RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 BCO2Q9BYV7 579 aa12.15□□□□□ -0.46
SGCE-210ENST00000472326 SOX1O00570 391 aaPredicted RBP12.14□□□□□ -0.47
SGCE-210ENST00000472326 TM4SF5O14894 197 aa12.14□□□□□ -0.47
SGCE-210ENST00000472326 DDX3YO15523 660 aaKnown RBP12.14□□□□□ -0.47
SGCE-210ENST00000472326 FOXD4L6Q3SYB3 417 aaPredicted RBP12.14□□□□□ -0.47
SGCE-210ENST00000472326 EAPPQ56P03 285 aaPredicted RBP12.14□□□□□ -0.47
SGCE-210ENST00000472326 ALG1LQ6GMV1 187 aa12.14□□□□□ -0.47
SGCE-210ENST00000472326 NXPE4Q6UWF7 544 aa12.14□□□□□ -0.47
SGCE-210ENST00000472326 FOXD4L3Q6VB84 417 aaPredicted RBP12.14□□□□□ -0.47
SGCE-210ENST00000472326 MAP4K3Q8IVH8 894 aa12.14□□□□□ -0.47
SGCE-210ENST00000472326 NACC1Q96RE7 527 aa12.14□□□□□ -0.47
SGCE-210ENST00000472326 SRA1Q9HD15 236 aaKnown RBP12.14□□□□□ -0.47
SGCE-210ENST00000472326 SEC31BQ9NQW1 1179 aa12.14□□□□□ -0.47
SGCE-210ENST00000472326 KCNK4Q9NYG8 393 aa12.14□□□□□ -0.47
SGCE-210ENST00000472326 USP21Q9UK80 565 aa12.14□□□□□ -0.47
SGCE-210ENST00000472326 PIP4K2BP78356 416 aa12.13□□□□□ -0.47
SGCE-210ENST00000472326 LENG1Q96BZ8 264 aaPredicted RBP12.13□□□□□ -0.47
SGCE-210ENST00000472326 RNF19AQ9NV58 838 aa12.13□□□□□ -0.47
SGCE-210ENST00000472326 TRAK1Q9UPV9 953 aa12.13□□□□□ -0.47
SGCE-210ENST00000472326 TMEM238LA0A1B0GVL6 79 aa12.12□□□□□ -0.47
SGCE-210ENST00000472326 ESRRAP11474 423 aaPredicted RBP12.12□□□□□ -0.47
SGCE-210ENST00000472326 PRPF40BQ6NWY9 871 aaKnown RBP12.12□□□□□ -0.47
SGCE-210ENST00000472326 IGF2-ASQ6U949 168 aa12.12□□□□□ -0.47
SGCE-210ENST00000472326 FBF1Q8TES7 1133 aa12.12□□□□□ -0.47
SGCE-210ENST00000472326 C9orf172C9J069 976 aa12.11□□□□□ -0.47
SGCE-210ENST00000472326 CD68P34810 354 aaPredicted RBP12.11□□□□□ -0.47
SGCE-210ENST00000472326 FCGRTP55899 365 aa12.11□□□□□ -0.47
SGCE-210ENST00000472326 KLHL23Q8NBE8 558 aa12.11□□□□□ -0.47
SGCE-210ENST00000472326 CLEC4MQ9H2X3 399 aaPredicted RBP12.11□□□□□ -0.47
SGCE-210ENST00000472326 ZNF576Q9H609 170 aa12.11□□□□□ -0.47
SGCE-210ENST00000472326 ADAM11O75078 769 aa12.1□□□□□ -0.47
SGCE-210ENST00000472326 ITPKAP23677 461 aa12.1□□□□□ -0.47
SGCE-210ENST00000472326 NLRP12P59046 1061 aa12.1□□□□□ -0.47
SGCE-210ENST00000472326 PCDH1Q08174 1060 aa12.1□□□□□ -0.47
SGCE-210ENST00000472326 MBTPS1Q14703 1052 aa12.1□□□□□ -0.47
SGCE-210ENST00000472326 ZNF423Q2M1K9 1284 aa12.1□□□□□ -0.47
SGCE-210ENST00000472326 OSBPL7Q9BZF2 842 aa12.1□□□□□ -0.47
SGCE-210ENST00000472326 WISP1O95388 367 aa12.09□□□□□ -0.47
SGCE-210ENST00000472326 TAGLNQ01995 201 aaKnown RBP12.09□□□□□ -0.47
SGCE-210ENST00000472326 C19orf57Q0VDD7 668 aa12.09□□□□□ -0.47
SGCE-210ENST00000472326 COL19A1Q14993 1142 aa12.09□□□□□ -0.47
SGCE-210ENST00000472326 FOXD4L4Q8WXT5 416 aaPredicted RBP12.09□□□□□ -0.47
SGCE-210ENST00000472326 WNT8BQ93098 351 aa12.09□□□□□ -0.47
SGCE-210ENST00000472326 OSGEPQ9NPF4 335 aa12.09□□□□□ -0.47
SGCE-210ENST00000472326 PRPF40AO75400 957 aaKnown RBP12.08□□□□□ -0.48
SGCE-210ENST00000472326 ARL4DP49703 201 aa12.08□□□□□ -0.48
SGCE-210ENST00000472326 ADGRE1Q14246 886 aa12.08□□□□□ -0.48
SGCE-210ENST00000472326 SUZ12Q15022 739 aaKnown RBP12.08□□□□□ -0.48
SGCE-210ENST00000472326 DTHD1Q6ZMT9 781 aa12.08□□□□□ -0.48
SGCE-210ENST00000472326 UBASH3BQ8TF42 649 aa12.08□□□□□ -0.48
SGCE-210ENST00000472326 DUSP9Q99956 384 aaKnown RBP12.08□□□□□ -0.48
SGCE-210ENST00000472326 SPOCK3Q9BQ16 436 aa12.08□□□□□ -0.48
SGCE-210ENST00000472326 ALX3O95076 343 aa12.07□□□□□ -0.48
SGCE-210ENST00000472326 MFAP1P55081 439 aaKnown RBP12.07□□□□□ -0.48
SGCE-210ENST00000472326 FBXO33Q7Z6M2 555 aa12.07□□□□□ -0.48
SGCE-210ENST00000472326 AGGF1Q8N302 714 aaeCLIP12.07□□□□□ -0.48
SGCE-210ENST00000472326 PROCP04070 461 aa12.06□□□□□ -0.48
SGCE-210ENST00000472326 ZNF157P51786 506 aaPredicted RBP12.06□□□□□ -0.48
SGCE-210ENST00000472326 NRG1Q02297 640 aaPredicted RBP12.06□□□□□ -0.48
SGCE-210ENST00000472326 GSTM4Q03013 218 aa12.06□□□□□ -0.48
SGCE-210ENST00000472326 DCAF11Q8TEB1 546 aa12.06□□□□□ -0.48
SGCE-210ENST00000472326 MRPL18Q9H0U6 180 aaKnown RBP12.06□□□□□ -0.48
SGCE-210ENST00000472326 PPP4R2Q9NY27 417 aa12.06□□□□□ -0.48
SGCE-210ENST00000472326 SPG7Q9UQ90 795 aa12.06□□□□□ -0.48
SGCE-210ENST00000472326 MSTNO14793 375 aa12.05□□□□□ -0.48
SGCE-210ENST00000472326 GATA4P43694 442 aa12.05□□□□□ -0.48
SGCE-210ENST00000472326 IREB2P48200 963 aaKnown RBP12.05□□□□□ -0.48
SGCE-210ENST00000472326 FAAP100Q0VG06 881 aa12.05□□□□□ -0.48
SGCE-210ENST00000472326 ACAD11Q709F0 780 aa12.05□□□□□ -0.48
SGCE-210ENST00000472326 WFDC12Q8WWY7 111 aa12.05□□□□□ -0.48
SGCE-210ENST00000472326 AKAP2Q9Y2D5 859 aa12.05□□□□□ -0.48
SGCE-210ENST00000472326 NOS3P29474 1203 aa12.04□□□□□ -0.48
SGCE-210ENST00000472326 PTPN12Q05209 780 aaKnown RBP12.04□□□□□ -0.48
SGCE-210ENST00000472326 DUOXA2Q1HG44 320 aa12.04□□□□□ -0.48
SGCE-210ENST00000472326 TXNRD3Q86VQ6 643 aa12.04□□□□□ -0.48
SGCE-210ENST00000472326 F8W735 103 aaPredicted RBP12.03□□□□□ -0.48
SGCE-210ENST00000472326 B3GALT4O96024 378 aa12.03□□□□□ -0.48
SGCE-210ENST00000472326 ERCC3P19447 782 aa12.03□□□□□ -0.48
SGCE-210ENST00000472326 GNA15P30679 374 aa12.03□□□□□ -0.48
SGCE-210ENST00000472326 USP26Q9BXU7 913 aa12.03□□□□□ -0.48
SGCE-210ENST00000472326 SOX17Q9H6I2 414 aaPredicted RBP12.03□□□□□ -0.48
SGCE-210ENST00000472326 C12orf49Q9H741 205 aa12.03□□□□□ -0.48
SGCE-210ENST00000472326 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.02□□□□□ -0.49
SGCE-210ENST00000472326 C3orf58Q8NDZ4 430 aa12.02□□□□□ -0.49
SGCE-210ENST00000472326 FAM161BQ96MY7 647 aa12.02□□□□□ -0.49
SGCE-210ENST00000472326 AKTIPQ9H8T0 292 aa12.02□□□□□ -0.49
SGCE-210ENST00000472326 PARP2Q9UGN5 583 aa12.02□□□□□ -0.49
SGCE-210ENST00000472326 KIAA1211Q6ZU35 1233 aa12.01□□□□□ -0.49
SGCE-210ENST00000472326 USP17L7P0C7H9 530 aa12□□□□□ -0.49
SGCE-210ENST00000472326 TMEM130Q8N3G9 435 aa12□□□□□ -0.49
SGCE-210ENST00000472326 GPN3Q9UHW5 284 aaPredicted RBP12□□□□□ -0.49
SGCE-210ENST00000472326 GIPC1O14908 333 aa11.99□□□□□ -0.49
SGCE-210ENST00000472326 IGHA1P01876 353 aa11.99□□□□□ -0.49
SGCE-210ENST00000472326 XRCC5P13010 732 aaKnown RBP11.99□□□□□ -0.49
SGCE-210ENST00000472326 GSTT1P30711 240 aa11.99□□□□□ -0.49
SGCE-210ENST00000472326 DOC2BQ14184 412 aa11.99□□□□□ -0.49
SGCE-210ENST00000472326 RPS26P11Q5JNZ5 115 aaPredicted RBP11.99□□□□□ -0.49
SGCE-210ENST00000472326 TRIM56Q9BRZ2 755 aaKnown RBP11.99□□□□□ -0.49
SGCE-210ENST00000472326 BCL2L13Q9BXK5 485 aa11.99□□□□□ -0.49
SGCE-210ENST00000472326 SRCIN1Q9C0H9 1055 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms