RNA–Protein interactions for RNA: ENST00000473230.1

RCL1-209, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 3

Gene RCL1, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-209ENST00000473230 ZNF853P0CG23 659 aa8.82□□□□□ -1
RCL1-209ENST00000473230 PDE6BP35913 854 aa8.82□□□□□ -1
RCL1-209ENST00000473230 BRPF1P55201 1214 aaPredicted RBP8.82□□□□□ -1
RCL1-209ENST00000473230 HDAC1Q13547 482 aaPredicted RBP8.82□□□□□ -1
RCL1-209ENST00000473230 MSS51Q4VC12 460 aa8.82□□□□□ -1
RCL1-209ENST00000473230 CLEC4GQ6UXB4 293 aa8.82□□□□□ -1
RCL1-209ENST00000473230 CNBD1Q8NA66 436 aa8.82□□□□□ -1
RCL1-209ENST00000473230 IRF7Q92985 503 aa8.82□□□□□ -1
RCL1-209ENST00000473230 REPIN1Q9BWE0 567 aaKnown RBP8.82□□□□□ -1
RCL1-209ENST00000473230 MBIPQ9NS73 344 aa8.82□□□□□ -1
RCL1-209ENST00000473230 BABAM1Q9NWV8 329 aa8.82□□□□□ -1
RCL1-209ENST00000473230 USP16Q9Y5T5 823 aa8.82□□□□□ -1
RCL1-209ENST00000473230 GOLGB1Q14789 3259 aaKnown RBP8.82□□□□□ -1
RCL1-209ENST00000473230 ATP10DQ9P241 1426 aa8.81□□□□□ -1
RCL1-209ENST00000473230 TRIM66O15016 1216 aa8.81□□□□□ -1
RCL1-209ENST00000473230 VAMP4O75379 141 aa8.81□□□□□ -1
RCL1-209ENST00000473230 TWISTNBQ3B726 338 aaPredicted RBP8.81□□□□□ -1
RCL1-209ENST00000473230 ARHGAP45Q92619 1136 aa8.81□□□□□ -1
RCL1-209ENST00000473230 BRIP1Q9BX63 1249 aa8.81□□□□□ -1
RCL1-209ENST00000473230 MIS18AQ9NYP9 233 aa8.81□□□□□ -1
RCL1-209ENST00000473230 TSPYL4Q9UJ04 414 aa8.81□□□□□ -1
RCL1-209ENST00000473230 CAMTA2O94983 1202 aa8.8□□□□□ -1
RCL1-209ENST00000473230 CHRNA5P30532 468 aa8.8□□□□□ -1
RCL1-209ENST00000473230 GCGRP47871 477 aa8.8□□□□□ -1
RCL1-209ENST00000473230 VEGFBP49765 207 aa8.8□□□□□ -1
RCL1-209ENST00000473230 C1QTNF8P60827 252 aa8.8□□□□□ -1
RCL1-209ENST00000473230 EIF4A1P60842 406 aaKnown RBP8.8□□□□□ -1
RCL1-209ENST00000473230 AMHR2Q16671 573 aa8.8□□□□□ -1
RCL1-209ENST00000473230 TBC1D9BQ66K14 1250 aa8.8□□□□□ -1
RCL1-209ENST00000473230 KIF6Q6ZMV9 814 aa8.8□□□□□ -1
RCL1-209ENST00000473230 NBPF5PQ86XG9 351 aaPredicted RBP8.8□□□□□ -1
RCL1-209ENST00000473230 C2CD5Q86YS7 1000 aa8.8□□□□□ -1
RCL1-209ENST00000473230 TTLL6Q8N841 843 aa8.8□□□□□ -1
RCL1-209ENST00000473230 API5Q9BZZ5 524 aaKnown RBP8.8□□□□□ -1
RCL1-209ENST00000473230 UBR2Q8IWV8 1755 aa8.8□□□□□ -1
RCL1-209ENST00000473230 ERBB4Q15303 1308 aa8.8□□□□□ -1
RCL1-209ENST00000473230 MYH14Q7Z406 1995 aaKnown RBP8.79□□□□□ -1
RCL1-209ENST00000473230 ELL2O00472 640 aaPredicted RBP8.79□□□□□ -1
RCL1-209ENST00000473230 KCNA3P22001 575 aa8.79□□□□□ -1
RCL1-209ENST00000473230 GTF2E1P29083 439 aaPredicted RBP8.79□□□□□ -1
RCL1-209ENST00000473230 TPTE2Q6XPS3 522 aa8.79□□□□□ -1
RCL1-209ENST00000473230 CCDC24Q8N4L8 307 aa8.79□□□□□ -1
RCL1-209ENST00000473230 TSPYL6Q8N831 410 aa8.79□□□□□ -1
RCL1-209ENST00000473230 ZNF526Q8TF50 670 aaPredicted RBP8.79□□□□□ -1
RCL1-209ENST00000473230 UPF2Q9HAU5 1272 aaKnown RBP8.79□□□□□ -1
RCL1-209ENST00000473230 ZBTB40Q9NUA8 1239 aa8.79□□□□□ -1
RCL1-209ENST00000473230 ABCC4O15439 1325 aa8.79□□□□□ -1
RCL1-209ENST00000473230 CHD4Q14839 1912 aa8.78□□□□□ -1
RCL1-209ENST00000473230 ADCY9O60503 1353 aa8.78□□□□□ -1
RCL1-209ENST00000473230 PRAMEF22A3QJZ6 481 aa8.78□□□□□ -1
RCL1-209ENST00000473230 ERVV-1B6SEH8 477 aa8.78□□□□□ -1
RCL1-209ENST00000473230 CD46P15529 392 aa8.78□□□□□ -1
RCL1-209ENST00000473230 PIP4K2AP48426 406 aaPredicted RBP8.78□□□□□ -1
RCL1-209ENST00000473230 GRIPAP1Q4V328 841 aa8.78□□□□□ -1
RCL1-209ENST00000473230 SOGA3Q5TF21 947 aa8.78□□□□□ -1
RCL1-209ENST00000473230 PRR5LQ6MZQ0 368 aa8.78□□□□□ -1
RCL1-209ENST00000473230 SMC5Q8IY18 1101 aa8.78□□□□□ -1
RCL1-209ENST00000473230 C8orf58Q8NAV2 365 aa8.78□□□□□ -1
RCL1-209ENST00000473230 CNKSR1Q969H4 720 aa8.78□□□□□ -1
RCL1-209ENST00000473230 ZNF622Q969S3 477 aaKnown RBP eCLIP8.78□□□□□ -12e-9■□□□□ 10
RCL1-209ENST00000473230 NYXQ9GZU5 481 aa8.78□□□□□ -1
RCL1-209ENST00000473230 FAM217BQ9NTX9 383 aaPredicted RBP8.78□□□□□ -1
RCL1-209ENST00000473230 NIP7Q9Y221 180 aaKnown RBP eCLIP8.78□□□□□ -1
RCL1-209ENST00000473230 ZC3H4Q9UPT8 1303 aaKnown RBP8.78□□□□□ -1
RCL1-209ENST00000473230 ALDH1A1P00352 501 aa8.77□□□□□ -1.01
RCL1-209ENST00000473230 C9orf131Q5VYM1 1079 aa8.77□□□□□ -1.01
RCL1-209ENST00000473230 NBPF10Q6P3W6 841 aaKnown RBP8.77□□□□□ -1.01
RCL1-209ENST00000473230 NBPF15Q8N660 670 aa8.77□□□□□ -1.01
RCL1-209ENST00000473230 SIPA1L3O60292 1781 aaPredicted RBP8.76□□□□□ -1.01
RCL1-209ENST00000473230 KIF13BQ9NQT8 1826 aa8.76□□□□□ -1.01
RCL1-209ENST00000473230 MYL6BP14649 208 aa8.76□□□□□ -1.01
RCL1-209ENST00000473230 EIF2S2P20042 333 aaKnown RBP8.76□□□□□ -1.01
RCL1-209ENST00000473230 LMNB1P20700 586 aa8.76□□□□□ -1.01
RCL1-209ENST00000473230 LORP23490 312 aaPredicted RBP8.76□□□□□ -1.01
RCL1-209ENST00000473230 STYK1Q6J9G0 422 aa8.76□□□□□ -1.01
RCL1-209ENST00000473230 GIGYF2Q6Y7W6 1299 aaKnown RBP8.76□□□□□ -1.01
RCL1-209ENST00000473230 MASTLQ96GX5 879 aa8.76□□□□□ -1.01
RCL1-209ENST00000473230 CHMP4AQ9BY43 222 aa8.76□□□□□ -1.01
RCL1-209ENST00000473230 RNF181Q9P0P0 153 aa8.76□□□□□ -1.01
RCL1-209ENST00000473230 MAP3K15Q6ZN16 1313 aa8.76□□□□□ -1.01
RCL1-209ENST00000473230 CHL1O00533 1208 aa8.75□□□□□ -1.01
RCL1-209ENST00000473230 HOXB7P09629 217 aa8.75□□□□□ -1.01
RCL1-209ENST00000473230 BMP1P13497 986 aa8.75□□□□□ -1.01
RCL1-209ENST00000473230 SSTR3P32745 418 aaPredicted RBP8.75□□□□□ -1.01
RCL1-209ENST00000473230 MMP16P51512 607 aa8.75□□□□□ -1.01
RCL1-209ENST00000473230 PDE4DQ08499 809 aa8.75□□□□□ -1.01
RCL1-209ENST00000473230 BECN1Q14457 450 aa8.75□□□□□ -1.01
RCL1-209ENST00000473230 Q3C1V9 767 aa8.75□□□□□ -1.01
RCL1-209ENST00000473230 TPRNQ4KMQ1 711 aa8.75□□□□□ -1.01
RCL1-209ENST00000473230 HSP90AB3PQ58FF7 597 aa8.75□□□□□ -1.01
RCL1-209ENST00000473230 PARP9Q8IXQ6 854 aa8.75□□□□□ -1.01
RCL1-209ENST00000473230 C16orf71Q8IYS4 520 aaPredicted RBP8.75□□□□□ -1.01
RCL1-209ENST00000473230 SCN7AQ01118 1682 aa8.75□□□□□ -1.01
RCL1-209ENST00000473230 FAM177BA6PVY3 158 aa8.74□□□□□ -1.01
RCL1-209ENST00000473230 ZBTB7BO15156 539 aaPredicted RBP8.74□□□□□ -1.01
RCL1-209ENST00000473230 SRGNP10124 158 aa8.74□□□□□ -1.01
RCL1-209ENST00000473230 NPR1P16066 1061 aa8.74□□□□□ -1.01
RCL1-209ENST00000473230 ALDH1B1P30837 517 aa8.74□□□□□ -1.01
RCL1-209ENST00000473230 NUCB1Q02818 461 aa8.74□□□□□ -1.01
RCL1-209ENST00000473230 SUZ12Q15022 739 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms