RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 C9orf84Q5VXU9 1444 aa3.86□□□□□ -1.79
CALD1-216ENST00000473714 DISP1Q96F81 1524 aa3.85□□□□□ -1.79
CALD1-216ENST00000473714 LRP6O75581 1613 aa3.85□□□□□ -1.79
CALD1-216ENST00000473714 PPP1R12BO60237 982 aaPredicted RBP3.85□□□□□ -1.79
CALD1-216ENST00000473714 RARAP10276 462 aa3.85□□□□□ -1.79
CALD1-216ENST00000473714 SKIP12755 728 aa3.85□□□□□ -1.79
CALD1-216ENST00000473714 HOXA10P31260 410 aaPredicted RBP3.85□□□□□ -1.79
CALD1-216ENST00000473714 NRLP54845 237 aa3.85□□□□□ -1.79
CALD1-216ENST00000473714 LCE5AQ5TCM9 118 aa3.85□□□□□ -1.79
CALD1-216ENST00000473714 MEX3CQ5U5Q3 659 aaKnown RBP3.85□□□□□ -1.79
CALD1-216ENST00000473714 BEND4Q6ZU67 534 aa3.85□□□□□ -1.79
CALD1-216ENST00000473714 ACAD11Q709F0 780 aa3.85□□□□□ -1.79
CALD1-216ENST00000473714 FAM46AQ96IP4 442 aaKnown RBP3.85□□□□□ -1.79
CALD1-216ENST00000473714 MYRFLQ96LU7 910 aa3.85□□□□□ -1.79
CALD1-216ENST00000473714 RBSNQ9H1K0 784 aa3.85□□□□□ -1.79
CALD1-216ENST00000473714 KCNF1Q9H3M0 494 aa3.85□□□□□ -1.79
CALD1-216ENST00000473714 ATG3Q9NT62 314 aa3.85□□□□□ -1.79
CALD1-216ENST00000473714 ZFATQ9P243 1243 aa3.85□□□□□ -1.79
CALD1-216ENST00000473714 LEMD3Q9Y2U8 911 aa3.85□□□□□ -1.79
CALD1-216ENST00000473714 BCL9LQ86UU0 1499 aa3.85□□□□□ -1.79
CALD1-216ENST00000473714 HECW1Q76N89 1606 aa3.84□□□□□ -1.79
CALD1-216ENST00000473714 ZNF142P52746 1687 aaPredicted RBP3.84□□□□□ -1.79
CALD1-216ENST00000473714 POLR1AO95602 1720 aaPredicted RBP3.84□□□□□ -1.79
CALD1-216ENST00000473714 SART1O43290 800 aaKnown RBP3.84□□□□□ -1.79
CALD1-216ENST00000473714 SASH3O75995 380 aa3.84□□□□□ -1.79
CALD1-216ENST00000473714 GHRHP01286 108 aa3.84□□□□□ -1.79
CALD1-216ENST00000473714 SOX11P35716 441 aa3.84□□□□□ -1.79
CALD1-216ENST00000473714 WASHC4Q2M389 1173 aa3.84□□□□□ -1.79
CALD1-216ENST00000473714 FAM20CQ8IXL6 584 aa3.84□□□□□ -1.79
CALD1-216ENST00000473714 CACTIN-AS1Q8N1I8 211 aa3.84□□□□□ -1.79
CALD1-216ENST00000473714 FNBP4Q8N3X1 1017 aaPredicted RBP3.84□□□□□ -1.79
CALD1-216ENST00000473714 IFT43Q96FT9 208 aa3.84□□□□□ -1.79
CALD1-216ENST00000473714 NGLY1Q96IV0 654 aa3.84□□□□□ -1.79
CALD1-216ENST00000473714 C11orf16Q9NQ32 467 aa3.84□□□□□ -1.79
CALD1-216ENST00000473714 CCDC39Q9UFE4 941 aa3.84□□□□□ -1.79
CALD1-216ENST00000473714 CEP350Q5VT06 3117 aa3.84□□□□□ -1.79
CALD1-216ENST00000473714 CDK13Q14004 1512 aaKnown RBP3.84□□□□□ -1.8
CALD1-216ENST00000473714 XIRP1Q702N8 1843 aaKnown RBP3.84□□□□□ -1.8
CALD1-216ENST00000473714 LOC102724428A0A0B4J2F2 783 aa3.83□□□□□ -1.8
CALD1-216ENST00000473714 KRTAP9-7A8MTY7 169 aa3.83□□□□□ -1.8
CALD1-216ENST00000473714 TGFBR3LH3BV60 316 aa3.83□□□□□ -1.8
CALD1-216ENST00000473714 PPP1R15AO75807 674 aaPredicted RBP3.83□□□□□ -1.8
CALD1-216ENST00000473714 FARP2O94887 1054 aaPredicted RBP3.83□□□□□ -1.8
CALD1-216ENST00000473714 BMP3P12645 472 aa3.83□□□□□ -1.8
CALD1-216ENST00000473714 RFX1P22670 979 aa3.83□□□□□ -1.8
CALD1-216ENST00000473714 CD68P34810 354 aaPredicted RBP3.83□□□□□ -1.8
CALD1-216ENST00000473714 SIK1P57059 783 aa3.83□□□□□ -1.8
CALD1-216ENST00000473714 VSIG10LQ86VR7 867 aa3.83□□□□□ -1.8
CALD1-216ENST00000473714 TRIM50Q86XT4 487 aa3.83□□□□□ -1.8
CALD1-216ENST00000473714 TPCN2Q8NHX9 752 aa3.83□□□□□ -1.8
CALD1-216ENST00000473714 GLMNQ92990 594 aa3.83□□□□□ -1.8
CALD1-216ENST00000473714 PPME1Q9Y570 386 aa3.83□□□□□ -1.8
CALD1-216ENST00000473714 CNTLNQ9NXG0 1405 aa3.83□□□□□ -1.8
CALD1-216ENST00000473714 AGLP35573 1532 aa3.83□□□□□ -1.8
CALD1-216ENST00000473714 SYNMO15061 1565 aa3.83□□□□□ -1.8
CALD1-216ENST00000473714 NWD1Q149M9 1564 aa3.83□□□□□ -1.8
CALD1-216ENST00000473714 NEURL4Q96JN8 1562 aa3.83□□□□□ -1.8
CALD1-216ENST00000473714 MYO3AQ8NEV4 1616 aa3.83□□□□□ -1.8
CALD1-216ENST00000473714 ABCA8O94911 1581 aa3.82□□□□□ -1.8
CALD1-216ENST00000473714 IQGAP2Q13576 1575 aa3.82□□□□□ -1.8
CALD1-216ENST00000473714 CEP170BQ9Y4F5 1589 aaPredicted RBP3.82□□□□□ -1.8
CALD1-216ENST00000473714 FGD6Q6ZV73 1430 aa3.82□□□□□ -1.8
CALD1-216ENST00000473714 USP17L5A8MUK1 530 aa3.82□□□□□ -1.8
CALD1-216ENST00000473714 J3QW42 95 aa3.82□□□□□ -1.8
CALD1-216ENST00000473714 ZNF865P0CJ78 1059 aaPredicted RBP3.82□□□□□ -1.8
CALD1-216ENST00000473714 GRNP28799 593 aaKnown RBP3.82□□□□□ -1.8
CALD1-216ENST00000473714 CLDN10P78369 228 aa3.82□□□□□ -1.8
CALD1-216ENST00000473714 DUOXA2Q1HG44 320 aa3.82□□□□□ -1.8
CALD1-216ENST00000473714 KRTAP19-4Q3LI73 84 aa3.82□□□□□ -1.8
CALD1-216ENST00000473714 COL13A1Q5TAT6 717 aaPredicted RBP3.82□□□□□ -1.8
CALD1-216ENST00000473714 HDGFL1Q5TGJ6 251 aa3.82□□□□□ -1.8
CALD1-216ENST00000473714 RETREG2Q8NC44 543 aa3.82□□□□□ -1.8
CALD1-216ENST00000473714 AGBL5Q8NDL9 886 aa3.82□□□□□ -1.8
CALD1-216ENST00000473714 MFSD14AQ96MC6 490 aa3.82□□□□□ -1.8
CALD1-216ENST00000473714 TRAIPQ9BWF2 469 aa3.82□□□□□ -1.8
CALD1-216ENST00000473714 QTRT2Q9H974 415 aaKnown RBP3.82□□□□□ -1.8
CALD1-216ENST00000473714 TLR7Q9NYK1 1049 aaKnown RBP3.82□□□□□ -1.8
CALD1-216ENST00000473714 ROBO1Q9Y6N7 1651 aa3.81□□□□□ -1.8
CALD1-216ENST00000473714 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.81□□□□□ -1.8
CALD1-216ENST00000473714 AFF2P51816 1311 aa3.81□□□□□ -1.8
CALD1-216ENST00000473714 PATL2C9JE40 543 aaKnown RBP3.81□□□□□ -1.8
CALD1-216ENST00000473714 LINC01387J3KSC0 135 aa3.81□□□□□ -1.8
CALD1-216ENST00000473714 BIN1O00499 593 aa3.81□□□□□ -1.8
CALD1-216ENST00000473714 ZBTB7BO15156 539 aaPredicted RBP3.81□□□□□ -1.8
CALD1-216ENST00000473714 C21orf2O43822 256 aa3.81□□□□□ -1.8
CALD1-216ENST00000473714 WISP1O95388 367 aa3.81□□□□□ -1.8
CALD1-216ENST00000473714 PRNPP04156 253 aa3.81□□□□□ -1.8
CALD1-216ENST00000473714 PSAPP07602 524 aa3.81□□□□□ -1.8
CALD1-216ENST00000473714 FOSL1P15407 271 aa3.81□□□□□ -1.8
CALD1-216ENST00000473714 ATP1A2P50993 1020 aa3.81□□□□□ -1.8
CALD1-216ENST00000473714 RTN1Q16799 776 aa3.81□□□□□ -1.8
CALD1-216ENST00000473714 MSMPQ1L6U9 139 aa3.81□□□□□ -1.8
CALD1-216ENST00000473714 TMCO4Q5TGY1 634 aa3.81□□□□□ -1.8
CALD1-216ENST00000473714 CCDC102BQ68D86 513 aa3.81□□□□□ -1.8
CALD1-216ENST00000473714 KRTAP5-3Q6L8H2 238 aa3.81□□□□□ -1.8
CALD1-216ENST00000473714 KIAA1211Q6ZU35 1233 aa3.81□□□□□ -1.8
CALD1-216ENST00000473714 KSR1Q8IVT5 923 aa3.81□□□□□ -1.8
CALD1-216ENST00000473714 STAG2Q8N3U4 1231 aa3.81□□□□□ -1.8
CALD1-216ENST00000473714 GALNT11Q8NCW6 608 aa3.81□□□□□ -1.8
CALD1-216ENST00000473714 OSBPL1AQ9BXW6 950 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms