RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 CHAF1AQ13111 956 aaPredicted RBP23.37■■□□□ 1.33
PSPC1-203ENST00000471658 KCNQ5Q9NR82 932 aa23.37■■□□□ 1.33
PSPC1-203ENST00000471658 PAG1Q9NWQ8 432 aa23.37■■□□□ 1.33
PSPC1-203ENST00000471658 AKAP11Q9UKA4 1901 aa23.36■■□□□ 1.33
PSPC1-203ENST00000471658 G3V3G9 751 aa23.36■■□□□ 1.33
PSPC1-203ENST00000471658 CYP2E1P05181 493 aaPredicted RBP23.36■■□□□ 1.33
PSPC1-203ENST00000471658 DCAF8Q5TAQ9 597 aa23.36■■□□□ 1.33
PSPC1-203ENST00000471658 TBC1D9Q6ZT07 1266 aa23.36■■□□□ 1.33
PSPC1-203ENST00000471658 COL4A5P29400 1685 aa23.35■■□□□ 1.33
PSPC1-203ENST00000471658 IARSP41252 1262 aaKnown RBP23.35■■□□□ 1.33
PSPC1-203ENST00000471658 LARGE2Q8N3Y3 721 aa23.35■■□□□ 1.33
PSPC1-203ENST00000471658 DENND2AQ9ULE3 1009 aa23.35■■□□□ 1.33
PSPC1-203ENST00000471658 ECE2O60344 883 aa23.34■■□□□ 1.33
PSPC1-203ENST00000471658 PIH1D3Q9NQM4 214 aaKnown RBP23.34■■□□□ 1.33
PSPC1-203ENST00000471658 SEMA3EO15041 775 aa23.33■■□□□ 1.33
PSPC1-203ENST00000471658 LTBP3Q9NS15 1303 aa23.33■■□□□ 1.33
PSPC1-203ENST00000471658 GPR162Q16538 588 aa23.33■■□□□ 1.32
PSPC1-203ENST00000471658 CNTROBQ8N137 903 aa23.33■■□□□ 1.32
PSPC1-203ENST00000471658 EVI5LQ96CN4 794 aa23.33■■□□□ 1.32
PSPC1-203ENST00000471658 YDJCA8MPS7 323 aa23.32■■□□□ 1.32
PSPC1-203ENST00000471658 CHGBP05060 677 aa23.32■■□□□ 1.32
PSPC1-203ENST00000471658 GTF2IP78347 998 aa23.32■■□□□ 1.32
PSPC1-203ENST00000471658 VPS33BQ9H267 617 aa23.32■■□□□ 1.32
PSPC1-203ENST00000471658 CHD4Q14839 1912 aa23.32■■□□□ 1.32
PSPC1-203ENST00000471658 FBXW7Q969H0 707 aa23.31■■□□□ 1.32
PSPC1-203ENST00000471658 ZBTB22O15209 634 aa23.3■■□□□ 1.32
PSPC1-203ENST00000471658 PODNQ7Z5L7 613 aa23.3■■□□□ 1.32
PSPC1-203ENST00000471658 SLFNL1Q499Z3 407 aa23.3■■□□□ 1.32
PSPC1-203ENST00000471658 KBTBD3Q8NAB2 608 aa23.3■■□□□ 1.32
PSPC1-203ENST00000471658 FSD1Q9BTV5 496 aa23.3■■□□□ 1.32
PSPC1-203ENST00000471658 MXD3Q9BW11 206 aa23.3■■□□□ 1.32
PSPC1-203ENST00000471658 ABCF2Q9UG63 623 aa23.3■■□□□ 1.32
PSPC1-203ENST00000471658 GRIK5Q16478 980 aa23.29■■□□□ 1.32
PSPC1-203ENST00000471658 TTLL5Q6EMB2 1281 aa23.29■■□□□ 1.32
PSPC1-203ENST00000471658 FAM205AQ6ZU69 1335 aa23.28■■□□□ 1.32
PSPC1-203ENST00000471658 NIM1KQ8IY84 436 aa23.28■■□□□ 1.32
PSPC1-203ENST00000471658 PDS5AQ29RF7 1337 aaKnown RBP23.28■■□□□ 1.32
PSPC1-203ENST00000471658 UTRNP46939 3433 aa23.28■■□□□ 1.32
PSPC1-203ENST00000471658 TTF1Q15361 905 aaPredicted RBP23.27■■□□□ 1.32
PSPC1-203ENST00000471658 IDH1O75874 414 aaKnown RBP23.26■■□□□ 1.31
PSPC1-203ENST00000471658 WDR66Q8TBY9 1149 aa23.26■■□□□ 1.31
PSPC1-203ENST00000471658 ZNRF3Q9ULT6 936 aa23.26■■□□□ 1.31
PSPC1-203ENST00000471658 MYH13Q9UKX3 1938 aa23.26■■□□□ 1.31
PSPC1-203ENST00000471658 SCN9AQ15858 1988 aa23.26■■□□□ 1.31
PSPC1-203ENST00000471658 RAD17O75943 681 aa23.26■■□□□ 1.31
PSPC1-203ENST00000471658 CERS5Q8N5B7 392 aa23.26■■□□□ 1.31
PSPC1-203ENST00000471658 JDP2Q8WYK2 163 aa23.26■■□□□ 1.31
PSPC1-203ENST00000471658 LRP2BPQ9P2M1 347 aa23.26■■□□□ 1.31
PSPC1-203ENST00000471658 MYO5AQ9Y4I1 1855 aaKnown RBP23.25■■□□□ 1.31
PSPC1-203ENST00000471658 CHMLP26374 656 aa23.25■■□□□ 1.31
PSPC1-203ENST00000471658 PRDX5P30044 214 aa23.25■■□□□ 1.31
PSPC1-203ENST00000471658 USP17L3A6NCW0 530 aa23.24■■□□□ 1.31
PSPC1-203ENST00000471658 USP17L4A6NCW7 530 aa23.24■■□□□ 1.31
PSPC1-203ENST00000471658 CDC45O75419 566 aa23.24■■□□□ 1.31
PSPC1-203ENST00000471658 LMNB1P20700 586 aa23.24■■□□□ 1.31
PSPC1-203ENST00000471658 MFSD14BQ5SR56 506 aa23.24■■□□□ 1.31
PSPC1-203ENST00000471658 USP17L1Q7RTZ2 530 aa23.24■■□□□ 1.31
PSPC1-203ENST00000471658 RAI14Q9P0K7 980 aa23.24■■□□□ 1.31
PSPC1-203ENST00000471658 SALL1Q9NSC2 1324 aa23.24■■□□□ 1.31
PSPC1-203ENST00000471658 C8orf34Q49A92 452 aa23.23■■□□□ 1.31
PSPC1-203ENST00000471658 DACT2Q5SW24 774 aa23.23■■□□□ 1.31
PSPC1-203ENST00000471658 STRIP1Q5VSL9 837 aa23.23■■□□□ 1.31
PSPC1-203ENST00000471658 ZNF384Q8TF68 577 aa23.23■■□□□ 1.31
PSPC1-203ENST00000471658 CCDC88AQ3V6T2 1871 aa23.22■■□□□ 1.31
PSPC1-203ENST00000471658 CXCL9Q07325 125 aa23.22■■□□□ 1.31
PSPC1-203ENST00000471658 SLC9C2Q5TAH2 1124 aa23.22■■□□□ 1.31
PSPC1-203ENST00000471658 ERICH6Q7L0X2 663 aa23.22■■□□□ 1.31
PSPC1-203ENST00000471658 FAM227BQ96M60 508 aa23.22■■□□□ 1.31
PSPC1-203ENST00000471658 AK9Q5TCS8 1911 aa23.22■■□□□ 1.31
PSPC1-203ENST00000471658 PSMD14O00487 310 aa23.22■■□□□ 1.31
PSPC1-203ENST00000471658 RNF113AO15541 343 aaKnown RBP23.22■■□□□ 1.31
PSPC1-203ENST00000471658 MAP3K12Q12852 859 aa23.22■■□□□ 1.31
PSPC1-203ENST00000471658 TBC1D22AQ8WUA7 517 aa23.22■■□□□ 1.31
PSPC1-203ENST00000471658 GRIN3BO60391 1043 aa23.21■■□□□ 1.31
PSPC1-203ENST00000471658 LDHBP07195 334 aaKnown RBP23.21■■□□□ 1.31
PSPC1-203ENST00000471658 PDE6AP16499 860 aa23.21■■□□□ 1.31
PSPC1-203ENST00000471658 ADD2P35612 726 aa23.21■■□□□ 1.31
PSPC1-203ENST00000471658 NMIQ13287 307 aaPredicted RBP23.21■■□□□ 1.31
PSPC1-203ENST00000471658 MAGEB6Q8N7X4 407 aa23.21■■□□□ 1.31
PSPC1-203ENST00000471658 IL25Q9H293 177 aa23.21■■□□□ 1.31
PSPC1-203ENST00000471658 RNF181Q9P0P0 153 aa23.21■■□□□ 1.31
PSPC1-203ENST00000471658 F8W031 263 aaPredicted RBP23.2■■□□□ 1.3
PSPC1-203ENST00000471658 MECOMQ03112 1051 aa23.2■■□□□ 1.3
PSPC1-203ENST00000471658 C9orf131Q5VYM1 1079 aa23.2■■□□□ 1.3
PSPC1-203ENST00000471658 CWC27Q6UX04 472 aaKnown RBP23.2■■□□□ 1.3
PSPC1-203ENST00000471658 ZGPATQ8N5A5 531 aaKnown RBP23.2■■□□□ 1.3
PSPC1-203ENST00000471658 SEC62Q99442 399 aaKnown RBP23.2■■□□□ 1.3
PSPC1-203ENST00000471658 DIAPH3Q9NSV4 1193 aa23.2■■□□□ 1.3
PSPC1-203ENST00000471658 ZNF532Q9HCE3 1301 aa23.19■■□□□ 1.3
PSPC1-203ENST00000471658 A0A0D9SFI3 127 aa23.19■■□□□ 1.3
PSPC1-203ENST00000471658 TCRBV5S4A2TA0A5A2 114 aa23.19■■□□□ 1.3
PSPC1-203ENST00000471658 FZD9O00144 591 aa23.19■■□□□ 1.3
PSPC1-203ENST00000471658 SPTY2D1Q68D10 685 aaPredicted RBP23.19■■□□□ 1.3
PSPC1-203ENST00000471658 NSUN4Q96CB9 384 aaKnown RBP23.19■■□□□ 1.3
PSPC1-203ENST00000471658 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.19■■□□□ 1.3
PSPC1-203ENST00000471658 SBF1O95248 1867 aa23.19■■□□□ 1.3
PSPC1-203ENST00000471658 DOCK2Q92608 1830 aa23.19■■□□□ 1.3
PSPC1-203ENST00000471658 ZNF646O15015 1829 aaPredicted RBP23.19■■□□□ 1.3
PSPC1-203ENST00000471658 VIL1P09327 827 aaKnown RBP23.19■■□□□ 1.3
PSPC1-203ENST00000471658 CIAPIN1Q6FI81 312 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms