RNA–Protein interactions for RNA: ENST00000471440.6

CFHR3-205, Transcript of complement factor H related 3, humanhuman

TSL 1 (best) BASIC

Gene CFHR3, Length 1,965 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-205ENST00000471440 MARK1Q9P0L2 795 aa6.33□□□□□ -1.4
CFHR3-205ENST00000471440 KLHL42Q9P2K6 505 aa6.33□□□□□ -1.4
CFHR3-205ENST00000471440 NSFL1CQ9UNZ2 370 aaKnown RBP6.33□□□□□ -1.4
CFHR3-205ENST00000471440 MRPL42Q9Y6G3 142 aaKnown RBP6.33□□□□□ -1.4
CFHR3-205ENST00000471440 PREX2Q70Z35 1606 aa6.33□□□□□ -1.4
CFHR3-205ENST00000471440 KIAA1107Q9UPP5 1409 aa6.32□□□□□ -1.4
CFHR3-205ENST00000471440 PPRC1Q5VV67 1664 aaKnown RBP6.32□□□□□ -1.4
CFHR3-205ENST00000471440 ITSN2Q9NZM3 1697 aa6.32□□□□□ -1.4
CFHR3-205ENST00000471440 CDC42BPAQ5VT25 1732 aa6.32□□□□□ -1.4
CFHR3-205ENST00000471440 PNMA6FA0A0J9YX94 578 aa6.32□□□□□ -1.4
CFHR3-205ENST00000471440 C2CD2LO14523 706 aa6.32□□□□□ -1.4
CFHR3-205ENST00000471440 SFSWAPQ12872 951 aaKnown RBP6.32□□□□□ -1.4
CFHR3-205ENST00000471440 BMS1Q14692 1282 aaKnown RBP6.32□□□□□ -1.4
CFHR3-205ENST00000471440 BEND7Q8N7W2 519 aaPredicted RBP6.32□□□□□ -1.4
CFHR3-205ENST00000471440 CDC42BPBQ9Y5S2 1711 aa6.32□□□□□ -1.4
CFHR3-205ENST00000471440 IDH3AP50213 366 aa6.31□□□□□ -1.4
CFHR3-205ENST00000471440 LAMC2Q13753 1193 aa6.31□□□□□ -1.4
CFHR3-205ENST00000471440 PLA2G4EQ3MJ16 856 aa6.31□□□□□ -1.4
CFHR3-205ENST00000471440 NOL8Q76FK4 1167 aaKnown RBP6.31□□□□□ -1.4
CFHR3-205ENST00000471440 IFT43Q96FT9 208 aa6.31□□□□□ -1.4
CFHR3-205ENST00000471440 PSMG3-AS1Q96PY0 264 aa6.31□□□□□ -1.4
CFHR3-205ENST00000471440 SPOCK3Q9BQ16 436 aa6.31□□□□□ -1.4
CFHR3-205ENST00000471440 INPP5FQ9Y2H2 1132 aa6.31□□□□□ -1.4
CFHR3-205ENST00000471440 SCAPERQ9BY12 1400 aa6.31□□□□□ -1.4
CFHR3-205ENST00000471440 DENND4BO75064 1496 aaPredicted RBP6.31□□□□□ -1.4
CFHR3-205ENST00000471440 ADGRL1O94910 1474 aa6.31□□□□□ -1.4
CFHR3-205ENST00000471440 FGD6Q6ZV73 1430 aa6.31□□□□□ -1.4
CFHR3-205ENST00000471440 GNA15P30679 374 aa6.31□□□□□ -1.4
CFHR3-205ENST00000471440 MAP2K3P46734 347 aa6.31□□□□□ -1.4
CFHR3-205ENST00000471440 ARID5AQ03989 594 aa6.31□□□□□ -1.4
CFHR3-205ENST00000471440 FAM182BQ5T319 152 aa6.31□□□□□ -1.4
CFHR3-205ENST00000471440 ETFBKMTQ8IXQ9 262 aa6.31□□□□□ -1.4
CFHR3-205ENST00000471440 OSBPL2Q9H1P3 480 aa6.31□□□□□ -1.4
CFHR3-205ENST00000471440 STIM2Q9P246 746 aa6.31□□□□□ -1.4
CFHR3-205ENST00000471440 HNRNPMP52272 730 aaKnown RBP eCLIP6.3□□□□□ -1.4
CFHR3-205ENST00000471440 TREML1Q86YW5 311 aa6.3□□□□□ -1.4
CFHR3-205ENST00000471440 GJD3Q8N144 294 aa6.3□□□□□ -1.4
CFHR3-205ENST00000471440 GALNT6Q8NCL4 622 aa6.3□□□□□ -1.4
CFHR3-205ENST00000471440 CRELD1Q96HD1 420 aa6.3□□□□□ -1.4
CFHR3-205ENST00000471440 OXCT2Q9BYC2 517 aaPredicted RBP6.3□□□□□ -1.4
CFHR3-205ENST00000471440 SLC52A1Q9NWF4 448 aa6.3□□□□□ -1.4
CFHR3-205ENST00000471440 ZNF644Q9H582 1327 aaPredicted RBP6.3□□□□□ -1.4
CFHR3-205ENST00000471440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.3□□□□□ -1.4
CFHR3-205ENST00000471440 K7ELQ4 463 aaPredicted RBP6.29□□□□□ -1.4
CFHR3-205ENST00000471440 MICAL2O94851 1124 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 BRD2P25440 801 aaKnown RBP6.29□□□□□ -1.4
CFHR3-205ENST00000471440 KCNQ4P56696 695 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 ORC1Q13415 861 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 AAMPQ13685 434 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 PODNQ7Z5L7 613 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 KCNB2Q92953 911 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 ACDQ96AP0 544 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 DCAF5Q96JK2 942 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 KDM6BO15054 1643 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 ZNF518AQ6AHZ1 1483 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 COL17A1Q9UMD9 1497 aaPredicted RBP6.29□□□□□ -1.4
CFHR3-205ENST00000471440 ABCC1P33527 1531 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 RAPGEF3O95398 923 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 TSPY4P0CV99 314 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 TSPY10P0CW01 314 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 GRNP28799 593 aaKnown RBP6.29□□□□□ -1.4
CFHR3-205ENST00000471440 INPP5BP32019 993 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 ARSDP51689 593 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 PTPROQ16827 1216 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 RAB44Q7Z6P3 723 aaPredicted RBP6.29□□□□□ -1.4
CFHR3-205ENST00000471440 AFAP1Q8N556 730 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 SLC30A3Q99726 388 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 POLIQ9UNA4 740 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 KCNH4Q9UQ05 1017 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 SAMD9LQ8IVG5 1584 aa6.29□□□□□ -1.4
CFHR3-205ENST00000471440 POGZQ7Z3K3 1410 aa6.28□□□□□ -1.4
CFHR3-205ENST00000471440 CAMSAP2Q08AD1 1489 aa6.28□□□□□ -1.4
CFHR3-205ENST00000471440 TCOF1Q13428 1488 aaKnown RBP6.28□□□□□ -1.4
CFHR3-205ENST00000471440 MBD5Q9P267 1494 aa6.28□□□□□ -1.4
CFHR3-205ENST00000471440 MZF1P28698 734 aaPredicted RBP6.28□□□□□ -1.4
CFHR3-205ENST00000471440 SPEM2Q0P670 501 aa6.28□□□□□ -1.4
CFHR3-205ENST00000471440 GNL2Q13823 731 aaKnown RBP6.28□□□□□ -1.4
CFHR3-205ENST00000471440 FAM50AQ14320 339 aaKnown RBP6.28□□□□□ -1.4
CFHR3-205ENST00000471440 ZNF468Q5VIY5 522 aaPredicted RBP6.28□□□□□ -1.4
CFHR3-205ENST00000471440 LYPD4Q6UWN0 246 aa6.28□□□□□ -1.4
CFHR3-205ENST00000471440 USP48Q86UV5 1035 aa6.28□□□□□ -1.4
CFHR3-205ENST00000471440 PRR12Q9ULL5 1215 aa6.28□□□□□ -1.4
CFHR3-205ENST00000471440 USP20Q9Y2K6 914 aa6.28□□□□□ -1.4
CFHR3-205ENST00000471440 ARID4BQ4LE39 1312 aaPredicted RBP6.28□□□□□ -1.4
CFHR3-205ENST00000471440 RRBP1Q9P2E9 1410 aaKnown RBP6.28□□□□□ -1.4
CFHR3-205ENST00000471440 MAGI2Q86UL8 1455 aa6.28□□□□□ -1.4
CFHR3-205ENST00000471440 PTPN23Q9H3S7 1636 aa6.28□□□□□ -1.4
CFHR3-205ENST00000471440 CELA2BP08218 269 aaPredicted RBP6.27□□□□□ -1.4
CFHR3-205ENST00000471440 EPB42P16452 691 aa6.27□□□□□ -1.4
CFHR3-205ENST00000471440 GJA8P48165 433 aa6.27□□□□□ -1.4
CFHR3-205ENST00000471440 PCBP4P57723 403 aaKnown RBP6.27□□□□□ -1.4
CFHR3-205ENST00000471440 GGA1Q9UJY5 639 aa6.27□□□□□ -1.4
CFHR3-205ENST00000471440 SUGT1Q9Y2Z0 365 aa6.27□□□□□ -1.4
CFHR3-205ENST00000471440 PPME1Q9Y570 386 aa6.27□□□□□ -1.4
CFHR3-205ENST00000471440 AK5Q9Y6K8 562 aa6.27□□□□□ -1.4
CFHR3-205ENST00000471440 SPAG9O60271 1321 aaKnown RBP6.27□□□□□ -1.41
CFHR3-205ENST00000471440 TRAPPC8Q9Y2L5 1435 aa6.27□□□□□ -1.41
CFHR3-205ENST00000471440 ARHGEF12Q9NZN5 1544 aa6.27□□□□□ -1.41
CFHR3-205ENST00000471440 NEURL1BA8MQ27 555 aa6.27□□□□□ -1.41
CFHR3-205ENST00000471440 OPLAHO14841 1288 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms