RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 POLR3DP05423 398 aaPredicted RBP24.66■■□□□ 1.54
COL18A1-207ENST00000473212 A0A1B0GVL5 298 aa24.65■■□□□ 1.54
COL18A1-207ENST00000473212 ANO10Q9NW15 660 aa24.65■■□□□ 1.54
COL18A1-207ENST00000473212 SKILP12757 684 aa24.65■■□□□ 1.54
COL18A1-207ENST00000473212 SYCP1Q15431 976 aa24.65■■□□□ 1.54
COL18A1-207ENST00000473212 FAM89AQ96GI7 184 aa24.65■■□□□ 1.54
COL18A1-207ENST00000473212 PUS7LQ9H0K6 701 aaKnown RBP24.65■■□□□ 1.54
COL18A1-207ENST00000473212 LAMB4A4D0S4 1761 aa24.64■■□□□ 1.54
COL18A1-207ENST00000473212 RBM6P78332 1123 aaKnown RBP24.64■■□□□ 1.54
COL18A1-207ENST00000473212 TOM1L2Q6ZVM7 507 aa24.64■■□□□ 1.54
COL18A1-207ENST00000473212 PCDHA7Q9UN72 937 aa24.64■■□□□ 1.54
COL18A1-207ENST00000473212 NUP188Q5SRE5 1749 aa24.64■■□□□ 1.53
COL18A1-207ENST00000473212 ATL3Q6DD88 541 aa24.64■■□□□ 1.53
COL18A1-207ENST00000473212 AOPEPQ8N6M6 819 aa24.64■■□□□ 1.53
COL18A1-207ENST00000473212 ZCRB1Q8TBF4 217 aaKnown RBP24.64■■□□□ 1.53
COL18A1-207ENST00000473212 XAGE2Q96GT9 111 aa24.64■■□□□ 1.53
COL18A1-207ENST00000473212 CCDC69A6NI79 296 aa24.63■■□□□ 1.53
COL18A1-207ENST00000473212 NEMFO60524 1076 aa24.63■■□□□ 1.53
COL18A1-207ENST00000473212 GPR108Q9NPR9 543 aa24.63■■□□□ 1.53
COL18A1-207ENST00000473212 CLIC4Q9Y696 253 aa24.63■■□□□ 1.53
COL18A1-207ENST00000473212 NWD2Q9ULI1 1742 aa24.63■■□□□ 1.53
COL18A1-207ENST00000473212 TNS3Q68CZ2 1445 aa24.63■■□□□ 1.53
COL18A1-207ENST00000473212 FGAP02671 866 aa24.63■■□□□ 1.53
COL18A1-207ENST00000473212 ZAP70P43403 619 aa24.63■■□□□ 1.53
COL18A1-207ENST00000473212 CCDC191Q8NCU4 936 aa24.63■■□□□ 1.53
COL18A1-207ENST00000473212 CEP126Q9P2H0 1117 aa24.63■■□□□ 1.53
COL18A1-207ENST00000473212 CEP57L1Q8IYX8 460 aa24.62■■□□□ 1.53
COL18A1-207ENST00000473212 GORABQ5T7V8 394 aa24.62■■□□□ 1.53
COL18A1-207ENST00000473212 ZNF274Q96GC6 653 aaPredicted RBP24.62■■□□□ 1.53
COL18A1-207ENST00000473212 DNAJC5Q9H3Z4 198 aa24.62■■□□□ 1.53
COL18A1-207ENST00000473212 SPATA31A3Q5VYP0 1347 aa24.62■■□□□ 1.53
COL18A1-207ENST00000473212 TTC39AQ5SRH9 613 aa24.61■■□□□ 1.53
COL18A1-207ENST00000473212 ANTXR2P58335 489 aa24.61■■□□□ 1.53
COL18A1-207ENST00000473212 CCZ1BP86790 482 aa24.61■■□□□ 1.53
COL18A1-207ENST00000473212 CCZ1P86791 482 aaPredicted RBP24.61■■□□□ 1.53
COL18A1-207ENST00000473212 TRMT1Q9NXH9 659 aaKnown RBP24.61■■□□□ 1.53
COL18A1-207ENST00000473212 HPS5Q9UPZ3 1129 aa24.61■■□□□ 1.53
COL18A1-207ENST00000473212 NDUFA8P51970 172 aa24.6■■□□□ 1.53
COL18A1-207ENST00000473212 PTPN14Q15678 1187 aa24.6■■□□□ 1.53
COL18A1-207ENST00000473212 FMR1NBQ8N0W7 255 aaPredicted RBP24.6■■□□□ 1.53
COL18A1-207ENST00000473212 MRPS27Q92552 414 aaKnown RBP24.6■■□□□ 1.53
COL18A1-207ENST00000473212 SDF4Q9BRK5 362 aa24.6■■□□□ 1.53
COL18A1-207ENST00000473212 KCPQ6ZWJ8 1503 aa24.6■■□□□ 1.53
COL18A1-207ENST00000473212 STRCP1A6NGW2 1772 aa24.6■■□□□ 1.53
COL18A1-207ENST00000473212 KLF18A0A0U1RQI7 1052 aa24.6■■□□□ 1.53
COL18A1-207ENST00000473212 CCDC57Q2TAC2 916 aa24.6■■□□□ 1.53
COL18A1-207ENST00000473212 FEZ1Q99689 392 aa24.6■■□□□ 1.53
COL18A1-207ENST00000473212 GTPBP4Q9BZE4 634 aaKnown RBP24.6■■□□□ 1.53
COL18A1-207ENST00000473212 PRDM11Q9NQV5 511 aa24.6■■□□□ 1.53
COL18A1-207ENST00000473212 PRC1O43663 620 aa24.59■■□□□ 1.53
COL18A1-207ENST00000473212 NYAP1Q6ZVC0 841 aa24.59■■□□□ 1.53
COL18A1-207ENST00000473212 AIFM3Q96NN9 605 aa24.59■■□□□ 1.53
COL18A1-207ENST00000473212 CTNNA3Q9UI47 895 aa24.59■■□□□ 1.53
COL18A1-207ENST00000473212 KIF28PB7ZC32 967 aa24.59■■□□□ 1.53
COL18A1-207ENST00000473212 PCDH11XQ9BZA7 1347 aa24.58■■□□□ 1.53
COL18A1-207ENST00000473212 PCDH11YQ9BZA8 1340 aa24.58■■□□□ 1.53
COL18A1-207ENST00000473212 GOLGA8BA8MQT2 603 aa24.58■■□□□ 1.53
COL18A1-207ENST00000473212 RXRAP19793 462 aa24.58■■□□□ 1.53
COL18A1-207ENST00000473212 NAT10Q9H0A0 1025 aaKnown RBP24.58■■□□□ 1.53
COL18A1-207ENST00000473212 RTEL1Q9NZ71 1219 aa24.58■■□□□ 1.52
COL18A1-207ENST00000473212 CGNQ9P2M7 1197 aaKnown RBP24.58■■□□□ 1.52
COL18A1-207ENST00000473212 CIAO1O76071 339 aa24.57■■□□□ 1.52
COL18A1-207ENST00000473212 ADALQ6DHV7 355 aa24.57■■□□□ 1.52
COL18A1-207ENST00000473212 BIN1O00499 593 aa24.57■■□□□ 1.52
COL18A1-207ENST00000473212 CCDC158Q5M9N0 1113 aa24.57■■□□□ 1.52
COL18A1-207ENST00000473212 MB21D2Q8IYB1 491 aaPredicted RBP24.57■■□□□ 1.52
COL18A1-207ENST00000473212 ISCA1Q9BUE6 129 aa24.57■■□□□ 1.52
COL18A1-207ENST00000473212 OGFRQ9NZT2 677 aa24.57■■□□□ 1.52
COL18A1-207ENST00000473212 NEDD4P46934 1319 aa24.56■■□□□ 1.52
COL18A1-207ENST00000473212 GPTP24298 496 aa24.56■■□□□ 1.52
COL18A1-207ENST00000473212 DPCR1Q3MIW9 517 aa24.56■■□□□ 1.52
COL18A1-207ENST00000473212 LINC00301Q8NCQ3 95 aa24.56■■□□□ 1.52
COL18A1-207ENST00000473212 STRN4Q9NRL3 753 aa24.56■■□□□ 1.52
COL18A1-207ENST00000473212 SF3A1Q15459 793 aaKnown RBP24.56■■□□□ 1.52
COL18A1-207ENST00000473212 NBPF11Q86T75 865 aa24.56■■□□□ 1.52
COL18A1-207ENST00000473212 CCAR2Q8N163 923 aaKnown RBP24.56■■□□□ 1.52
COL18A1-207ENST00000473212 C8orf76Q96K31 380 aa24.56■■□□□ 1.52
COL18A1-207ENST00000473212 ORC3Q9UBD5 711 aaPredicted RBP24.56■■□□□ 1.52
COL18A1-207ENST00000473212 STK38Q15208 465 aa24.55■■□□□ 1.52
COL18A1-207ENST00000473212 NBPF3Q9H094 633 aa24.55■■□□□ 1.52
COL18A1-207ENST00000473212 SENP2Q9HC62 589 aa24.55■■□□□ 1.52
COL18A1-207ENST00000473212 ZNF215Q9UL58 517 aaPredicted RBP24.55■■□□□ 1.52
COL18A1-207ENST00000473212 WDR17Q8IZU2 1322 aa24.55■■□□□ 1.52
COL18A1-207ENST00000473212 GPAA1O43292 621 aa24.55■■□□□ 1.52
COL18A1-207ENST00000473212 TCIRG1Q13488 830 aa24.55■■□□□ 1.52
COL18A1-207ENST00000473212 IMMTQ16891 758 aaKnown RBP24.55■■□□□ 1.52
COL18A1-207ENST00000473212 ISM2Q6H9L7 571 aa24.55■■□□□ 1.52
COL18A1-207ENST00000473212 TAF7LQ5H9L4 462 aa24.54■■□□□ 1.52
COL18A1-207ENST00000473212 KIAA1468Q9P260 1216 aa24.54■■□□□ 1.52
COL18A1-207ENST00000473212 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.54■■□□□ 1.528e-9■■□□□ 11.8
COL18A1-207ENST00000473212 V9GYY5 206 aaPredicted RBP24.54■■□□□ 1.52
COL18A1-207ENST00000473212 ABCC6O95255 1503 aa24.54■■□□□ 1.52
COL18A1-207ENST00000473212 A0A1W2PQ27 194 aa24.54■■□□□ 1.52
COL18A1-207ENST00000473212 A0A1W2PQ64 194 aa24.54■■□□□ 1.52
COL18A1-207ENST00000473212 A0A1W2PQD8 194 aa24.54■■□□□ 1.52
COL18A1-207ENST00000473212 MCAMP43121 646 aa24.54■■□□□ 1.52
COL18A1-207ENST00000473212 DNAJC10Q8IXB1 793 aa24.54■■□□□ 1.52
COL18A1-207ENST00000473212 INCENPQ9NQS7 918 aa24.54■■□□□ 1.52
COL18A1-207ENST00000473212 UBR2Q8IWV8 1755 aa24.53■■□□□ 1.52
COL18A1-207ENST00000473212 ERVV-2B6SEH9 535 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms