ 1.57
SH3D21-202ENST00000474766 SERPINB2P05120 415 aa24.83■■□□□ 1.57
SH3D21-202ENST00000474766 DNM1Q05193 864 aaKnown RBP24.83■■□□□ 1.57
SH3D21-202ENST00000474766 TCIRG1Q13488 830 aa24.83■■□□□ 1.57
SH3D21-202ENST00000474766 MAP3K11Q16584 847 aa24.83■■□□□ 1.57
SH3D21-202ENST00000474766 SETDB2Q96T68 719 aa24.83■■□□□ 1.57
SH3D21-202ENST00000474766 DNAJC2Q99543 621 aaKnown RBP24.83■■□□□ 1.57
SH3D21-202ENST00000474766 KIAA1551Q9HCM1 1747 aa24.83■■□□□ 1.57
SH3D21-202ENST00000474766 NDUFB9Q9Y6M9 179 aa24.83■■□□□ 1.57
SH3D21-202ENST00000474766 IL15P40933 162 aaPredicted RBP24.83■■□□□ 1.56
SH3D21-202ENST00000474766 MCMDC2Q4G0Z9 681 aa24.83■■□□□ 1.56
SH3D21-202ENST00000474766 KBTBD3Q8NAB2 608 aa24.83■■□□□ 1.56
SH3D21-202ENST00000474766 NLGN2Q8NFZ4 835 aa24.83■■□□□ 1.56
SH3D21-202ENST00000474766 NIP7Q9Y221 180 aaKnown RBP eCLIP24.83■■□□□ 1.56
SH3D21-202ENST00000474766 GOLGB1Q14789 3259 aaKnown RBP24.83■■□□□ 1.56
SH3D21-202ENST00000474766 PTGS1P23219 599 aa24.82■■□□□ 1.56
SH3D21-202ENST00000474766 U3KPZ7 1027 aaPredicted RBP24.82■■□□□ 1.56
SH3D21-202ENST00000474766 ZNF34Q8IZ26 560 aa24.81■■□□□ 1.56
SH3D21-202ENST00000474766 CHMP3Q9Y3E7 222 aa24.81■■□□□ 1.56
SH3D21-202ENST00000474766 SH3TC1Q8TE82 1336 aa24.81■■□□□ 1.56
SH3D21-202ENST00000474766 ISCA1Q9BUE6 129 aa24.81■■□□□ 1.56
SH3D21-202ENST00000474766 NUP62CLQ9H1M0 184 aa24.81■■□□□ 1.56
SH3D21-202ENST00000474766 DDX41Q9UJV9 622 aaKnown RBP24.81■■□□□ 1.56
SH3D21-202ENST00000474766 CD2APQ9Y5K6 639 aa24.81■■□□□ 1.56
SH3D21-202ENST00000474766 UBN2Q6ZU65 1347 aa24.8■■□□□ 1.56
SH3D21-202ENST00000474766 ANKRD31Q8N7Z5 1873 aa24.8■■□□□ 1.56
SH3D21-202ENST00000474766 CIAO1O76071 339 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms