RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 AGBL3Q8NEM8 1001 aa11.19□□□□□ -0.62
SMG5-203ENST00000473643 TRPM4Q8TD43 1214 aa11.19□□□□□ -0.62
SMG5-203ENST00000473643 COA1Q9GZY4 146 aa11.19□□□□□ -0.62
SMG5-203ENST00000473643 AKAP2Q9Y2D5 859 aa11.19□□□□□ -0.62
SMG5-203ENST00000473643 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.19□□□□□ -0.62
SMG5-203ENST00000473643 USP17L3A6NCW0 530 aa11.18□□□□□ -0.62
SMG5-203ENST00000473643 USP17L4A6NCW7 530 aa11.18□□□□□ -0.62
SMG5-203ENST00000473643 TRAF5O00463 557 aa11.18□□□□□ -0.62
SMG5-203ENST00000473643 EGFRP00533 1210 aa11.18□□□□□ -0.62
SMG5-203ENST00000473643 FMR1Q06787 632 aaKnown RBP eCLIP11.18□□□□□ -0.62
SMG5-203ENST00000473643 UBE4AQ14139 1066 aa11.18□□□□□ -0.62
SMG5-203ENST00000473643 TNNI3KQ59H18 835 aa11.18□□□□□ -0.62
SMG5-203ENST00000473643 CST9Q5W186 159 aa11.18□□□□□ -0.62
SMG5-203ENST00000473643 C15orf52Q6ZUT6 534 aaKnown RBP11.18□□□□□ -0.62
SMG5-203ENST00000473643 USP17L1Q7RTZ2 530 aa11.18□□□□□ -0.62
SMG5-203ENST00000473643 EAF2Q96CJ1 260 aaPredicted RBP11.18□□□□□ -0.62
SMG5-203ENST00000473643 FPGT-TNNI3KV9GXZ4 949 aa11.18□□□□□ -0.62
SMG5-203ENST00000473643 ZNF609O15014 1411 aa11.18□□□□□ -0.62
SMG5-203ENST00000473643 IRS2Q9Y4H2 1338 aa11.17□□□□□ -0.62
SMG5-203ENST00000473643 RASSF10A6NK89 507 aa11.17□□□□□ -0.62
SMG5-203ENST00000473643 APBB1O00213 710 aa11.17□□□□□ -0.62
SMG5-203ENST00000473643 SMARCA5O60264 1052 aaPredicted RBP11.17□□□□□ -0.62
SMG5-203ENST00000473643 TAF5LO75529 589 aa11.17□□□□□ -0.62
SMG5-203ENST00000473643 KLRK1P26718 216 aa11.17□□□□□ -0.62
SMG5-203ENST00000473643 PUM3Q15397 648 aaKnown RBP11.17□□□□□ -0.62
SMG5-203ENST00000473643 TBC1D10BQ4KMP7 808 aaPredicted RBP11.17□□□□□ -0.62
SMG5-203ENST00000473643 DACT2Q5SW24 774 aa11.17□□□□□ -0.62
SMG5-203ENST00000473643 STRIP1Q5VSL9 837 aa11.17□□□□□ -0.62
SMG5-203ENST00000473643 CDC37L1Q7L3B6 337 aa11.17□□□□□ -0.62
SMG5-203ENST00000473643 HELBQ8NG08 1087 aaPredicted RBP11.17□□□□□ -0.62
SMG5-203ENST00000473643 LPIN2Q92539 896 aa11.17□□□□□ -0.62
SMG5-203ENST00000473643 IL1RAPL2Q9NP60 686 aa11.17□□□□□ -0.62
SMG5-203ENST00000473643 ZBTB47Q9UFB7 747 aaPredicted RBP11.17□□□□□ -0.62
SMG5-203ENST00000473643 MKRN1Q9UHC7 482 aaKnown RBP11.17□□□□□ -0.62
SMG5-203ENST00000473643 CNTNAP1P78357 1384 aa11.16□□□□□ -0.62
SMG5-203ENST00000473643 SALL3Q9BXA9 1300 aa11.16□□□□□ -0.62
SMG5-203ENST00000473643 A0A1B0GUL7 405 aa11.16□□□□□ -0.62
SMG5-203ENST00000473643 SNAP23O00161 211 aa11.16□□□□□ -0.62
SMG5-203ENST00000473643 ZBTB22O15209 634 aa11.16□□□□□ -0.62
SMG5-203ENST00000473643 USP17L8P0C7I0 530 aa11.16□□□□□ -0.62
SMG5-203ENST00000473643 TIMM10P62072 90 aa11.16□□□□□ -0.62
SMG5-203ENST00000473643 ATP2B3Q16720 1220 aa11.16□□□□□ -0.62
SMG5-203ENST00000473643 RBM26Q5T8P6 1007 aaKnown RBP11.16□□□□□ -0.62
SMG5-203ENST00000473643 GLIS2Q9BZE0 524 aaPredicted RBP11.16□□□□□ -0.62
SMG5-203ENST00000473643 LNPKQ9C0E8 428 aa11.16□□□□□ -0.62
SMG5-203ENST00000473643 PDE4AP27815 886 aa11.15□□□□□ -0.62
SMG5-203ENST00000473643 KCNJ4P48050 445 aa11.15□□□□□ -0.62
SMG5-203ENST00000473643 VEGFBP49765 207 aa11.15□□□□□ -0.62
SMG5-203ENST00000473643 MMP14P50281 582 aa11.15□□□□□ -0.62
SMG5-203ENST00000473643 DEFB115Q30KQ5 88 aa11.15□□□□□ -0.62
SMG5-203ENST00000473643 TTLL5Q6EMB2 1281 aa11.15□□□□□ -0.62
SMG5-203ENST00000473643 USP48Q86UV5 1035 aa11.15□□□□□ -0.62
SMG5-203ENST00000473643 AACSQ86V21 672 aa11.15□□□□□ -0.62
SMG5-203ENST00000473643 OSBPL3Q9H4L5 887 aa11.15□□□□□ -0.62
SMG5-203ENST00000473643 CD209Q9NNX6 404 aa11.15□□□□□ -0.62
SMG5-203ENST00000473643 STAP2Q9UGK3 403 aa11.15□□□□□ -0.62
SMG5-203ENST00000473643 IFIT2P09913 472 aaKnown RBP11.14□□□□□ -0.63
SMG5-203ENST00000473643 IFIT1P09914 478 aaKnown RBP11.14□□□□□ -0.63
SMG5-203ENST00000473643 SLC5A1P13866 664 aa11.14□□□□□ -0.63
SMG5-203ENST00000473643 IL1R1P14778 569 aa11.14□□□□□ -0.63
SMG5-203ENST00000473643 KIF4BQ2VIQ3 1234 aa11.14□□□□□ -0.63
SMG5-203ENST00000473643 XAGE2Q96GT9 111 aa11.14□□□□□ -0.63
SMG5-203ENST00000473643 ZNF512BQ96KM6 892 aaPredicted RBP11.14□□□□□ -0.63
SMG5-203ENST00000473643 MXD3Q9BW11 206 aa11.14□□□□□ -0.63
SMG5-203ENST00000473643 CCDC8Q9H0W5 538 aaPredicted RBP11.14□□□□□ -0.63
SMG5-203ENST00000473643 DBNLQ9UJU6 430 aaKnown RBP11.14□□□□□ -0.63
SMG5-203ENST00000473643 SCN9AQ15858 1988 aa11.14□□□□□ -0.63
SMG5-203ENST00000473643 MYO3BQ8WXR4 1341 aa11.13□□□□□ -0.63
SMG5-203ENST00000473643 CELF2O95319 508 aaKnown RBP11.13□□□□□ -0.63
SMG5-203ENST00000473643 GTF2IP78347 998 aa11.13□□□□□ -0.63
SMG5-203ENST00000473643 SCARF1Q14162 830 aa11.13□□□□□ -0.63
SMG5-203ENST00000473643 KRT26Q7Z3Y9 468 aa11.13□□□□□ -0.63
SMG5-203ENST00000473643 FBXO33Q7Z6M2 555 aa11.13□□□□□ -0.63
SMG5-203ENST00000473643 SAPCD2Q86UD0 394 aa11.13□□□□□ -0.63
SMG5-203ENST00000473643 PLEKHM2Q8IWE5 1019 aa11.13□□□□□ -0.63
SMG5-203ENST00000473643 OTUD7AQ8TE49 926 aaPredicted RBP11.13□□□□□ -0.63
SMG5-203ENST00000473643 DCPSQ96C86 337 aaKnown RBP11.13□□□□□ -0.63
SMG5-203ENST00000473643 NEUROD6Q96NK8 337 aa11.13□□□□□ -0.63
SMG5-203ENST00000473643 DBNDD2Q9BQY9 259 aa11.13□□□□□ -0.63
SMG5-203ENST00000473643 MYOZ2Q9NPC6 264 aa11.13□□□□□ -0.63
SMG5-203ENST00000473643 ABT1Q9ULW3 272 aaKnown RBP11.13□□□□□ -0.63
SMG5-203ENST00000473643 TLL2Q9Y6L7 1015 aa11.13□□□□□ -0.63
SMG5-203ENST00000473643 ASTN2O75129 1339 aaPredicted RBP11.12□□□□□ -0.63
SMG5-203ENST00000473643 AOX1Q06278 1338 aa11.12□□□□□ -0.63
SMG5-203ENST00000473643 TTC41PQ6P2S7 1318 aa11.12□□□□□ -0.63
SMG5-203ENST00000473643 MX1P20591 662 aa11.12□□□□□ -0.63
SMG5-203ENST00000473643 ADORA1P30542 326 aa11.12□□□□□ -0.63
SMG5-203ENST00000473643 PDE1AP54750 535 aa11.12□□□□□ -0.63
SMG5-203ENST00000473643 DLK2Q6UY11 383 aa11.12□□□□□ -0.63
SMG5-203ENST00000473643 ZNF804AQ7Z570 1209 aa11.12□□□□□ -0.63
SMG5-203ENST00000473643 OGFOD1Q8N543 542 aa11.12□□□□□ -0.63
SMG5-203ENST00000473643 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.12□□□□□ -0.63
SMG5-203ENST00000473643 FAM84BQ96KN1 310 aaPredicted RBP11.12□□□□□ -0.63
SMG5-203ENST00000473643 ECHDC1Q9NTX5 307 aa11.12□□□□□ -0.63
SMG5-203ENST00000473643 TLR7Q9NYK1 1049 aaKnown RBP11.12□□□□□ -0.63
SMG5-203ENST00000473643 ATP5JP18859 108 aa11.11□□□□□ -0.63
SMG5-203ENST00000473643 NBPF9Q3BBW0 867 aa11.11□□□□□ -0.63
SMG5-203ENST00000473643 CAVIN4Q5BKX8 364 aa11.11□□□□□ -0.63
SMG5-203ENST00000473643 CCDC158Q5M9N0 1113 aa11.11□□□□□ -0.63
SMG5-203ENST00000473643 CCDC102BQ68D86 513 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms